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Spg013638 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg013638
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
Genome locationscaffold3:36412924..36416878
RNA-Seq ExpressionSpg013638
SyntenySpg013638
Gene Ontology termsGO:0009086 - methionine biosynthetic process (biological process)
GO:0032259 - methylation (biological process)
GO:0005829 - cytosol (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003871 - 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0008705 - methionine synthase activity (molecular function)
InterPro domainsIPR002629 - Cobalamin-independent methionine synthase MetE, C-terminal/archaeal
IPR038071 - UROD/MetE-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAN04645.1 cobalamin-independent methionine synthase [Senna obtusifolia]4.6e-1081.63Show/hide
Query:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKECQKQ
        ARLDAQQKKLNLPILPTTTI SFPQT ELR VRREYKANK S +E  K+
Subjt:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKECQKQ

GAU27948.1 hypothetical protein TSUD_146630 [Trifolium subterraneum]3.6e-1084.44Show/hide
Query:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKE
        ARLDAQQKKLNLP+LPTTTI SFPQTPELR VRREYKA K S +E
Subjt:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKE

MCH83820.1 methionine synthase [Trifolium medium]3.6e-1084.44Show/hide
Query:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKE
        ARLDAQQKKLNLP+LPTTTI SFPQTPELR VRREYKA K S +E
Subjt:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKE

PNY09876.1 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase-like protein [Trifolium pratense]3.6e-1084.44Show/hide
Query:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKE
        ARLDAQQKKLNLP+LPTTTI SFPQTPELR VRREYKA K S +E
Subjt:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKE

XP_028761322.1 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase-like [Prosopis alba]3.6e-1081.63Show/hide
Query:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKECQKQ
        ARLDAQQKKLNLPILPTTTI SFPQT ELR VRREYKANK S +E  K+
Subjt:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKECQKQ

TrEMBL top hitse value%identityAlignment
A0A2K3P3K7 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase1.7e-1084.44Show/hide
Query:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKE
        ARLDAQQKKLNLP+LPTTTI SFPQTPELR VRREYKA K S +E
Subjt:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKE

A0A2Z6M8V3 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase1.7e-1084.44Show/hide
Query:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKE
        ARLDAQQKKLNLP+LPTTTI SFPQTPELR VRREYKA K S +E
Subjt:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKE

A0A392M8K3 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (Fragment)1.7e-1084.44Show/hide
Query:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKE
        ARLDAQQKKLNLP+LPTTTI SFPQTPELR VRREYKA K S +E
Subjt:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKE

A0A7J7MYR6 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase2.2e-1084.44Show/hide
Query:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKE
        ARLDAQQK LNLPILPTTTI SFPQTP+LR VRREYKANK S +E
Subjt:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKE

M5AUD0 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase2.2e-1081.63Show/hide
Query:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKECQKQ
        ARLDAQQKKLNLPILPTTTI SFPQT ELR VRREYKANK S +E  K+
Subjt:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKECQKQ

SwissProt top hitse value%identityAlignment
O50008 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 16.7e-1279.17Show/hide
Query:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKECQK
        ARLDAQQKKLNLPILPTTTI SFPQT ELR VRREYKA K S ++  K
Subjt:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKECQK

P93263 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase8.8e-1279.17Show/hide
Query:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKECQK
        +RLDAQQKKLNLPILPTTTI SFPQT ELR VRREYKA K S +E  K
Subjt:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKECQK

Q2QLY4 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 28.8e-1282.22Show/hide
Query:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKE
        ARLDAQQKKLNLP+LPTTTI SFPQT ELR VRREYKA K S  E
Subjt:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKE

Q2QLY5 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 15.2e-1282.22Show/hide
Query:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKE
        ARLDAQQKKLNLP+LPTTTI SFPQT ELR VRREYKA K S +E
Subjt:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKE

Q9SRV5 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 28.8e-1279.17Show/hide
Query:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKECQK
        ARLDAQQKKLNLPILPTTTI SFPQT ELR VRREYKA K S ++  K
Subjt:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKECQK

Arabidopsis top hitse value%identityAlignment
AT3G03780.1 methionine synthase 26.3e-1379.17Show/hide
Query:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKECQK
        ARLDAQQKKLNLPILPTTTI SFPQT ELR VRREYKA K S ++  K
Subjt:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKECQK

AT3G03780.2 methionine synthase 26.3e-1379.17Show/hide
Query:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKECQK
        ARLDAQQKKLNLPILPTTTI SFPQT ELR VRREYKA K S ++  K
Subjt:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKECQK

AT3G03780.3 methionine synthase 26.3e-1379.17Show/hide
Query:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKECQK
        ARLDAQQKKLNLPILPTTTI SFPQT ELR VRREYKA K S ++  K
Subjt:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKECQK

AT5G17920.1 Cobalamin-independent synthase family protein4.8e-1379.17Show/hide
Query:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKECQK
        ARLDAQQKKLNLPILPTTTI SFPQT ELR VRREYKA K S ++  K
Subjt:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKECQK

AT5G17920.2 Cobalamin-independent synthase family protein4.8e-1379.17Show/hide
Query:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKECQK
        ARLDAQQKKLNLPILPTTTI SFPQT ELR VRREYKA K S ++  K
Subjt:  ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKECQK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCAAGACTTGATGCTCAACAGAAGAAGCTTAATCTTCCAATCCTTCCAACCACCACCATTGATTCCTTCCCTCAAACTCCTGAACTCAGGATGGTTCGTCGTGAATACAA
AGCTAACAAGCCATCCATCAAAGAGTGTCAAAAGCAAGGACAGTCTAGACAATGGAACAGACCCAAAAATCATTTTCTAGCATCAATGACTTCTCATCATTTGTGGCTCT
GTTGCAGTGGTAGTTTAGTTGATGACATGGTAGCTTTTCTTAGAAGTGTGAGCCACTCACTCAGTACCGTGGTTTGTACTAACCCACCATCAGATTTTGTAGGTGATGAG
GATTACTATGAGTTGGGTGATGCTGGGGAGGTTTGA
mRNA sequenceShow/hide mRNA sequence
GCAAGACTTGATGCTCAACAGAAGAAGCTTAATCTTCCAATCCTTCCAACCACCACCATTGATTCCTTCCCTCAAACTCCTGAACTCAGGATGGTTCGTCGTGAATACAA
AGCTAACAAGCCATCCATCAAAGAGTGTCAAAAGCAAGGACAGTCTAGACAATGGAACAGACCCAAAAATCATTTTCTAGCATCAATGACTTCTCATCATTTGTGGCTCT
GTTGCAGTGGTAGTTTAGTTGATGACATGGTAGCTTTTCTTAGAAGTGTGAGCCACTCACTCAGTACCGTGGTTTGTACTAACCCACCATCAGATTTTGTAGGTGATGAG
GATTACTATGAGTTGGGTGATGCTGGGGAGGTTTGA
Protein sequenceShow/hide protein sequence
ARLDAQQKKLNLPILPTTTIDSFPQTPELRMVRREYKANKPSIKECQKQGQSRQWNRPKNHFLASMTSHHLWLCCSGSLVDDMVAFLRSVSHSLSTVVCTNPPSDFVGDE
DYYELGDAGEV