; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg013699 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg013699
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold3:44867696..44869567
RNA-Seq ExpressionSpg013699
SyntenySpg013699
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023874626.1 uncharacterized protein LOC111987155 [Quercus suber]1.9e-2148.18Show/hide
Query:  RKKRNTIRGLENDSGIWIQEPEGIMRQITDYFDHIFASRCPSPSEISSAIAGVGVSVSEEMNSRLLRPFLKEEVLLALKQIHPNKAPGPDGLSGAFFRQS
        R+++N I GL ND G+W+++ EGI R I DYF  IF S   +PS    +++ +   VSEEMN  LL  F  EEV +AL+Q+HP KAPGPDG+S  F+++ 
Subjt:  RKKRNTIRGLENDSGIWIQEPEGIMRQITDYFDHIFASRCPSPSEISSAIAGVGVSVSEEMNSRLLRPFLKEEVLLALKQIHPNKAPGPDGLSGAFFRQS

Query:  WDFVEADVLE
        W+ V+ DV+E
Subjt:  WDFVEADVLE

XP_024044510.1 uncharacterized protein LOC112100177 [Citrus clementina]4.0e-1944.04Show/hide
Query:  RKKRNTIRGLENDSGIWIQEPEGIMRQITDYFDHIFASRCPSPSEISSAIAGVGVSVSEEMNSRLLRPFLKEEVLLALKQIHPNKAPGPDGLSGAFFRQS
        R+K+N I+G+E+++G+W ++ E + R   DYF +IF +  PSP+++++A+  V V VS EMN++L + F KEE+  AL Q+ P KAPG DGL  AFF++ 
Subjt:  RKKRNTIRGLENDSGIWIQEPEGIMRQITDYFDHIFASRCPSPSEISSAIAGVGVSVSEEMNSRLLRPFLKEEVLLALKQIHPNKAPGPDGLSGAFFRQS

Query:  WDFVEADVL
        W  V   V+
Subjt:  WDFVEADVL

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]1.4e-1940.62Show/hide
Query:  RKKRNTIRGLENDSGIWIQEPEGIMRQITDYFDHIFASRCPSPSEISSAIAGVGVSVSEEMNSRLLRPFLKEEVLLALKQIHPNKAPGPDGLSGAFFRQS
        RK++N + G+END GIW++E + I  +I  +F  +F +  P+PS+I + + G+   V+ EMN +L +PF  E+V  AL  + P KAPGPDGL  AFF++ 
Subjt:  RKKRNTIRGLENDSGIWIQEPEGIMRQITDYFDHIFASRCPSPSEISSAIAGVGVSVSEEMNSRLLRPFLKEEVLLALKQIHPNKAPGPDGLSGAFFRQS

Query:  WDFVEADVLEPIYTWKASLNEVSSPAVV
        W  V   V   I T    LNE  +P+ +
Subjt:  WDFVEADVLEPIYTWKASLNEVSSPAVV

XP_030964220.1 uncharacterized protein LOC115985421 [Quercus lobata]1.1e-1945.54Show/hide
Query:  RKKRNTIRGLENDSGIWIQEPEGIMRQITDYFDHIFASRCPSPSEISSAIAGVGVSVSEEMNSRLLRPFLKEEVLLALKQIHPNKAPGPDGLSGAFFRQS
        RK++NTI GL ND GIW +  E I      YF  I+ +   SP+ I+  I+ +   V+EEMN  L + F  EEVL AL+Q+HPNKAPGPDG+S  FF   
Subjt:  RKKRNTIRGLENDSGIWIQEPEGIMRQITDYFDHIFASRCPSPSEISSAIAGVGVSVSEEMNSRLLRPFLKEEVLLALKQIHPNKAPGPDGLSGAFFRQS

Query:  WDFVEADVLEPI
        WD V ++++  +
Subjt:  WDFVEADVLEPI

XP_033147600.1 uncharacterized protein LOC103828837 [Brassica rapa]4.8e-2036.6Show/hide
Query:  RKKRNTIRGLENDSGIWIQEPEGIMRQITDYFDHIFASRCPSPSEISSAIAGVGVSVSEEMNSRLLRPFLKEEVLLALKQIHPNKAPGPDGLSGAFFRQS
        R+ RN I GL +++G W+ E  G+ + + DYFD +F+S   +P E  S +  +G S+S +MN  LLR   +EEV  AL  +HP KAPGPDG++  FF+ S
Subjt:  RKKRNTIRGLENDSGIWIQEPEGIMRQITDYFDHIFASRCPSPSEISSAIAGVGVSVSEEMNSRLLRPFLKEEVLLALKQIHPNKAPGPDGLSGAFFRQS

Query:  WDFVEADVLEPIYTWKASLNEVSSPAVVKGGREEEDCRGASIQLGKAGFYLGH
        W+ ++ DV+E         N+     +++  +E E   G  I   K+    GH
Subjt:  WDFVEADVLEPIYTWKASLNEVSSPAVVKGGREEEDCRGASIQLGKAGFYLGH

TrEMBL top hitse value%identityAlignment
A0A2N9ERY4 Uncharacterized protein6.3e-1844.17Show/hide
Query:  RKKRNTIRGLENDSGIWIQEPEGIMRQITDYFDHIFASRCPSPSEISSAIAGVGVSVSEEMNSRLLRPFLKEEVLLALKQIHPNKAPGPDGLSGAFFRQS
        RK+ NTI GL ++   W  +   I R   +YFD +FAS C  P  I S I  V   V+ EMN  L RPF  EEV +AL Q+HP+KAPGPDG+S  F+++ 
Subjt:  RKKRNTIRGLENDSGIWIQEPEGIMRQITDYFDHIFASRCPSPSEISSAIAGVGVSVSEEMNSRLLRPFLKEEVLLALKQIHPNKAPGPDGLSGAFFRQS

Query:  WDFVEADVLEPIYTWKASLN
        W  V  DV   +  +  S N
Subjt:  WDFVEADVLEPIYTWKASLN

A0A2N9G552 Uncharacterized protein6.3e-1841.28Show/hide
Query:  RKKRNTIRGLENDSGIWIQEPEGIMRQITDYFDHIFASRCPSPSEISSAIAGVGVSVSEEMNSRLLRPFLKEEVLLALKQIHPNKAPGPDGLSGAFFRQS
        R++ N IRGL +D+G+W  E   + +   +YF +IF S  P+   ++S + G+   V++EMN+ LL+ F ++EV  ALKQ++P KAPGPDG+S  F++  
Subjt:  RKKRNTIRGLENDSGIWIQEPEGIMRQITDYFDHIFASRCPSPSEISSAIAGVGVSVSEEMNSRLLRPFLKEEVLLALKQIHPNKAPGPDGLSGAFFRQS

Query:  WDFVEADVL
        W+ V  +VL
Subjt:  WDFVEADVL

F4NCJ0 Reverse transcriptase domain-containing protein7.4e-1944.55Show/hide
Query:  RKKRNTIRGLENDSGIWIQEPEGIMRQITDYFDHIFASRCPSPSEISSAIAGVGVSVSEEMNSRLLRPFLKEEVLLALKQIHPNKAPGPDGLSGAFFRQS
        RKKRN ++GL + SG W +E + I    TDYF  IF S  PS  +++  +  V   V+EE N+ LL+PF KEE+ +AL Q+HP KAPGPDG+   F+++ 
Subjt:  RKKRNTIRGLENDSGIWIQEPEGIMRQITDYFDHIFASRCPSPSEISSAIAGVGVSVSEEMNSRLLRPFLKEEVLLALKQIHPNKAPGPDGLSGAFFRQS

Query:  WDFVEADVLE
        W  +  DV +
Subjt:  WDFVEADVLE

M5W5K8 Uncharacterized protein1.8e-1741.96Show/hide
Query:  RKKRNTIRGLENDSGIWIQEPEGIMRQITDYFDHIFASRCPSPSEISSAIAGVGVSVSEEMNSRLLRPFLKEEVLLALKQIHPNKAPGPDGLSGAFFRQS
        R++RNTI  LE++ G W    +G+ + + +YF H+F+S     SE +  + GV   V+EEMN  LL  F  EE+ +AL Q+HP+KAPGPDG S  F+++ 
Subjt:  RKKRNTIRGLENDSGIWIQEPEGIMRQITDYFDHIFASRCPSPSEISSAIAGVGVSVSEEMNSRLLRPFLKEEVLLALKQIHPNKAPGPDGLSGAFFRQS

Query:  WDFVEADVLEPI
        W  V  DV+  +
Subjt:  WDFVEADVLEPI

M5WDR3 Reverse transcriptase domain-containing protein (Fragment)1.1e-1741.96Show/hide
Query:  RKKRNTIRGLENDSGIWIQEPEGIMRQITDYFDHIFASRCPSPSEISSAIAGVGVSVSEEMNSRLLRPFLKEEVLLALKQIHPNKAPGPDGLSGAFFRQS
        R++RNTI  LE++ G W    +G+ + + +YF H+F+S     SE +  + GV   V+EEMN  LL  F  EE+ +AL Q+HP+KAPGPDG S  F+++ 
Subjt:  RKKRNTIRGLENDSGIWIQEPEGIMRQITDYFDHIFASRCPSPSEISSAIAGVGVSVSEEMNSRLLRPFLKEEVLLALKQIHPNKAPGPDGLSGAFFRQS

Query:  WDFVEADVLEPI
        W  V  DV+  +
Subjt:  WDFVEADVLEPI

SwissProt top hitse value%identityAlignment
P14381 Transposon TX1 uncharacterized 149 kDa protein1.4e-0631.73Show/hide
Query:  RNTIRGLENDSGIWIQEPEGIMRQITDYFDHIFASRCPSPSEISSAIAGVGVSVSEEMNSRLLRPFLKEEVLLALKQIHPNKAPGPDGLSGAFFRQSWDF
        R  I  L  + G  +++PE I  +   ++ ++F+    SP        G+ V VSE    RL  P   +E+  AL+ +  NK+PG DGL+  FF+  WD 
Subjt:  RNTIRGLENDSGIWIQEPEGIMRQITDYFDHIFASRCPSPSEISSAIAGVGVSVSEEMNSRLLRPFLKEEVLLALKQIHPNKAPGPDGLSGAFFRQSWDF

Query:  VEAD
        +  D
Subjt:  VEAD

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein1.3e-0423.42Show/hide
Query:  RNTIRGLENDSGIWIQEPEGIMRQITDYFDHIFASRCP--SPSEISSAIAGVGVSVSEEMNSRLLRPFLKEEVLLALKQIHPNKAPGPDGLSGAFFRQSW
        +N I+ L  D  + ++    +   I  Y+ H+  S     +P  +           ++ + SRL      +E+  A+  +  NKAPGPD  +  FF +SW
Subjt:  RNTIRGLENDSGIWIQEPEGIMRQITDYFDHIFASRCP--SPSEISSAIAGVGVSVSEEMNSRLLRPFLKEEVLLALKQIHPNKAPGPDGLSGAFFRQSW

Query:  DFVEADVLEPI
          V+   +  +
Subjt:  DFVEADVLEPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAGAAGCGGAACACTATTCGGGGGCTAGAGAATGATTCTGGGATATGGATTCAGGAACCAGAGGGGATCATGAGGCAGATTACTGATTATTTTGATCACATCTT
TGCCTCGCGGTGTCCGTCCCCGAGTGAGATCAGCAGTGCGATTGCCGGTGTGGGGGTGTCCGTTAGTGAGGAGATGAATTCGCGATTGCTCCGTCCTTTCCTCAAGGAAG
AGGTACTGCTAGCTTTGAAGCAGATCCACCCCAATAAAGCGCCTGGTCCGGATGGTTTGTCGGGAGCGTTCTTCAGGCAGTCGTGGGATTTTGTGGAGGCAGATGTGCTG
GAGCCGATTTACACGTGGAAAGCTTCACTTAATGAGGTGTCAAGTCCAGCTGTTGTAAAAGGAGGAAGAGAAGAGGAGGACTGCCGTGGAGCTTCTATTCAGCTTGGGAA
AGCTGGATTTTATCTTGGGCACTTCTTCCTTAGCCTTTTCTTCTCATCTTTTATCTCCCTATTGATATTAGTTGTGGTAGAGGCTGAAAACATGTTGTGTATGAGCATTT
TCTGCCATATTGAACTTGTGTTGGTAGCTGTTTATGAACGAATTCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAAGAAGCGGAACACTATTCGGGGGCTAGAGAATGATTCTGGGATATGGATTCAGGAACCAGAGGGGATCATGAGGCAGATTACTGATTATTTTGATCACATCTT
TGCCTCGCGGTGTCCGTCCCCGAGTGAGATCAGCAGTGCGATTGCCGGTGTGGGGGTGTCCGTTAGTGAGGAGATGAATTCGCGATTGCTCCGTCCTTTCCTCAAGGAAG
AGGTACTGCTAGCTTTGAAGCAGATCCACCCCAATAAAGCGCCTGGTCCGGATGGTTTGTCGGGAGCGTTCTTCAGGCAGTCGTGGGATTTTGTGGAGGCAGATGTGCTG
GAGCCGATTTACACGTGGAAAGCTTCACTTAATGAGGTGTCAAGTCCAGCTGTTGTAAAAGGAGGAAGAGAAGAGGAGGACTGCCGTGGAGCTTCTATTCAGCTTGGGAA
AGCTGGATTTTATCTTGGGCACTTCTTCCTTAGCCTTTTCTTCTCATCTTTTATCTCCCTATTGATATTAGTTGTGGTAGAGGCTGAAAACATGTTGTGTATGAGCATTT
TCTGCCATATTGAACTTGTGTTGGTAGCTGTTTATGAACGAATTCCCTGA
Protein sequenceShow/hide protein sequence
MRKKRNTIRGLENDSGIWIQEPEGIMRQITDYFDHIFASRCPSPSEISSAIAGVGVSVSEEMNSRLLRPFLKEEVLLALKQIHPNKAPGPDGLSGAFFRQSWDFVEADVL
EPIYTWKASLNEVSSPAVVKGGREEEDCRGASIQLGKAGFYLGHFFLSLFFSSFISLLILVVVEAENMLCMSIFCHIELVLVAVYERIP