; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg013700 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg013700
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibosomal protein L37
Genome locationscaffold3:48134337..48136241
RNA-Seq ExpressionSpg013700
SyntenySpg013700
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001569 - Ribosomal protein L37e
IPR011331 - Ribosomal protein L37ae/L37e
IPR011332 - Zinc-binding ribosomal protein
IPR018267 - Ribosomal protein L37e, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RDX96890.1 60S ribosomal protein L37-3 [Mucuna pruriens]5.6e-4396.81Show/hide
Query:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA
        GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAAR RKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGT+AAPR KGAAASA
Subjt:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA

XP_004141772.1 60S ribosomal protein L37-3 [Cucumis sativus]1.5e-4397.87Show/hide
Query:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA
        GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAAR RKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGT+AAPRNKGAAASA
Subjt:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA

XP_019436434.1 PREDICTED: 60S ribosomal protein L37-3-like [Lupinus angustifolius]7.3e-4394.68Show/hide
Query:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA
        GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRC+ACA+PAAR+RKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGT+AAPRNKGAAA+A
Subjt:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA

XP_022964011.1 60S ribosomal protein L37-3-like [Cucurbita moschata]5.6e-4395.74Show/hide
Query:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA
        GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRC+ACAFPAAR RKYNWSVKAIRRKTTGTGRMRY+RHVPRRFKSGFREGT+AAPRNKGAAASA
Subjt:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA

XP_031252760.1 60S ribosomal protein L37-3 [Pistacia vera]7.3e-4396.81Show/hide
Query:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA
        GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRC+ACAFPAAR R YNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA
Subjt:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA

TrEMBL top hitse value%identityAlignment
A0A0A0K941 Ribosomal protein L377.1e-4497.87Show/hide
Query:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA
        GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAAR RKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGT+AAPRNKGAAASA
Subjt:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA

A0A1S3CGU0 Ribosomal protein L377.1e-4497.87Show/hide
Query:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA
        GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAAR RKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGT+AAPRNKGAAASA
Subjt:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA

A0A371H269 Ribosomal protein L372.7e-4396.81Show/hide
Query:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA
        GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAAR RKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGT+AAPR KGAAASA
Subjt:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA

A0A5D3BYC5 Ribosomal protein L377.1e-4497.87Show/hide
Query:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA
        GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAAR RKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGT+AAPRNKGAAASA
Subjt:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA

A0A6J1HHN6 Ribosomal protein L372.7e-4395.74Show/hide
Query:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA
        GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRC+ACAFPAAR RKYNWSVKAIRRKTTGTGRMRY+RHVPRRFKSGFREGT+AAPRNKGAAASA
Subjt:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA

SwissProt top hitse value%identityAlignment
Q43292 60S ribosomal protein L37-23.2e-4187.1Show/hide
Query:  KGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA
        KGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAAR R YNWSVKAIRRKTTGTGRMRYLR+VPRRFK+GFREGT+A PRNKG A+SA
Subjt:  KGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA

Q8LEM8 60S ribosomal protein L37-31.2e-4085.11Show/hide
Query:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA
        GKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAAR R YNWSVKAIRRKTTGTGRMRYLR+VPRRFK+GFREGT+A PR+K +A+SA
Subjt:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA

Q8LFH7 60S ribosomal protein L37-11.2e-4086.17Show/hide
Query:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA
        GKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAAR R YNWSVKAIRRKTTGTGRMRYLR+VPRRFK+ FREGTQA PRNK AA+S+
Subjt:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA

Q90YT1 60S ribosomal protein L371.1e-2866.67Show/hide
Query:  KGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA
        KGT SFGKRRNKTHTLC RCG +++HLQKS C  C +PA R RKYNWS KA RR TTGTGRMR+++ V RRF++GFREGT   PR    AAS+
Subjt:  KGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA

Q9VXX8 Probable 60S ribosomal protein L37-A1.5e-3071.11Show/hide
Query:  KGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAA
        KGT SFGKR NKTHTLC RCGR S+H+QKS CA C +PAA+LR YNWSVKA RRKTTGTGRM++L+ V RRF++GFREGTQA P+   A+
Subjt:  KGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAA

Arabidopsis top hitse value%identityAlignment
AT1G15250.1 Zinc-binding ribosomal protein family protein8.6e-4286.17Show/hide
Query:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA
        GKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAAR R YNWSVKAIRRKTTGTGRMRYLR+VPRRFK+ FREGTQA PRNK AA+S+
Subjt:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA

AT1G52300.1 Zinc-binding ribosomal protein family protein2.3e-4287.1Show/hide
Query:  KGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA
        KGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAAR R YNWSVKAIRRKTTGTGRMRYLR+VPRRFK+GFREGT+A PRNKG A+SA
Subjt:  KGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA

AT3G16080.1 Zinc-binding ribosomal protein family protein8.6e-4285.11Show/hide
Query:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA
        GKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAAR R YNWSVKAIRRKTTGTGRMRYLR+VPRRFK+GFREGT+A PR+K +A+SA
Subjt:  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTAGGAACTGAACGGAGGTGGAAGGACTCGACCTCGGGCATGGGCCTTGCTCGAGGCCAAGCTATGGGGTTGGGCGAGCCTTTCGGAAAGGGTACGGGCAGTTT
TGGTAAGAGGAGGAACAAGACCCATACTCTCTGCGTGCGGTGCGGCCGCCGCAGCTTCCATCTCCAGAAGAGCCGCTGTGCAGCATGTGCTTTCCCTGCTGCTCGCCTGC
GCAAATATAACTGGAGCGTGAAGGCAATTAGGAGAAAGACAACCGGAACTGGAAGGATGAGGTACTTGCGCCATGTTCCGCGTAGATTCAAGAGCGGCTTCAGAGAGGGT
ACTCAAGCTGCACCCAGGAATAAAGGAGCTGCAGCATCAGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGACTCTAGGAACTGAACGGAGGTGGAAGGACTCGACCTCGGGCATGGGCCTTGCTCGAGGCCAAGCTATGGGGTTGGGCGAGCCTTTCGGAAAGGGTACGGGCAGTTT
TGGTAAGAGGAGGAACAAGACCCATACTCTCTGCGTGCGGTGCGGCCGCCGCAGCTTCCATCTCCAGAAGAGCCGCTGTGCAGCATGTGCTTTCCCTGCTGCTCGCCTGC
GCAAATATAACTGGAGCGTGAAGGCAATTAGGAGAAAGACAACCGGAACTGGAAGGATGAGGTACTTGCGCCATGTTCCGCGTAGATTCAAGAGCGGCTTCAGAGAGGGT
ACTCAAGCTGCACCCAGGAATAAAGGAGCTGCAGCATCAGCATAA
Protein sequenceShow/hide protein sequence
MTLGTERRWKDSTSGMGLARGQAMGLGEPFGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREG
TQAAPRNKGAAASA