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Spg013715 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg013715
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein OSB2, chloroplastic-like
Genome locationscaffold3:42631161..42631859
RNA-Seq ExpressionSpg013715
SyntenySpg013715
Gene Ontology termsGO:0006264 - mitochondrial DNA replication (biological process)
GO:0051096 - positive regulation of helicase activity (biological process)
GO:0042645 - mitochondrial nucleoid (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
InterPro domainsIPR011344 - Single-stranded DNA-binding protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059696.1 protein OSB2 [Cucumis melo var. makuwa]1.9e-4582.26Show/hide
Query:  MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIAS--PFLSHQNAPNKQLRFATRFPKCSAMENYSNYS-ITYPKPSEIPWKKELSNSVSLIGTVGMPVELK
        M +ALEQTLTLSSS  SKNSIFSIP N+L+I+S  PF S+ N P K LRFATRFPKCSAMENY+NYS +TYPKPSEIPWKKELSNSV+LIGTVG+PVELK
Subjt:  MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIAS--PFLSHQNAPNKQLRFATRFPKCSAMENYSNYS-ITYPKPSEIPWKKELSNSVSLIGTVGMPVELK

Query:  HLASGKDVAWTRLAVWKSSTETSW
        HL SGKDVAWTRLAVWKSSTETSW
Subjt:  HLASGKDVAWTRLAVWKSSTETSW

KAG7014475.1 Protein OSB1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-4380.49Show/hide
Query:  MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIA--SPFLSHQNAPNKQLRFATRFPKCSAMENYSNYSITYPKPSEIPWKKELSNSVSLIGTVGMPVELKH
        MIMA+E+ LTLSSS LSK+ IFS   NK +IA  SPFLSH NA  K  RFATRFPKC AMENYS YS++YPKPSEIPWKKELSNSVSLIGTVG PVELKH
Subjt:  MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIA--SPFLSHQNAPNKQLRFATRFPKCSAMENYSNYSITYPKPSEIPWKKELSNSVSLIGTVGMPVELKH

Query:  LASGKDVAWTRLAVWKSSTETSW
        L SGKDVAWTRLAVWKSSTETSW
Subjt:  LASGKDVAWTRLAVWKSSTETSW

XP_008451268.1 PREDICTED: protein OSB2, chloroplastic-like [Cucumis melo]1.9e-4582.26Show/hide
Query:  MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIAS--PFLSHQNAPNKQLRFATRFPKCSAMENYSNYS-ITYPKPSEIPWKKELSNSVSLIGTVGMPVELK
        M +ALEQTLTLSSS  SKNSIFSIP N+L+I+S  PF S+ N P K LRFATRFPKCSAMENY+NYS +TYPKPSEIPWKKELSNSV+LIGTVG+PVELK
Subjt:  MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIAS--PFLSHQNAPNKQLRFATRFPKCSAMENYSNYS-ITYPKPSEIPWKKELSNSVSLIGTVGMPVELK

Query:  HLASGKDVAWTRLAVWKSSTETSW
        HL SGKDVAWTRLAVWKSSTETSW
Subjt:  HLASGKDVAWTRLAVWKSSTETSW

XP_023549001.1 protein OSB2, chloroplastic-like [Cucurbita pepo subsp. pepo]4.6e-4481.3Show/hide
Query:  MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIA--SPFLSHQNAPNKQLRFATRFPKCSAMENYSNYSITYPKPSEIPWKKELSNSVSLIGTVGMPVELKH
        MIMA+E+TL LSSS LSKN IFS   NKL+IA  SP LSH NA  K  RFATRFPKC AMENYS YS++YPKPSEIPWKKELSNSVSLIGTVG PVELKH
Subjt:  MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIA--SPFLSHQNAPNKQLRFATRFPKCSAMENYSNYSITYPKPSEIPWKKELSNSVSLIGTVGMPVELKH

Query:  LASGKDVAWTRLAVWKSSTETSW
        L SGKDVAWTRLAVWKSSTETSW
Subjt:  LASGKDVAWTRLAVWKSSTETSW

XP_038896738.1 protein OSB2, chloroplastic-like [Benincasa hispida]1.6e-4988.62Show/hide
Query:  MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIAS--PFLSHQNAPNKQLRFATRFPKCSAMENYSNYSITYPKPSEIPWKKELSNSVSLIGTVGMPVELKH
        MIMALEQTLTLSSSLLSKNSIFSIP N+L+I+S  PFLS  NAP K LRFATRFPKCSAMENYS+YS TYPKPSEIPWKK+LSNSVSLIGTVGMPVELKH
Subjt:  MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIAS--PFLSHQNAPNKQLRFATRFPKCSAMENYSNYSITYPKPSEIPWKKELSNSVSLIGTVGMPVELKH

Query:  LASGKDVAWTRLAVWKSSTETSW
        LA+GKDVAWTRLAVWKSSTETSW
Subjt:  LASGKDVAWTRLAVWKSSTETSW

TrEMBL top hitse value%identityAlignment
A0A0A0K4W2 Uncharacterized protein8.4e-4479.84Show/hide
Query:  MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIAS--PFLSHQNAPNKQLRFATRFPKCSAMENYSNYS-ITYPKPSEIPWKKELSNSVSLIGTVGMPVELK
        M+MALEQTL LSSSL SKNSIFSIP N+L I+S  PF S+ N P K LRF   FPKCSAMENY+NYS +TYPKPS+IPWKKELSNSV+LIGTVG+PVELK
Subjt:  MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIAS--PFLSHQNAPNKQLRFATRFPKCSAMENYSNYS-ITYPKPSEIPWKKELSNSVSLIGTVGMPVELK

Query:  HLASGKDVAWTRLAVWKSSTETSW
        HL SGKDVAWTRLAVWKSSTETSW
Subjt:  HLASGKDVAWTRLAVWKSSTETSW

A0A1S3BRV3 protein OSB2, chloroplastic-like9.0e-4682.26Show/hide
Query:  MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIAS--PFLSHQNAPNKQLRFATRFPKCSAMENYSNYS-ITYPKPSEIPWKKELSNSVSLIGTVGMPVELK
        M +ALEQTLTLSSS  SKNSIFSIP N+L+I+S  PF S+ N P K LRFATRFPKCSAMENY+NYS +TYPKPSEIPWKKELSNSV+LIGTVG+PVELK
Subjt:  MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIAS--PFLSHQNAPNKQLRFATRFPKCSAMENYSNYS-ITYPKPSEIPWKKELSNSVSLIGTVGMPVELK

Query:  HLASGKDVAWTRLAVWKSSTETSW
        HL SGKDVAWTRLAVWKSSTETSW
Subjt:  HLASGKDVAWTRLAVWKSSTETSW

A0A5D3DR47 Protein OSB29.0e-4682.26Show/hide
Query:  MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIAS--PFLSHQNAPNKQLRFATRFPKCSAMENYSNYS-ITYPKPSEIPWKKELSNSVSLIGTVGMPVELK
        M +ALEQTLTLSSS  SKNSIFSIP N+L+I+S  PF S+ N P K LRFATRFPKCSAMENY+NYS +TYPKPSEIPWKKELSNSV+LIGTVG+PVELK
Subjt:  MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIAS--PFLSHQNAPNKQLRFATRFPKCSAMENYSNYS-ITYPKPSEIPWKKELSNSVSLIGTVGMPVELK

Query:  HLASGKDVAWTRLAVWKSSTETSW
        HL SGKDVAWTRLAVWKSSTETSW
Subjt:  HLASGKDVAWTRLAVWKSSTETSW

A0A6J1DNW7 protein OSB2, chloroplastic-like isoform X27.9e-4277.69Show/hide
Query:  MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIASPFLSHQNAPNKQLRFATRFPKCSAMENYSNYSITYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLA
        M+MALEQTL+LSSSLL K+++ SIP N+ +IAS  LSH +A  K+LRFA RFPKCSAMEN+SNYS +Y KP EIPW KELSNSVSLIGTVG PVE+KHLA
Subjt:  MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIASPFLSHQNAPNKQLRFATRFPKCSAMENYSNYSITYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLA

Query:  SGKDVAWTRLAVWKSSTETSW
        SGKDVAWTRLAVWKSSTETSW
Subjt:  SGKDVAWTRLAVWKSSTETSW

A0A6J1DQC6 protein OSB2, chloroplastic-like isoform X17.9e-4277.69Show/hide
Query:  MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIASPFLSHQNAPNKQLRFATRFPKCSAMENYSNYSITYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLA
        M+MALEQTL+LSSSLL K+++ SIP N+ +IAS  LSH +A  K+LRFA RFPKCSAMEN+SNYS +Y KP EIPW KELSNSVSLIGTVG PVE+KHLA
Subjt:  MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIASPFLSHQNAPNKQLRFATRFPKCSAMENYSNYSITYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLA

Query:  SGKDVAWTRLAVWKSSTETSW
        SGKDVAWTRLAVWKSSTETSW
Subjt:  SGKDVAWTRLAVWKSSTETSW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAATGGCGCTAGAGCAAACCCTAACTCTTTCGTCATCGTTGTTATCAAAAAACTCCATCTTCTCCATCCCTACAAACAAATTACAAATCGCTTCCCCATTTCTCTC
CCATCAAAACGCTCCTAATAAACAGCTCCGATTCGCAACTCGTTTCCCAAAATGCTCGGCTATGGAAAACTACAGCAATTACTCTATAACCTACCCTAAACCTTCCGAAA
TTCCATGGAAGAAGGAGCTCAGTAACTCCGTGAGTCTCATCGGAACCGTTGGTATGCCTGTGGAGCTCAAGCACCTAGCATCCGGCAAGGATGTGGCTTGGACGCGACTC
GCCGTGTGGAAGTCCTCTACTGAAACATCTTGGACCATGGTTCGTATAGACCTCATTTCTGTTTGCATAGGCTTGGGATTCCGAAATTGGTGTCCCAATTTCAGTAGGAT
GTAG
mRNA sequenceShow/hide mRNA sequence
ATGATAATGGCGCTAGAGCAAACCCTAACTCTTTCGTCATCGTTGTTATCAAAAAACTCCATCTTCTCCATCCCTACAAACAAATTACAAATCGCTTCCCCATTTCTCTC
CCATCAAAACGCTCCTAATAAACAGCTCCGATTCGCAACTCGTTTCCCAAAATGCTCGGCTATGGAAAACTACAGCAATTACTCTATAACCTACCCTAAACCTTCCGAAA
TTCCATGGAAGAAGGAGCTCAGTAACTCCGTGAGTCTCATCGGAACCGTTGGTATGCCTGTGGAGCTCAAGCACCTAGCATCCGGCAAGGATGTGGCTTGGACGCGACTC
GCCGTGTGGAAGTCCTCTACTGAAACATCTTGGACCATGGTTCGTATAGACCTCATTTCTGTTTGCATAGGCTTGGGATTCCGAAATTGGTGTCCCAATTTCAGTAGGAT
GTAG
Protein sequenceShow/hide protein sequence
MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIASPFLSHQNAPNKQLRFATRFPKCSAMENYSNYSITYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRL
AVWKSSTETSWTMVRIDLISVCIGLGFRNWCPNFSRM