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Spg013693 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg013693
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMADS-box transcription factor 8-like
Genome locationscaffold3:38403839..38404754
RNA-Seq ExpressionSpg013693
SyntenySpg013693
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002100 - Transcription factor, MADS-box
IPR033896 - MADS MEF2-like
IPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576135.1 Agamous-like MADS-box protein MADS4, partial [Cucurbita argyrosperma subsp. sororia]4.4e-2696.77Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNR
        MGRKKIEVKRIEDRCNRHVTFCKRR+GLIKKARELSVLCDVEVGLV+FTNRGRLYEFCSGNR
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNR

KAG7014654.1 Agamous-like MADS-box protein AGL3, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-2693.85Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCL
        MGRKKIEVKRIEDRCNRHVTFCKRR+GLIKKARELSVLCDVEVGLV+FTNRGRLYEFCSGNR  L
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCL

XP_022155416.1 MADS-box protein FLOWERING LOCUS C-like isoform X2 [Momordica charantia]3.7e-2584.29Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERF
        MGRKKIEVKRIED CNRHVTFCKRRSGLIKKARELSVLCDVE+GL++FTNRGRLYEFC GN    I+ER+
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERF

XP_023514206.1 MADS-box protein 04g005320-like [Cucurbita pepo subsp. pepo]3.7e-2585.71Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERF
        MGRKKIE+KRIED CNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSG+    I++R+
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERF

XP_023514717.1 MADS-box protein EJ2-like [Cucurbita pepo subsp. pepo]3.3e-2685.71Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERF
        MGRKKIEVKRIEDRCNRHVTFCKRR+GLIKKARELSVLCDVEVGLV+FTNRGRLYEFCSGN    +++R+
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERF

TrEMBL top hitse value%identityAlignment
A0A6J1DME3 MADS-box protein FLOWERING LOCUS C-like isoform X11.8e-2584.29Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERF
        MGRKKIEVKRIED CNRHVTFCKRRSGLIKKARELSVLCDVE+GL++FTNRGRLYEFC GN    I+ER+
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERF

A0A6J1DPA0 MADS-box transcription factor 8-like isoform X31.8e-2584.29Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERF
        MGRKKIEVKRIED CNRHVTFCKRRSGLIKKARELSVLCDVE+GL++FTNRGRLYEFC GN    I+ER+
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERF

A0A6J1DRL9 MADS-box protein FLOWERING LOCUS C-like isoform X21.8e-2584.29Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERF
        MGRKKIEVKRIED CNRHVTFCKRRSGLIKKARELSVLCDVE+GL++FTNRGRLYEFC GN    I+ER+
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERF

A0A6J1H7I9 truncated transcription factor CAULIFLOWER D-like1.8e-2585.71Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERF
        MGRKKIE+KRIED CNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSG+    I++R+
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERF

A0A6J1KPU7 MADS-box protein 04g005320-like2.3e-2584.29Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERF
        MGRKKIE+KRIED CNRHVTFCKRRSGLIKKARELSVLCDVEVGLV+FTNRGRLYEFCSG+    I++R+
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERF

SwissProt top hitse value%identityAlignment
O04067 Agamous-like MADS-box protein AGL9 homolog1.1e-1961.11Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERFSR
        MGR ++E+KRIE++ NR VTF KRR+GL+KKA ELSVLCD EV L++F+NRG+LYEFCS +     LER+ +
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERFSR

P29384 Developmental protein SEPALLATA 26.3e-2062.16Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERFSRKS
        MGR ++E+KRIE++ NR VTF KRR+GL+KKA ELSVLCD EV L+VF+NRG+LYEFCS +     LER+ + S
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERFSRKS

Q03489 Agamous-like MADS-box protein AGL9 homolog1.1e-1961.11Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERFSR
        MGR ++E+KRIE++ NR VTF KRR+GL+KKA ELSVLCD EV L++F+NRG+LYEFCS +     LER+ +
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERFSR

Q39685 MADS-box protein CMB12.2e-2057.14Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERFSR---KSLELSFPTLRSLSDF
        MGR ++E+KRIE++ NR VTF KRR+GL+KKA ELSVLCD EV L+VF+NRG+LYEFCS +     LER+ R    SLE S P+  + S +
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERFSR---KSLELSFPTLRSLSDF

Q9SAR1 MADS-box transcription factor 81.7e-2062.16Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERFSRKS
        MGR ++E+KRIE++ NR VTF KRR+GL+KKA ELSVLCD EV L++F+NRG+LYEFCSG      LER+ + S
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERFSRKS

Arabidopsis top hitse value%identityAlignment
AT1G24260.1 K-box region and MADS-box transcription factor family protein7.7e-2161.11Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERFSR
        MGR ++E+KRIE++ NR VTF KRR+GL+KKA ELSVLCD EV L++F+NRG+LYEFCS +     LER+ +
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERFSR

AT1G24260.2 K-box region and MADS-box transcription factor family protein7.7e-2161.11Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERFSR
        MGR ++E+KRIE++ NR VTF KRR+GL+KKA ELSVLCD EV L++F+NRG+LYEFCS +     LER+ +
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERFSR

AT1G24260.3 K-box region and MADS-box transcription factor family protein7.7e-2161.11Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERFSR
        MGR ++E+KRIE++ NR VTF KRR+GL+KKA ELSVLCD EV L++F+NRG+LYEFCS +     LER+ +
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERFSR

AT3G02310.1 K-box region and MADS-box transcription factor family protein4.5e-2162.16Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERFSRKS
        MGR ++E+KRIE++ NR VTF KRR+GL+KKA ELSVLCD EV L+VF+NRG+LYEFCS +     LER+ + S
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERFSRKS

AT5G15800.1 K-box region and MADS-box transcription factor family protein7.7e-2159.46Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERFSRKS
        MGR ++E+KRIE++ NR VTF KRR+GL+KKA ELSVLCD EV L++F+NRG+LYEFCS +     L+R+ + S
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERFSRKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACGGAAGAAGATCGAGGTGAAGCGAATCGAAGATAGGTGTAATCGCCATGTGACTTTCTGCAAGAGAAGATCTGGATTGATCAAGAAGGCTCGTGAGCTCTCTGT
TCTGTGCGACGTTGAGGTCGGACTCGTCGTCTTCACCAACCGCGGCCGCCTCTATGAGTTTTGCAGCGGAAACAGGCGTTGTTTGATCTTAGAGAGATTTTCTCGGAAAT
CGTTGGAACTTAGTTTTCCGACGCTTCGTTCGCTCTCTGATTTCTTCCTGAATGTTTCTCTCGTCCGTCCCTGGGTTCCTACTCAGGATTTACGTGTTTTCTTTCTGCAG
CATATGCATATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGACGGAAGAAGATCGAGGTGAAGCGAATCGAAGATAGGTGTAATCGCCATGTGACTTTCTGCAAGAGAAGATCTGGATTGATCAAGAAGGCTCGTGAGCTCTCTGT
TCTGTGCGACGTTGAGGTCGGACTCGTCGTCTTCACCAACCGCGGCCGCCTCTATGAGTTTTGCAGCGGAAACAGGCGTTGTTTGATCTTAGAGAGATTTTCTCGGAAAT
CGTTGGAACTTAGTTTTCCGACGCTTCGTTCGCTCTCTGATTTCTTCCTGAATGTTTCTCTCGTCCGTCCCTGGGTTCCTACTCAGGATTTACGTGTTTTCTTTCTGCAG
CATATGCATATGTGA
Protein sequenceShow/hide protein sequence
MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRRCLILERFSRKSLELSFPTLRSLSDFFLNVSLVRPWVPTQDLRVFFLQ
HMHM