CuGenDBv2

Gene ID	Spg013670
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RWD domain-containing protein 1
Genome location	scaffold3:48867778..48872181
RNA-Seq Expression	Spg013670
Synteny	Spg013670
Gene Ontology terms	GO:0002181 - cytoplasmic translation (biological process) GO:0005844 - polysome (cellular component)
InterPro domains	IPR040213 - GIR2-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0059445.1 RWD domain-containing protein 1 isoform X1 [Cucumis melo var. makuwa]

2.9e-41

72.03

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Query:  IIVPHGEPVTLDTFLAWRERFEAEMALERANRTNSITSNTTSLLITCSEATPSNHKLSYFGGGIMPESALTAPKEKKLSGRQWFESGRASGKGAAPVAEG
        +IVPHGEPVTLDTFLAWRERFEAE+ALERA                                 IMPESALTAPKEKKL+GRQWFESGRASGKGAAPV EG
Subjt:  IIVPHGEPVTLDTFLAWRERFEAEMALERANRTNSITSNTTSLLITCSEATPSNHKLSYFGGGIMPESALTAPKEKKLSGRQWFESGRASGKGAAPVAEG

Query:  SDEEDEEDIDFDEDDFE-DDEDDMLEHYLAEKSDSSSHSSRRP
        SDE+DEEDIDFDEDDFE DDE+DMLEHYLAEKSDSSSHSSRRP
Subjt:  SDEEDEEDIDFDEDDFE-DDEDDMLEHYLAEKSDSSSHSSRRP

XP_008462371.1 PREDICTED: RWD domain-containing protein 1 isoform X1 [Cucumis melo]

2.9e-41

72.03

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Query:  IIVPHGEPVTLDTFLAWRERFEAEMALERANRTNSITSNTTSLLITCSEATPSNHKLSYFGGGIMPESALTAPKEKKLSGRQWFESGRASGKGAAPVAEG
        +IVPHGEPVTLDTFLAWRERFEAE+ALERA                                 IMPESALTAPKEKKL+GRQWFESGRASGKGAAPV EG
Subjt:  IIVPHGEPVTLDTFLAWRERFEAEMALERANRTNSITSNTTSLLITCSEATPSNHKLSYFGGGIMPESALTAPKEKKLSGRQWFESGRASGKGAAPVAEG

Query:  SDEEDEEDIDFDEDDFE-DDEDDMLEHYLAEKSDSSSHSSRRP
        SDE+DEEDIDFDEDDFE DDE+DMLEHYLAEKSDSSSHSSRRP
Subjt:  SDEEDEEDIDFDEDDFE-DDEDDMLEHYLAEKSDSSSHSSRRP

XP_008462372.1 PREDICTED: RWD domain-containing protein 1 isoform X2 [Cucumis melo]

2.9e-41

72.03

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Query:  IIVPHGEPVTLDTFLAWRERFEAEMALERANRTNSITSNTTSLLITCSEATPSNHKLSYFGGGIMPESALTAPKEKKLSGRQWFESGRASGKGAAPVAEG
        +IVPHGEPVTLDTFLAWRERFEAE+ALERA                                 IMPESALTAPKEKKL+GRQWFESGRASGKGAAPV EG
Subjt:  IIVPHGEPVTLDTFLAWRERFEAEMALERANRTNSITSNTTSLLITCSEATPSNHKLSYFGGGIMPESALTAPKEKKLSGRQWFESGRASGKGAAPVAEG

Query:  SDEEDEEDIDFDEDDFE-DDEDDMLEHYLAEKSDSSSHSSRRP
        SDE+DEEDIDFDEDDFE DDE+DMLEHYLAEKSDSSSHSSRRP
Subjt:  SDEEDEEDIDFDEDDFE-DDEDDMLEHYLAEKSDSSSHSSRRP

XP_031744377.1 RWD domain-containing protein 1 isoform X2 [Cucumis sativus]

2.9e-41

72.03

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Query:  IIVPHGEPVTLDTFLAWRERFEAEMALERANRTNSITSNTTSLLITCSEATPSNHKLSYFGGGIMPESALTAPKEKKLSGRQWFESGRASGKGAAPVAEG
        +IVPHGEPVTLDTFLAWRERFEAE+ALERA                                 IMPESALTAPKEKKL+GRQWFESGRASGKGAAPV EG
Subjt:  IIVPHGEPVTLDTFLAWRERFEAEMALERANRTNSITSNTTSLLITCSEATPSNHKLSYFGGGIMPESALTAPKEKKLSGRQWFESGRASGKGAAPVAEG

Query:  SDEEDEEDIDFDEDDFE-DDEDDMLEHYLAEKSDSSSHSSRRP
        SDE+DEEDIDFDEDDFE DDE+DMLEHYLAEKSDSSSHSSRRP
Subjt:  SDEEDEEDIDFDEDDFE-DDEDDMLEHYLAEKSDSSSHSSRRP

XP_031744378.1 RWD domain-containing protein 1 isoform X3 [Cucumis sativus]

2.9e-41

72.03

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Query:  IIVPHGEPVTLDTFLAWRERFEAEMALERANRTNSITSNTTSLLITCSEATPSNHKLSYFGGGIMPESALTAPKEKKLSGRQWFESGRASGKGAAPVAEG
        +IVPHGEPVTLDTFLAWRERFEAE+ALERA                                 IMPESALTAPKEKKL+GRQWFESGRASGKGAAPV EG
Subjt:  IIVPHGEPVTLDTFLAWRERFEAEMALERANRTNSITSNTTSLLITCSEATPSNHKLSYFGGGIMPESALTAPKEKKLSGRQWFESGRASGKGAAPVAEG

Query:  SDEEDEEDIDFDEDDFE-DDEDDMLEHYLAEKSDSSSHSSRRP
        SDE+DEEDIDFDEDDFE DDE+DMLEHYLAEKSDSSSHSSRRP
Subjt:  SDEEDEEDIDFDEDDFE-DDEDDMLEHYLAEKSDSSSHSSRRP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K775 RWD domain-containing protein

1.4e-41

72.03

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Query:  IIVPHGEPVTLDTFLAWRERFEAEMALERANRTNSITSNTTSLLITCSEATPSNHKLSYFGGGIMPESALTAPKEKKLSGRQWFESGRASGKGAAPVAEG
        +IVPHGEPVTLDTFLAWRERFEAE+ALERA                                 IMPESALTAPKEKKL+GRQWFESGRASGKGAAPV EG
Subjt:  IIVPHGEPVTLDTFLAWRERFEAEMALERANRTNSITSNTTSLLITCSEATPSNHKLSYFGGGIMPESALTAPKEKKLSGRQWFESGRASGKGAAPVAEG

Query:  SDEEDEEDIDFDEDDFE-DDEDDMLEHYLAEKSDSSSHSSRRP
        SDE+DEEDIDFDEDDFE DDE+DMLEHYLAEKSDSSSHSSRRP
Subjt:  SDEEDEEDIDFDEDDFE-DDEDDMLEHYLAEKSDSSSHSSRRP

A0A1S3CGU4 RWD domain-containing protein 1 isoform X1

1.4e-41

72.03

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Query:  IIVPHGEPVTLDTFLAWRERFEAEMALERANRTNSITSNTTSLLITCSEATPSNHKLSYFGGGIMPESALTAPKEKKLSGRQWFESGRASGKGAAPVAEG
        +IVPHGEPVTLDTFLAWRERFEAE+ALERA                                 IMPESALTAPKEKKL+GRQWFESGRASGKGAAPV EG
Subjt:  IIVPHGEPVTLDTFLAWRERFEAEMALERANRTNSITSNTTSLLITCSEATPSNHKLSYFGGGIMPESALTAPKEKKLSGRQWFESGRASGKGAAPVAEG

Query:  SDEEDEEDIDFDEDDFE-DDEDDMLEHYLAEKSDSSSHSSRRP
        SDE+DEEDIDFDEDDFE DDE+DMLEHYLAEKSDSSSHSSRRP
Subjt:  SDEEDEEDIDFDEDDFE-DDEDDMLEHYLAEKSDSSSHSSRRP

A0A1S3CGV6 RWD domain-containing protein 1 isoform X2

1.4e-41

72.03

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Query:  IIVPHGEPVTLDTFLAWRERFEAEMALERANRTNSITSNTTSLLITCSEATPSNHKLSYFGGGIMPESALTAPKEKKLSGRQWFESGRASGKGAAPVAEG
        +IVPHGEPVTLDTFLAWRERFEAE+ALERA                                 IMPESALTAPKEKKL+GRQWFESGRASGKGAAPV EG
Subjt:  IIVPHGEPVTLDTFLAWRERFEAEMALERANRTNSITSNTTSLLITCSEATPSNHKLSYFGGGIMPESALTAPKEKKLSGRQWFESGRASGKGAAPVAEG

Query:  SDEEDEEDIDFDEDDFE-DDEDDMLEHYLAEKSDSSSHSSRRP
        SDE+DEEDIDFDEDDFE DDE+DMLEHYLAEKSDSSSHSSRRP
Subjt:  SDEEDEEDIDFDEDDFE-DDEDDMLEHYLAEKSDSSSHSSRRP

A0A5A7V0T4 RWD domain-containing protein 1 isoform X1

1.4e-41

72.03

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Query:  IIVPHGEPVTLDTFLAWRERFEAEMALERANRTNSITSNTTSLLITCSEATPSNHKLSYFGGGIMPESALTAPKEKKLSGRQWFESGRASGKGAAPVAEG
        +IVPHGEPVTLDTFLAWRERFEAE+ALERA                                 IMPESALTAPKEKKL+GRQWFESGRASGKGAAPV EG
Subjt:  IIVPHGEPVTLDTFLAWRERFEAEMALERANRTNSITSNTTSLLITCSEATPSNHKLSYFGGGIMPESALTAPKEKKLSGRQWFESGRASGKGAAPVAEG

Query:  SDEEDEEDIDFDEDDFE-DDEDDMLEHYLAEKSDSSSHSSRRP
        SDE+DEEDIDFDEDDFE DDE+DMLEHYLAEKSDSSSHSSRRP
Subjt:  SDEEDEEDIDFDEDDFE-DDEDDMLEHYLAEKSDSSSHSSRRP

A0A6J1D9D4 RWD domain-containing protein 1

1.2e-40

72.34

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Query:  IIVPHGEPVTLDTFLAWRERFEAEMALERANRTNSITSNTTSLLITCSEATPSNHKLSYFGGGIMPESALTAPKEKKLSGRQWFESGRASGKGAAPVAEG
        +IVPHGEPVTLDTFLAWRERFEAEMALERA                                 IMPESALTAPKEKKLSGRQWFESGRAS KGAA V E 
Subjt:  IIVPHGEPVTLDTFLAWRERFEAEMALERANRTNSITSNTTSLLITCSEATPSNHKLSYFGGGIMPESALTAPKEKKLSGRQWFESGRASGKGAAPVAEG

Query:  SDEEDEEDIDFDEDDFEDDEDDMLEHYLAEKSDSSSHSSRR
        SDEEDEEDIDFDEDDFEDDEDDMLEHYLAEK DSSSHSSRR
Subjt:  SDEEDEEDIDFDEDDFEDDEDDMLEHYLAEKSDSSSHSSRR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G51730.1 Ubiquitin-conjugating enzyme family protein

8.2e-34

58.45

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Query:  QIIVPHGEPVTLDTFLAWRERFEAEMALERANRTNSITSNTTSLLITCSEATPSNHKLSYFGGGIMPESALTAPKEKKLSGRQWFESGRASGKGAAPVAE
        ++IVPHGEPVTL+TFLAWRER+EAE+ALERA                                 +MPESALTAPKEKKL+GRQWFESGR  G+G   +A+
Subjt:  QIIVPHGEPVTLDTFLAWRERFEAEMALERANRTNSITSNTTSLLITCSEATPSNHKLSYFGGGIMPESALTAPKEKKLSGRQWFESGRASGKGAAPVAE

Query:  GSD-EEDEEDIDFDEDDFEDDEDDMLEHYLAEKSDSSSHSSR
          D EEDEEDIDF+++DFEDDE+DMLEHYLAEKSDSS+  +R
Subjt:  GSD-EEDEEDIDFDEDDFEDDEDDMLEHYLAEKSDSSSHSSR

Sequences

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CDS sequence

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ATGAATTCATTTACATTCTACTTCCCATTGAACTCACAGATAATTGTACCACATGGAGAACCTGTCACCCTTGACACATTTTTAGCTTGGAGAGAAAGATTCGAAGCAGA
GATGGCATTAGAACGAGCCAACCGGACCAATTCTATTACCAGTAATACCACTAGCCTTCTTATCACTTGCTCAGAGGCCACCCCTTCAAACCATAAGCTAAGTTACTTTG
GTGGTGGGATAATGCCCGAATCAGCCCTTACTGCTCCTAAGGAAAAGAAACTTTCTGGTAGACAGTGGTTTGAGAGTGGAAGAGCTTCTGGGAAAGGTGCAGCCCCAGTT
GCTGAAGGATCTGACGAAGAAGACGAGGAAGATATTGACTTTGATGAGGATGATTTTGAAGATGACGAGGACGACATGCTTGAGCACTACCTAGCTGAGAAATCAGATTC
ATCCTCACACTCGTCCAGAAGGCCTTAG

mRNA sequence

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Protein sequence

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MNSFTFYFPLNSQIIVPHGEPVTLDTFLAWRERFEAEMALERANRTNSITSNTTSLLITCSEATPSNHKLSYFGGGIMPESALTAPKEKKLSGRQWFESGRASGKGAAPV
AEGSDEEDEEDIDFDEDDFEDDEDDMLEHYLAEKSDSSSHSSRRP

Spg013670 (gene) of Sponge gourd (cylindrica) v1 genome