; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg013711 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg013711
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionBRCA1-associated protein
Genome locationscaffold3:47212621..47212980
RNA-Seq ExpressionSpg013711
SyntenySpg013711
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575616.1 BRAP2 RING ZnF UBP domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia]4.4e-2985.71Show/hide
Query:  MPTSSTAVHDVPVTSDEWFRPPKSSLVSADPSDF-SSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDDVSSSSSTSTSALPVSSDSL
        MPTSS A HDVP TSDE FRPPKSSLV  DPSDF SSSSSSSISGVTQAFHFSSGNPRIEEI+GVVHLFRDDVSSSSSTS SALPV    L
Subjt:  MPTSSTAVHDVPVTSDEWFRPPKSSLVSADPSDF-SSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDDVSSSSSTSTSALPVSSDSL
KAG7014159.1 BRCA1-associated protein [Cucurbita argyrosperma subsp. argyrosperma]4.4e-2985.71Show/hide
Query:  MPTSSTAVHDVPVTSDEWFRPPKSSLVSADPSDF-SSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDDVSSSSSTSTSALPVSSDSL
        MPTSS A HDVP TSDE FRPPKSSLV  DPSDF SSSSSSSISGVTQAFHFSSGNPRIEEI+GVVHLFRDDVSSSSSTS SALPV    L
Subjt:  MPTSSTAVHDVPVTSDEWFRPPKSSLVSADPSDF-SSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDDVSSSSSTSTSALPVSSDSL
XP_022954178.1 BRCA1-associated protein [Cucurbita moschata]5.7e-2984.78Show/hide
Query:  MPTSSTAVHDVPVTSDEWFRPPKSSLVSADPSDF--SSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDDVSSSSSTSTSALPVSSDSL
        MPTSS A HDVP TSDE FRPPKSSLV  DPSDF  SSSSSSSISGVTQAFHFSSGNPRIEEI+GVVHLFRDDVSSSSSTS SALPV    L
Subjt:  MPTSSTAVHDVPVTSDEWFRPPKSSLVSADPSDF--SSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDDVSSSSSTSTSALPVSSDSL
XP_022991696.1 BRCA1-associated protein [Cucurbita maxima]1.2e-2986.81Show/hide
Query:  MPTSSTAVHDVPVTSDEWFRPPKSSLVSADPSDF-SSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDDVSSSSSTSTSALPVSSDSL
        MPTSSTA HDVP TSDE FRPPKSSLV  DPSDF SSSSSSSISGVTQAFHFSSGNPRIEEI+GVVHLFRDDVSSSSSTS SALPV    L
Subjt:  MPTSSTAVHDVPVTSDEWFRPPKSSLVSADPSDF-SSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDDVSSSSSTSTSALPVSSDSL
XP_038897033.1 BRAP2 RING ZnF UBP domain-containing protein 2 [Benincasa hispida]3.4e-2982.22Show/hide
Query:  MPTSSTAVHDVPVTSDEWFRPPKSSLVSADPSDFSSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDDVSSSSSTSTSALPVSSDSL
        MPTSST  HDVP T DE FRPPKSSLVS DP+DFSS+SSSSISG+TQAFHFSSGNPRIEEI+GVV+LFRDDVSSSSSTS+SALPV    L
Subjt:  MPTSSTAVHDVPVTSDEWFRPPKSSLVSADPSDFSSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDDVSSSSSTSTSALPVSSDSL
TrEMBL top hitse value%identityAlignment
A0A1S3CE39 BRCA1-associated protein2.4e-2577.78Show/hide
Query:  MPTSSTAVHDVPVTSDEWFRPPKSSLVSADPSDFSSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDDVSSSSSTSTSALPVSSDSL
        MPT+ST   DVP TSDE FR PKSSL S DPS  SS+SSSSISG TQAFHFSSGNPRIEEI+GVVHLFRDD SSSSSTS+SALPV    L
Subjt:  MPTSSTAVHDVPVTSDEWFRPPKSSLVSADPSDFSSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDDVSSSSSTSTSALPVSSDSL
A0A5A7UX21 BRCA1-associated protein2.4e-2577.78Show/hide
Query:  MPTSSTAVHDVPVTSDEWFRPPKSSLVSADPSDFSSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDDVSSSSSTSTSALPVSSDSL
        MPT+ST   DVP TSDE FR PKSSL S DPS  SS+SSSSISG TQAFHFSSGNPRIEEI+GVVHLFRDD SSSSSTS+SALPV    L
Subjt:  MPTSSTAVHDVPVTSDEWFRPPKSSLVSADPSDFSSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDDVSSSSSTSTSALPVSSDSL
A0A6J1CQL5 BRCA1-associated protein7.1e-2577.78Show/hide
Query:  MPTSSTAVHDVPVTSDEWFRPPKSSLVSADPSDFSSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDDVSSSSSTSTSALPVSSDSL
        M TSST+  DVP +SDE FRPPKS++VS DPSDFSSSSSSSISGVTQAFHFSSGNPRIEEI+GVVHLFRD+V SSSSTS S+L V    L
Subjt:  MPTSSTAVHDVPVTSDEWFRPPKSSLVSADPSDFSSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDDVSSSSSTSTSALPVSSDSL
A0A6J1GQD0 BRCA1-associated protein2.8e-2984.78Show/hide
Query:  MPTSSTAVHDVPVTSDEWFRPPKSSLVSADPSDF--SSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDDVSSSSSTSTSALPVSSDSL
        MPTSS A HDVP TSDE FRPPKSSLV  DPSDF  SSSSSSSISGVTQAFHFSSGNPRIEEI+GVVHLFRDDVSSSSSTS SALPV    L
Subjt:  MPTSSTAVHDVPVTSDEWFRPPKSSLVSADPSDF--SSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDDVSSSSSTSTSALPVSSDSL
A0A6J1JRH2 BRCA1-associated protein5.6e-3086.81Show/hide
Query:  MPTSSTAVHDVPVTSDEWFRPPKSSLVSADPSDF-SSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDDVSSSSSTSTSALPVSSDSL
        MPTSSTA HDVP TSDE FRPPKSSLV  DPSDF SSSSSSSISGVTQAFHFSSGNPRIEEI+GVVHLFRDDVSSSSSTS SALPV    L
Subjt:  MPTSSTAVHDVPVTSDEWFRPPKSSLVSADPSDF-SSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDDVSSSSSTSTSALPVSSDSL
SwissProt top hitse value%identityAlignment
O80996 BRAP2 RING ZnF UBP domain-containing protein 28.4e-0756.14Show/hide
Query:  SSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDD-VSSSSSTSTSALPVSSDSL
        S S  SS+S + Q  HFSSGNPRI E +GV+HL  D+ VSSSSS+S+S LP+  + L
Subjt:  SSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDD-VSSSSSTSTSALPVSSDSL
Arabidopsis top hitse value%identityAlignment
AT2G26000.1 zinc finger (C3HC4-type RING finger) family protein6.0e-0856.14Show/hide
Query:  SSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDD-VSSSSSTSTSALPVSSDSL
        S S  SS+S + Q  HFSSGNPRI E +GV+HL  D+ VSSSSS+S+S LP+  + L
Subjt:  SSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDD-VSSSSSTSTSALPVSSDSL
AT2G26000.2 zinc finger (C3HC4-type RING finger) family protein6.0e-0856.14Show/hide
Query:  SSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDD-VSSSSSTSTSALPVSSDSL
        S S  SS+S + Q  HFSSGNPRI E +GV+HL  D+ VSSSSS+S+S LP+  + L
Subjt:  SSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDD-VSSSSSTSTSALPVSSDSL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGACTAGCTCGACTGCAGTTCACGACGTACCTGTGACCTCCGATGAATGGTTCCGGCCTCCAAAATCGTCGTTGGTTTCAGCCGATCCTAGCGATTTTTCTTCATC
TTCCTCCTCTTCCATCTCTGGTGTGACGCAGGCCTTTCATTTCTCCTCTGGAAACCCCAGAATCGAGGAGATCAAAGGGGTTGTACATCTATTCCGAGATGACGTTTCCT
CATCATCCTCGACCTCAACTTCTGCTCTCCCCGTGAGCTCCGATTCTTTAAATATTTATTTATTTCTTCTCGTTGTTGTGGAATTTCAATTTGTTGGTCTTCAAGGCGAT
TTGTCTCGTTTCATAATTACTATGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCGACTAGCTCGACTGCAGTTCACGACGTACCTGTGACCTCCGATGAATGGTTCCGGCCTCCAAAATCGTCGTTGGTTTCAGCCGATCCTAGCGATTTTTCTTCATC
TTCCTCCTCTTCCATCTCTGGTGTGACGCAGGCCTTTCATTTCTCCTCTGGAAACCCCAGAATCGAGGAGATCAAAGGGGTTGTACATCTATTCCGAGATGACGTTTCCT
CATCATCCTCGACCTCAACTTCTGCTCTCCCCGTGAGCTCCGATTCTTTAAATATTTATTTATTTCTTCTCGTTGTTGTGGAATTTCAATTTGTTGGTCTTCAAGGCGAT
TTGTCTCGTTTCATAATTACTATGGTTTAG
Protein sequenceShow/hide protein sequence
MPTSSTAVHDVPVTSDEWFRPPKSSLVSADPSDFSSSSSSSISGVTQAFHFSSGNPRIEEIKGVVHLFRDDVSSSSSTSTSALPVSSDSLNIYLFLLVVVEFQFVGLQGD
LSRFIITMV