CuGenDBv2

Gene ID	Spg013719
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	MMS19 nucleotide excision repair protein
Genome location	scaffold3:48468348..48478870
RNA-Seq Expression	Spg013719
Synteny	Spg013719
Gene Ontology terms	GO:0006281 - DNA repair (biological process) GO:0016226 - iron-sulfur cluster assembly (biological process) GO:0097428 - protein maturation by iron-sulfur cluster transfer (biological process) GO:0005634 - nucleus (cellular component) GO:0097361 - CIA complex (cellular component)
InterPro domains	IPR024687 - MMS19, C-terminal IPR029240 - MMS19, N-terminal IPR039920 - DNA repair/transcription protein MET18/MMS19

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022154519.1 MMS19 nucleotide excision repair protein homolog isoform X1 [Momordica charantia]

0.0e+00

73.61

Show/hide

Query:  GKEEDVDVKRNDLSQALMVWCAVFLSKWVLVDFGATGIELQQTSYFCGYRKLISCLCLMAFSSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVK
        G+EEDVDV+R+DLSQALM                                        MAFSSTP FEP+AIPLLLEKLSSSLPQAKIDSLKYLSDCTVK
Subjt:  GKEEDVDVKRNDLSQALMVWCAVFLSKWVLVDFGATGIELQQTSYFCGYRKLISCLCLMAFSSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVK

Query:  YGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQKMVVESNGLFIRLIINDEDIKDIFNILNIYTFYNDFPLQSRQRL
        YGADRMEKH EAIWSSLKEIIFTSIGQPSLSIN ++LNS     +EIT EAL LLQK++VESNGLF+ LIINDEDIKDIFNILNIYT YN+FP QSRQRL
Subjt:  YGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQKMVVESNGLFIRLIINDEDIKDIFNILNIYTFYNDFPLQSRQRL

Query:  NAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKISPSGNKNFGALYLCIELLAACRDLISSSDEHTCSVKEKSYSMLQTFSCSMVQLLN
        NAVG ILYN ANASVASCNEVFESFFPRLLDIVGI  +Q ++N+ISPSGN NFGALYLCIELLAACR LI S DEHT SVKEKS+SMLQTFSCSMVQ+L 
Subjt:  NAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKISPSGNKNFGALYLCIELLAACRDLISSSDEHTCSVKEKSYSMLQTFSCSMVQLLN

Query:  STFPGIIKKDLHDAEFYCAVKGLQNLATFPVDSSPVSSVVFEDILSTLMSVITVDFKFVSLWNHASKALQHIGSFVDKYHGSVKLQSYMHVVIERIASMF
        STFPGII+KDLHDAEFYCAVKGLQNLATFPVDSSPVS +VF+DIL  LMS ITVDFKF SLW HA KALQHIGSFVDKY GSV+ QSYMHVV+E IASMF
Subjt:  STFPGIIKKDLHDAEFYCAVKGLQNLATFPVDSSPVSSVVFEDILSTLMSVITVDFKFVSLWNHASKALQHIGSFVDKYHGSVKLQSYMHVVIERIASMF

Query:  SLPDEAMPLMLKLELASDIGRTGRSYMLKIIQGIEEAIFFHLSEVYVR--VKKVNNLYFMLDISRLWQFKVSRDFIVPLGLLLDKNSSMVYGSITFLQRR
        SL DEAMPLMLKLELASDIGRTGRSYML I+QGI EAIFFHL EVYV    K V  L  +LD    +  K     I+P                      
Subjt:  SLPDEAMPLMLKLELASDIGRTGRSYMLKIIQGIEEAIFFHLSEVYVR--VKKVNNLYFMLDISRLWQFKVSRDFIVPLGLLLDKNSSMVYGSITFLQRR

Query:  ETTVGGAVRPDLGSGDGESTVRGGGARAGIRAARLDEAEDFEEVILRFALNIWDQIEKCLVFSASMLDKVLLDATMKALKLSVRSCSKESQNIIIQKAFD
                                          LDEA DFEEVI+R ALNIWDQIEKCLVFSASM +KV+LDATM ALKLSVRSCSKESQN IIQKA++
Subjt:  ETTVGGAVRPDLGSGDGESTVRGGGARAGIRAARLDEAEDFEEVILRFALNIWDQIEKCLVFSASMLDKVLLDATMKALKLSVRSCSKESQNIIIQKAFD

Query:  VLLTTSFSPLEVASSTTVPVQMEGLLLLQQDNSPLCRDEWILSLFASVIIALRPQTHVPDVRSVMHLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVS
        VLLT++FSP +VASST +PVQMEGL LLQQ +SP+CRDEWILSLFASVIIAL PQTHVP+VRSVMHLLM SIT+GCIPAAQALGSMINKLSLKSD+VEVS
Subjt:  VLLTTSFSPLEVASSTTVPVQMEGLLLLQQDNSPLCRDEWILSLFASVIIALRPQTHVPDVRSVMHLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVS

Query:  SYVSLEEAIDIIFKIKFRCFHNGSTRDGSEMFLTDLCSSIEKSSSLQVHAVVGLSWIGKGLLLCGHEKVRDVTMVLLECLLSKSRSDVSPLEQVILEKDC
        SYVSLEEAIDIIFK KFR  +  STRDGSEMFLTDLCSS   S   QVHAVVGLSWIGKGLLLCGHEKVRD+TMV LECLLSK R+D SPL+QV+LEKDC
Subjt:  SYVSLEEAIDIIFKIKFRCFHNGSTRDGSEMFLTDLCSSIEKSSSLQVHAVVGLSWIGKGLLLCGHEKVRDVTMVLLECLLSKSRSDVSPLEQVILEKDC

Query:  ETNLDFAVMKSAADAFHILMSDSEACLNRKFHAIVRPLYKQRFSSTMMPIFQSLVSKSDSSLSR
        ETNLDFAVMK AADAFHILM+DSE CLNRKFHAIVRPLYKQRFSSTMMPIFQSL+SKSDSSLSR
Subjt:  ETNLDFAVMKSAADAFHILMSDSEACLNRKFHAIVRPLYKQRFSSTMMPIFQSLVSKSDSSLSR

XP_022154528.1 MMS19 nucleotide excision repair protein homolog isoform X2 [Momordica charantia]

0.0e+00

73.61

Show/hide

Query:  GKEEDVDVKRNDLSQALMVWCAVFLSKWVLVDFGATGIELQQTSYFCGYRKLISCLCLMAFSSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVK
        G+EEDVDV+R+DLSQALM                                        MAFSSTP FEP+AIPLLLEKLSSSLPQAKIDSLKYLSDCTVK
Subjt:  GKEEDVDVKRNDLSQALMVWCAVFLSKWVLVDFGATGIELQQTSYFCGYRKLISCLCLMAFSSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVK

Query:  YGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQKMVVESNGLFIRLIINDEDIKDIFNILNIYTFYNDFPLQSRQRL
        YGADRMEKH EAIWSSLKEIIFTSIGQPSLSIN ++LNS     +EIT EAL LLQK++VESNGLF+ LIINDEDIKDIFNILNIYT YN+FP QSRQRL
Subjt:  YGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQKMVVESNGLFIRLIINDEDIKDIFNILNIYTFYNDFPLQSRQRL

Query:  NAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKISPSGNKNFGALYLCIELLAACRDLISSSDEHTCSVKEKSYSMLQTFSCSMVQLLN
        NAVG ILYN ANASVASCNEVFESFFPRLLDIVGI  +Q ++N+ISPSGN NFGALYLCIELLAACR LI S DEHT SVKEKS+SMLQTFSCSMVQ+L 
Subjt:  NAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKISPSGNKNFGALYLCIELLAACRDLISSSDEHTCSVKEKSYSMLQTFSCSMVQLLN

Query:  STFPGIIKKDLHDAEFYCAVKGLQNLATFPVDSSPVSSVVFEDILSTLMSVITVDFKFVSLWNHASKALQHIGSFVDKYHGSVKLQSYMHVVIERIASMF
        STFPGII+KDLHDAEFYCAVKGLQNLATFPVDSSPVS +VF+DIL  LMS ITVDFKF SLW HA KALQHIGSFVDKY GSV+ QSYMHVV+E IASMF
Subjt:  STFPGIIKKDLHDAEFYCAVKGLQNLATFPVDSSPVSSVVFEDILSTLMSVITVDFKFVSLWNHASKALQHIGSFVDKYHGSVKLQSYMHVVIERIASMF

Query:  SLPDEAMPLMLKLELASDIGRTGRSYMLKIIQGIEEAIFFHLSEVYVR--VKKVNNLYFMLDISRLWQFKVSRDFIVPLGLLLDKNSSMVYGSITFLQRR
        SL DEAMPLMLKLELASDIGRTGRSYML I+QGI EAIFFHL EVYV    K V  L  +LD    +  K     I+P                      
Subjt:  SLPDEAMPLMLKLELASDIGRTGRSYMLKIIQGIEEAIFFHLSEVYVR--VKKVNNLYFMLDISRLWQFKVSRDFIVPLGLLLDKNSSMVYGSITFLQRR

Query:  ETTVGGAVRPDLGSGDGESTVRGGGARAGIRAARLDEAEDFEEVILRFALNIWDQIEKCLVFSASMLDKVLLDATMKALKLSVRSCSKESQNIIIQKAFD
                                          LDEA DFEEVI+R ALNIWDQIEKCLVFSASM +KV+LDATM ALKLSVRSCSKESQN IIQKA++
Subjt:  ETTVGGAVRPDLGSGDGESTVRGGGARAGIRAARLDEAEDFEEVILRFALNIWDQIEKCLVFSASMLDKVLLDATMKALKLSVRSCSKESQNIIIQKAFD

Query:  VLLTTSFSPLEVASSTTVPVQMEGLLLLQQDNSPLCRDEWILSLFASVIIALRPQTHVPDVRSVMHLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVS
        VLLT++FSP +VASST +PVQMEGL LLQQ +SP+CRDEWILSLFASVIIAL PQTHVP+VRSVMHLLM SIT+GCIPAAQALGSMINKLSLKSD+VEVS
Subjt:  VLLTTSFSPLEVASSTTVPVQMEGLLLLQQDNSPLCRDEWILSLFASVIIALRPQTHVPDVRSVMHLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVS

Query:  SYVSLEEAIDIIFKIKFRCFHNGSTRDGSEMFLTDLCSSIEKSSSLQVHAVVGLSWIGKGLLLCGHEKVRDVTMVLLECLLSKSRSDVSPLEQVILEKDC
        SYVSLEEAIDIIFK KFR  +  STRDGSEMFLTDLCSS   S   QVHAVVGLSWIGKGLLLCGHEKVRD+TMV LECLLSK R+D SPL+QV+LEKDC
Subjt:  SYVSLEEAIDIIFKIKFRCFHNGSTRDGSEMFLTDLCSSIEKSSSLQVHAVVGLSWIGKGLLLCGHEKVRDVTMVLLECLLSKSRSDVSPLEQVILEKDC

Query:  ETNLDFAVMKSAADAFHILMSDSEACLNRKFHAIVRPLYKQRFSSTMMPIFQSLVSKSDSSLSR
        ETNLDFAVMK AADAFHILM+DSE CLNRKFHAIVRPLYKQRFSSTMMPIFQSL+SKSDSSLSR
Subjt:  ETNLDFAVMKSAADAFHILMSDSEACLNRKFHAIVRPLYKQRFSSTMMPIFQSLVSKSDSSLSR

XP_022154542.1 MMS19 nucleotide excision repair protein homolog isoform X3 [Momordica charantia]

0.0e+00

73.61

Show/hide

Query:  GKEEDVDVKRNDLSQALMVWCAVFLSKWVLVDFGATGIELQQTSYFCGYRKLISCLCLMAFSSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVK
        G+EEDVDV+R+DLSQALM                                        MAFSSTP FEP+AIPLLLEKLSSSLPQAKIDSLKYLSDCTVK
Subjt:  GKEEDVDVKRNDLSQALMVWCAVFLSKWVLVDFGATGIELQQTSYFCGYRKLISCLCLMAFSSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVK

Query:  YGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQKMVVESNGLFIRLIINDEDIKDIFNILNIYTFYNDFPLQSRQRL
        YGADRMEKH EAIWSSLKEIIFTSIGQPSLSIN ++LNS     +EIT EAL LLQK++VESNGLF+ LIINDEDIKDIFNILNIYT YN+FP QSRQRL
Subjt:  YGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQKMVVESNGLFIRLIINDEDIKDIFNILNIYTFYNDFPLQSRQRL

Query:  NAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKISPSGNKNFGALYLCIELLAACRDLISSSDEHTCSVKEKSYSMLQTFSCSMVQLLN
        NAVG ILYN ANASVASCNEVFESFFPRLLDIVGI  +Q ++N+ISPSGN NFGALYLCIELLAACR LI S DEHT SVKEKS+SMLQTFSCSMVQ+L 
Subjt:  NAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKISPSGNKNFGALYLCIELLAACRDLISSSDEHTCSVKEKSYSMLQTFSCSMVQLLN

Query:  STFPGIIKKDLHDAEFYCAVKGLQNLATFPVDSSPVSSVVFEDILSTLMSVITVDFKFVSLWNHASKALQHIGSFVDKYHGSVKLQSYMHVVIERIASMF
        STFPGII+KDLHDAEFYCAVKGLQNLATFPVDSSPVS +VF+DIL  LMS ITVDFKF SLW HA KALQHIGSFVDKY GSV+ QSYMHVV+E IASMF
Subjt:  STFPGIIKKDLHDAEFYCAVKGLQNLATFPVDSSPVSSVVFEDILSTLMSVITVDFKFVSLWNHASKALQHIGSFVDKYHGSVKLQSYMHVVIERIASMF

Query:  SLPDEAMPLMLKLELASDIGRTGRSYMLKIIQGIEEAIFFHLSEVYVR--VKKVNNLYFMLDISRLWQFKVSRDFIVPLGLLLDKNSSMVYGSITFLQRR
        SL DEAMPLMLKLELASDIGRTGRSYML I+QGI EAIFFHL EVYV    K V  L  +LD    +  K     I+P                      
Subjt:  SLPDEAMPLMLKLELASDIGRTGRSYMLKIIQGIEEAIFFHLSEVYVR--VKKVNNLYFMLDISRLWQFKVSRDFIVPLGLLLDKNSSMVYGSITFLQRR

Query:  ETTVGGAVRPDLGSGDGESTVRGGGARAGIRAARLDEAEDFEEVILRFALNIWDQIEKCLVFSASMLDKVLLDATMKALKLSVRSCSKESQNIIIQKAFD
                                          LDEA DFEEVI+R ALNIWDQIEKCLVFSASM +KV+LDATM ALKLSVRSCSKESQN IIQKA++
Subjt:  ETTVGGAVRPDLGSGDGESTVRGGGARAGIRAARLDEAEDFEEVILRFALNIWDQIEKCLVFSASMLDKVLLDATMKALKLSVRSCSKESQNIIIQKAFD

Query:  VLLTTSFSPLEVASSTTVPVQMEGLLLLQQDNSPLCRDEWILSLFASVIIALRPQTHVPDVRSVMHLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVS
        VLLT++FSP +VASST +PVQMEGL LLQQ +SP+CRDEWILSLFASVIIAL PQTHVP+VRSVMHLLM SIT+GCIPAAQALGSMINKLSLKSD+VEVS
Subjt:  VLLTTSFSPLEVASSTTVPVQMEGLLLLQQDNSPLCRDEWILSLFASVIIALRPQTHVPDVRSVMHLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVS

Query:  SYVSLEEAIDIIFKIKFRCFHNGSTRDGSEMFLTDLCSSIEKSSSLQVHAVVGLSWIGKGLLLCGHEKVRDVTMVLLECLLSKSRSDVSPLEQVILEKDC
        SYVSLEEAIDIIFK KFR  +  STRDGSEMFLTDLCSS   S   QVHAVVGLSWIGKGLLLCGHEKVRD+TMV LECLLSK R+D SPL+QV+LEKDC
Subjt:  SYVSLEEAIDIIFKIKFRCFHNGSTRDGSEMFLTDLCSSIEKSSSLQVHAVVGLSWIGKGLLLCGHEKVRDVTMVLLECLLSKSRSDVSPLEQVILEKDC

Query:  ETNLDFAVMKSAADAFHILMSDSEACLNRKFHAIVRPLYKQRFSSTMMPIFQSLVSKSDSSLSR
        ETNLDFAVMK AADAFHILM+DSE CLNRKFHAIVRPLYKQRFSSTMMPIFQSL+SKSDSSLSR
Subjt:  ETNLDFAVMKSAADAFHILMSDSEACLNRKFHAIVRPLYKQRFSSTMMPIFQSLVSKSDSSLSR

XP_022154552.1 MMS19 nucleotide excision repair protein homolog isoform X4 [Momordica charantia]

0.0e+00

73.61

Show/hide

Query:  GKEEDVDVKRNDLSQALMVWCAVFLSKWVLVDFGATGIELQQTSYFCGYRKLISCLCLMAFSSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVK
        G+EEDVDV+R+DLSQALM                                        MAFSSTP FEP+AIPLLLEKLSSSLPQAKIDSLKYLSDCTVK
Subjt:  GKEEDVDVKRNDLSQALMVWCAVFLSKWVLVDFGATGIELQQTSYFCGYRKLISCLCLMAFSSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVK

Query:  YGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQKMVVESNGLFIRLIINDEDIKDIFNILNIYTFYNDFPLQSRQRL
        YGADRMEKH EAIWSSLKEIIFTSIGQPSLSIN ++LNS     +EIT EAL LLQK++VESNGLF+ LIINDEDIKDIFNILNIYT YN+FP QSRQRL
Subjt:  YGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQKMVVESNGLFIRLIINDEDIKDIFNILNIYTFYNDFPLQSRQRL

Query:  NAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKISPSGNKNFGALYLCIELLAACRDLISSSDEHTCSVKEKSYSMLQTFSCSMVQLLN
        NAVG ILYN ANASVASCNEVFESFFPRLLDIVGI  +Q ++N+ISPSGN NFGALYLCIELLAACR LI S DEHT SVKEKS+SMLQTFSCSMVQ+L 
Subjt:  NAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKISPSGNKNFGALYLCIELLAACRDLISSSDEHTCSVKEKSYSMLQTFSCSMVQLLN

Query:  STFPGIIKKDLHDAEFYCAVKGLQNLATFPVDSSPVSSVVFEDILSTLMSVITVDFKFVSLWNHASKALQHIGSFVDKYHGSVKLQSYMHVVIERIASMF
        STFPGII+KDLHDAEFYCAVKGLQNLATFPVDSSPVS +VF+DIL  LMS ITVDFKF SLW HA KALQHIGSFVDKY GSV+ QSYMHVV+E IASMF
Subjt:  STFPGIIKKDLHDAEFYCAVKGLQNLATFPVDSSPVSSVVFEDILSTLMSVITVDFKFVSLWNHASKALQHIGSFVDKYHGSVKLQSYMHVVIERIASMF

Query:  SLPDEAMPLMLKLELASDIGRTGRSYMLKIIQGIEEAIFFHLSEVYVR--VKKVNNLYFMLDISRLWQFKVSRDFIVPLGLLLDKNSSMVYGSITFLQRR
        SL DEAMPLMLKLELASDIGRTGRSYML I+QGI EAIFFHL EVYV    K V  L  +LD    +  K     I+P                      
Subjt:  SLPDEAMPLMLKLELASDIGRTGRSYMLKIIQGIEEAIFFHLSEVYVR--VKKVNNLYFMLDISRLWQFKVSRDFIVPLGLLLDKNSSMVYGSITFLQRR

Query:  ETTVGGAVRPDLGSGDGESTVRGGGARAGIRAARLDEAEDFEEVILRFALNIWDQIEKCLVFSASMLDKVLLDATMKALKLSVRSCSKESQNIIIQKAFD
                                          LDEA DFEEVI+R ALNIWDQIEKCLVFSASM +KV+LDATM ALKLSVRSCSKESQN IIQKA++
Subjt:  ETTVGGAVRPDLGSGDGESTVRGGGARAGIRAARLDEAEDFEEVILRFALNIWDQIEKCLVFSASMLDKVLLDATMKALKLSVRSCSKESQNIIIQKAFD

Query:  VLLTTSFSPLEVASSTTVPVQMEGLLLLQQDNSPLCRDEWILSLFASVIIALRPQTHVPDVRSVMHLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVS
        VLLT++FSP +VASST +PVQMEGL LLQQ +SP+CRDEWILSLFASVIIAL PQTHVP+VRSVMHLLM SIT+GCIPAAQALGSMINKLSLKSD+VEVS
Subjt:  VLLTTSFSPLEVASSTTVPVQMEGLLLLQQDNSPLCRDEWILSLFASVIIALRPQTHVPDVRSVMHLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVS

Query:  SYVSLEEAIDIIFKIKFRCFHNGSTRDGSEMFLTDLCSSIEKSSSLQVHAVVGLSWIGKGLLLCGHEKVRDVTMVLLECLLSKSRSDVSPLEQVILEKDC
        SYVSLEEAIDIIFK KFR  +  STRDGSEMFLTDLCSS   S   QVHAVVGLSWIGKGLLLCGHEKVRD+TMV LECLLSK R+D SPL+QV+LEKDC
Subjt:  SYVSLEEAIDIIFKIKFRCFHNGSTRDGSEMFLTDLCSSIEKSSSLQVHAVVGLSWIGKGLLLCGHEKVRDVTMVLLECLLSKSRSDVSPLEQVILEKDC

Query:  ETNLDFAVMKSAADAFHILMSDSEACLNRKFHAIVRPLYKQRFSSTMMPIFQSLVSKSDSSLSR
        ETNLDFAVMK AADAFHILM+DSE CLNRKFHAIVRPLYKQRFSSTMMPIFQSL+SKSDSSLSR
Subjt:  ETNLDFAVMKSAADAFHILMSDSEACLNRKFHAIVRPLYKQRFSSTMMPIFQSLVSKSDSSLSR

XP_022992063.1 MMS19 nucleotide excision repair protein homolog isoform X2 [Cucurbita maxima]

0.0e+00

73.32

Show/hide

Query:  GKEEDVDVKRNDLSQALMVWCAVFLSKWVLVDFGATGIELQQTSYFCGYRKLISCLCLMAFSSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVK
        GKEEDVDV RNDLSQALM                                        MAFSS P FEPFAIPLLLEKLSSSLP AKIDSLKYLSDCTVK
Subjt:  GKEEDVDVKRNDLSQALMVWCAVFLSKWVLVDFGATGIELQQTSYFCGYRKLISCLCLMAFSSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVK

Query:  YGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQKMVVESNGLFIRLIINDEDIKDIFNILNIYTFYNDFPLQSRQRL
        YGADRMEKH EA+WSS+KEIIFTSI QPSLS NLESL+S SFQGNE+  EALRLLQKMVV+SNG F+RLIINDEDIK+IFNILNIYT YND PLQSRQRL
Subjt:  YGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQKMVVESNGLFIRLIINDEDIKDIFNILNIYTFYNDFPLQSRQRL

Query:  NAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKISPSGNKNFGALYLCIELLAACRDLISSSDEHTCSVKEKSYSMLQTFSCSMVQLLN
        NAVGHILY SANASVASCN VFESFF RLLD VGI VDQS N KISPS N NFGALYLCIELLAACRDL +S DE TCSVKEKSY+MLQTFS S+VQLLN
Subjt:  NAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKISPSGNKNFGALYLCIELLAACRDLISSSDEHTCSVKEKSYSMLQTFSCSMVQLLN

Query:  STFPGIIKKDLHDAEFYCAVKGLQNLATFPVDSSPVSSVVFEDILSTLMSVITVDFKFVSLWNHASKALQHIGSFVDKYHGSVKLQSYMHVVIERIASMF
        STFPGI KK+LHDAEFYCAVKGL+NLATFPV SSPVSSVVFE+IL  LMS IT++ K  SLWNHA KALQHIGSFVD+YHGSV+ QSYMHVV+E+IA MF
Subjt:  STFPGIIKKDLHDAEFYCAVKGLQNLATFPVDSSPVSSVVFEDILSTLMSVITVDFKFVSLWNHASKALQHIGSFVDKYHGSVKLQSYMHVVIERIASMF

Query:  SLPDEAMPLMLKLELASDIGRTGRSYMLKIIQGIEEAIFFHLSEVYVRVKKVNNLYFMLDISRLWQFKVSRDFIVPLGLLLDKNSSMVYGSITFLQRRET
        SL DEA+PL LKL++ASDIGR+GRSYMLKI+QGIEEA  FHL+EVY                                   + NS  V   ++ L    T
Subjt:  SLPDEAMPLMLKLELASDIGRTGRSYMLKIIQGIEEAIFFHLSEVYVRVKKVNNLYFMLDISRLWQFKVSRDFIVPLGLLLDKNSSMVYGSITFLQRRET

Query:  TVGGAVRPDLGSGDGESTVRGGGARAGIRAARLDEAEDFEEVILRFALNIWDQIEKCLVFSASMLDKVLLDATMKALKLSVRSCSKESQNIIIQKAFDVL
         +                               DEA DFEEVILR   NIWDQIEKCLVFS SM DK LLDATM ALKLSVRSCSKESQNIIIQKAF+VL
Subjt:  TVGGAVRPDLGSGDGESTVRGGGARAGIRAARLDEAEDFEEVILRFALNIWDQIEKCLVFSASMLDKVLLDATMKALKLSVRSCSKESQNIIIQKAFDVL

Query:  LTTSFSPLEVASSTTVPVQMEGLLLLQQDNSPLCRDEWILSLFASVIIALRPQTHVPDVRSVMHLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVSSY
        LT+SFSP +VA STT+PVQMEGL LLQQ +SPL RDEWILSLFASVIIALRPQ HVPDVRSVM LLMLSITRGCIPAAQALGSMINKLSLK DKVEVS+Y
Subjt:  LTTSFSPLEVASSTTVPVQMEGLLLLQQDNSPLCRDEWILSLFASVIIALRPQTHVPDVRSVMHLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVSSY

Query:  VSLEEAIDIIFKIKFRCFHNGSTRDGSEMFLTDLCSSIEKSSSLQVHAVVGLSWIGKGLLLCGHEKVRDVTMVLLECLLSKSRSDVSPLEQVILEKDCET
        VSLEEAIDIIF  KFRCFHNGSTRDGSEM LTDLCSSIEK S L VH VVGLSWIGKGLLL GHEKVRDVTMV L+CL+SKSR+D SPL++VILEKDCET
Subjt:  VSLEEAIDIIFKIKFRCFHNGSTRDGSEMFLTDLCSSIEKSSSLQVHAVVGLSWIGKGLLLCGHEKVRDVTMVLLECLLSKSRSDVSPLEQVILEKDCET

Query:  NLDFAVMKSAADAFHILMSDSEACLNRKFHAIVRPLYKQRFSSTMMPIFQSLVSKSDSSLSR
        NLDFAVM  AADAFHILMSDSEACLNRKFHAI+RPLYKQRF STMMPIFQSLVSKSD SLSR
Subjt:  NLDFAVMKSAADAFHILMSDSEACLNRKFHAIVRPLYKQRFSSTMMPIFQSLVSKSDSSLSR

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DJV6 MMS19 nucleotide excision repair protein

0.0e+00

73.61

Show/hide

Query:  GKEEDVDVKRNDLSQALMVWCAVFLSKWVLVDFGATGIELQQTSYFCGYRKLISCLCLMAFSSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVK
        G+EEDVDV+R+DLSQALM                                        MAFSSTP FEP+AIPLLLEKLSSSLPQAKIDSLKYLSDCTVK
Subjt:  GKEEDVDVKRNDLSQALMVWCAVFLSKWVLVDFGATGIELQQTSYFCGYRKLISCLCLMAFSSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVK

Query:  YGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQKMVVESNGLFIRLIINDEDIKDIFNILNIYTFYNDFPLQSRQRL
        YGADRMEKH EAIWSSLKEIIFTSIGQPSLSIN ++LNS     +EIT EAL LLQK++VESNGLF+ LIINDEDIKDIFNILNIYT YN+FP QSRQRL
Subjt:  YGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQKMVVESNGLFIRLIINDEDIKDIFNILNIYTFYNDFPLQSRQRL

Query:  NAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKISPSGNKNFGALYLCIELLAACRDLISSSDEHTCSVKEKSYSMLQTFSCSMVQLLN
        NAVG ILYN ANASVASCNEVFESFFPRLLDIVGI  +Q ++N+ISPSGN NFGALYLCIELLAACR LI S DEHT SVKEKS+SMLQTFSCSMVQ+L 
Subjt:  NAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKISPSGNKNFGALYLCIELLAACRDLISSSDEHTCSVKEKSYSMLQTFSCSMVQLLN

Query:  STFPGIIKKDLHDAEFYCAVKGLQNLATFPVDSSPVSSVVFEDILSTLMSVITVDFKFVSLWNHASKALQHIGSFVDKYHGSVKLQSYMHVVIERIASMF
        STFPGII+KDLHDAEFYCAVKGLQNLATFPVDSSPVS +VF+DIL  LMS ITVDFKF SLW HA KALQHIGSFVDKY GSV+ QSYMHVV+E IASMF
Subjt:  STFPGIIKKDLHDAEFYCAVKGLQNLATFPVDSSPVSSVVFEDILSTLMSVITVDFKFVSLWNHASKALQHIGSFVDKYHGSVKLQSYMHVVIERIASMF

Query:  SLPDEAMPLMLKLELASDIGRTGRSYMLKIIQGIEEAIFFHLSEVYVR--VKKVNNLYFMLDISRLWQFKVSRDFIVPLGLLLDKNSSMVYGSITFLQRR
        SL DEAMPLMLKLELASDIGRTGRSYML I+QGI EAIFFHL EVYV    K V  L  +LD    +  K     I+P                      
Subjt:  SLPDEAMPLMLKLELASDIGRTGRSYMLKIIQGIEEAIFFHLSEVYVR--VKKVNNLYFMLDISRLWQFKVSRDFIVPLGLLLDKNSSMVYGSITFLQRR

Query:  ETTVGGAVRPDLGSGDGESTVRGGGARAGIRAARLDEAEDFEEVILRFALNIWDQIEKCLVFSASMLDKVLLDATMKALKLSVRSCSKESQNIIIQKAFD
                                          LDEA DFEEVI+R ALNIWDQIEKCLVFSASM +KV+LDATM ALKLSVRSCSKESQN IIQKA++
Subjt:  ETTVGGAVRPDLGSGDGESTVRGGGARAGIRAARLDEAEDFEEVILRFALNIWDQIEKCLVFSASMLDKVLLDATMKALKLSVRSCSKESQNIIIQKAFD

Query:  VLLTTSFSPLEVASSTTVPVQMEGLLLLQQDNSPLCRDEWILSLFASVIIALRPQTHVPDVRSVMHLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVS
        VLLT++FSP +VASST +PVQMEGL LLQQ +SP+CRDEWILSLFASVIIAL PQTHVP+VRSVMHLLM SIT+GCIPAAQALGSMINKLSLKSD+VEVS
Subjt:  VLLTTSFSPLEVASSTTVPVQMEGLLLLQQDNSPLCRDEWILSLFASVIIALRPQTHVPDVRSVMHLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVS

Query:  SYVSLEEAIDIIFKIKFRCFHNGSTRDGSEMFLTDLCSSIEKSSSLQVHAVVGLSWIGKGLLLCGHEKVRDVTMVLLECLLSKSRSDVSPLEQVILEKDC
        SYVSLEEAIDIIFK KFR  +  STRDGSEMFLTDLCSS   S   QVHAVVGLSWIGKGLLLCGHEKVRD+TMV LECLLSK R+D SPL+QV+LEKDC
Subjt:  SYVSLEEAIDIIFKIKFRCFHNGSTRDGSEMFLTDLCSSIEKSSSLQVHAVVGLSWIGKGLLLCGHEKVRDVTMVLLECLLSKSRSDVSPLEQVILEKDC

Query:  ETNLDFAVMKSAADAFHILMSDSEACLNRKFHAIVRPLYKQRFSSTMMPIFQSLVSKSDSSLSR
        ETNLDFAVMK AADAFHILM+DSE CLNRKFHAIVRPLYKQRFSSTMMPIFQSL+SKSDSSLSR
Subjt:  ETNLDFAVMKSAADAFHILMSDSEACLNRKFHAIVRPLYKQRFSSTMMPIFQSLVSKSDSSLSR

A0A6J1DLY4 MMS19 nucleotide excision repair protein

0.0e+00

73.61

Show/hide

Query:  GKEEDVDVKRNDLSQALMVWCAVFLSKWVLVDFGATGIELQQTSYFCGYRKLISCLCLMAFSSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVK
        G+EEDVDV+R+DLSQALM                                        MAFSSTP FEP+AIPLLLEKLSSSLPQAKIDSLKYLSDCTVK
Subjt:  GKEEDVDVKRNDLSQALMVWCAVFLSKWVLVDFGATGIELQQTSYFCGYRKLISCLCLMAFSSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVK

Query:  YGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQKMVVESNGLFIRLIINDEDIKDIFNILNIYTFYNDFPLQSRQRL
        YGADRMEKH EAIWSSLKEIIFTSIGQPSLSIN ++LNS     +EIT EAL LLQK++VESNGLF+ LIINDEDIKDIFNILNIYT YN+FP QSRQRL
Subjt:  YGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQKMVVESNGLFIRLIINDEDIKDIFNILNIYTFYNDFPLQSRQRL

Query:  NAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKISPSGNKNFGALYLCIELLAACRDLISSSDEHTCSVKEKSYSMLQTFSCSMVQLLN
        NAVG ILYN ANASVASCNEVFESFFPRLLDIVGI  +Q ++N+ISPSGN NFGALYLCIELLAACR LI S DEHT SVKEKS+SMLQTFSCSMVQ+L 
Subjt:  NAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKISPSGNKNFGALYLCIELLAACRDLISSSDEHTCSVKEKSYSMLQTFSCSMVQLLN

Query:  STFPGIIKKDLHDAEFYCAVKGLQNLATFPVDSSPVSSVVFEDILSTLMSVITVDFKFVSLWNHASKALQHIGSFVDKYHGSVKLQSYMHVVIERIASMF
        STFPGII+KDLHDAEFYCAVKGLQNLATFPVDSSPVS +VF+DIL  LMS ITVDFKF SLW HA KALQHIGSFVDKY GSV+ QSYMHVV+E IASMF
Subjt:  STFPGIIKKDLHDAEFYCAVKGLQNLATFPVDSSPVSSVVFEDILSTLMSVITVDFKFVSLWNHASKALQHIGSFVDKYHGSVKLQSYMHVVIERIASMF

Query:  SLPDEAMPLMLKLELASDIGRTGRSYMLKIIQGIEEAIFFHLSEVYVR--VKKVNNLYFMLDISRLWQFKVSRDFIVPLGLLLDKNSSMVYGSITFLQRR
        SL DEAMPLMLKLELASDIGRTGRSYML I+QGI EAIFFHL EVYV    K V  L  +LD    +  K     I+P                      
Subjt:  SLPDEAMPLMLKLELASDIGRTGRSYMLKIIQGIEEAIFFHLSEVYVR--VKKVNNLYFMLDISRLWQFKVSRDFIVPLGLLLDKNSSMVYGSITFLQRR

Query:  ETTVGGAVRPDLGSGDGESTVRGGGARAGIRAARLDEAEDFEEVILRFALNIWDQIEKCLVFSASMLDKVLLDATMKALKLSVRSCSKESQNIIIQKAFD
                                          LDEA DFEEVI+R ALNIWDQIEKCLVFSASM +KV+LDATM ALKLSVRSCSKESQN IIQKA++
Subjt:  ETTVGGAVRPDLGSGDGESTVRGGGARAGIRAARLDEAEDFEEVILRFALNIWDQIEKCLVFSASMLDKVLLDATMKALKLSVRSCSKESQNIIIQKAFD

Query:  VLLTTSFSPLEVASSTTVPVQMEGLLLLQQDNSPLCRDEWILSLFASVIIALRPQTHVPDVRSVMHLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVS
        VLLT++FSP +VASST +PVQMEGL LLQQ +SP+CRDEWILSLFASVIIAL PQTHVP+VRSVMHLLM SIT+GCIPAAQALGSMINKLSLKSD+VEVS
Subjt:  VLLTTSFSPLEVASSTTVPVQMEGLLLLQQDNSPLCRDEWILSLFASVIIALRPQTHVPDVRSVMHLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVS

Query:  SYVSLEEAIDIIFKIKFRCFHNGSTRDGSEMFLTDLCSSIEKSSSLQVHAVVGLSWIGKGLLLCGHEKVRDVTMVLLECLLSKSRSDVSPLEQVILEKDC
        SYVSLEEAIDIIFK KFR  +  STRDGSEMFLTDLCSS   S   QVHAVVGLSWIGKGLLLCGHEKVRD+TMV LECLLSK R+D SPL+QV+LEKDC
Subjt:  SYVSLEEAIDIIFKIKFRCFHNGSTRDGSEMFLTDLCSSIEKSSSLQVHAVVGLSWIGKGLLLCGHEKVRDVTMVLLECLLSKSRSDVSPLEQVILEKDC

Query:  ETNLDFAVMKSAADAFHILMSDSEACLNRKFHAIVRPLYKQRFSSTMMPIFQSLVSKSDSSLSR
        ETNLDFAVMK AADAFHILM+DSE CLNRKFHAIVRPLYKQRFSSTMMPIFQSL+SKSDSSLSR
Subjt:  ETNLDFAVMKSAADAFHILMSDSEACLNRKFHAIVRPLYKQRFSSTMMPIFQSLVSKSDSSLSR

A0A6J1DLZ3 MMS19 nucleotide excision repair protein

0.0e+00

73.61

Show/hide

Query:  GKEEDVDVKRNDLSQALMVWCAVFLSKWVLVDFGATGIELQQTSYFCGYRKLISCLCLMAFSSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVK
        G+EEDVDV+R+DLSQALM                                        MAFSSTP FEP+AIPLLLEKLSSSLPQAKIDSLKYLSDCTVK
Subjt:  GKEEDVDVKRNDLSQALMVWCAVFLSKWVLVDFGATGIELQQTSYFCGYRKLISCLCLMAFSSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVK

Query:  YGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQKMVVESNGLFIRLIINDEDIKDIFNILNIYTFYNDFPLQSRQRL
        YGADRMEKH EAIWSSLKEIIFTSIGQPSLSIN ++LNS     +EIT EAL LLQK++VESNGLF+ LIINDEDIKDIFNILNIYT YN+FP QSRQRL
Subjt:  YGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQKMVVESNGLFIRLIINDEDIKDIFNILNIYTFYNDFPLQSRQRL

Query:  NAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKISPSGNKNFGALYLCIELLAACRDLISSSDEHTCSVKEKSYSMLQTFSCSMVQLLN
        NAVG ILYN ANASVASCNEVFESFFPRLLDIVGI  +Q ++N+ISPSGN NFGALYLCIELLAACR LI S DEHT SVKEKS+SMLQTFSCSMVQ+L 
Subjt:  NAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKISPSGNKNFGALYLCIELLAACRDLISSSDEHTCSVKEKSYSMLQTFSCSMVQLLN

Query:  STFPGIIKKDLHDAEFYCAVKGLQNLATFPVDSSPVSSVVFEDILSTLMSVITVDFKFVSLWNHASKALQHIGSFVDKYHGSVKLQSYMHVVIERIASMF
        STFPGII+KDLHDAEFYCAVKGLQNLATFPVDSSPVS +VF+DIL  LMS ITVDFKF SLW HA KALQHIGSFVDKY GSV+ QSYMHVV+E IASMF
Subjt:  STFPGIIKKDLHDAEFYCAVKGLQNLATFPVDSSPVSSVVFEDILSTLMSVITVDFKFVSLWNHASKALQHIGSFVDKYHGSVKLQSYMHVVIERIASMF

Query:  SLPDEAMPLMLKLELASDIGRTGRSYMLKIIQGIEEAIFFHLSEVYVR--VKKVNNLYFMLDISRLWQFKVSRDFIVPLGLLLDKNSSMVYGSITFLQRR
        SL DEAMPLMLKLELASDIGRTGRSYML I+QGI EAIFFHL EVYV    K V  L  +LD    +  K     I+P                      
Subjt:  SLPDEAMPLMLKLELASDIGRTGRSYMLKIIQGIEEAIFFHLSEVYVR--VKKVNNLYFMLDISRLWQFKVSRDFIVPLGLLLDKNSSMVYGSITFLQRR

Query:  ETTVGGAVRPDLGSGDGESTVRGGGARAGIRAARLDEAEDFEEVILRFALNIWDQIEKCLVFSASMLDKVLLDATMKALKLSVRSCSKESQNIIIQKAFD
                                          LDEA DFEEVI+R ALNIWDQIEKCLVFSASM +KV+LDATM ALKLSVRSCSKESQN IIQKA++
Subjt:  ETTVGGAVRPDLGSGDGESTVRGGGARAGIRAARLDEAEDFEEVILRFALNIWDQIEKCLVFSASMLDKVLLDATMKALKLSVRSCSKESQNIIIQKAFD

Query:  VLLTTSFSPLEVASSTTVPVQMEGLLLLQQDNSPLCRDEWILSLFASVIIALRPQTHVPDVRSVMHLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVS
        VLLT++FSP +VASST +PVQMEGL LLQQ +SP+CRDEWILSLFASVIIAL PQTHVP+VRSVMHLLM SIT+GCIPAAQALGSMINKLSLKSD+VEVS
Subjt:  VLLTTSFSPLEVASSTTVPVQMEGLLLLQQDNSPLCRDEWILSLFASVIIALRPQTHVPDVRSVMHLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVS

Query:  SYVSLEEAIDIIFKIKFRCFHNGSTRDGSEMFLTDLCSSIEKSSSLQVHAVVGLSWIGKGLLLCGHEKVRDVTMVLLECLLSKSRSDVSPLEQVILEKDC
        SYVSLEEAIDIIFK KFR  +  STRDGSEMFLTDLCSS   S   QVHAVVGLSWIGKGLLLCGHEKVRD+TMV LECLLSK R+D SPL+QV+LEKDC
Subjt:  SYVSLEEAIDIIFKIKFRCFHNGSTRDGSEMFLTDLCSSIEKSSSLQVHAVVGLSWIGKGLLLCGHEKVRDVTMVLLECLLSKSRSDVSPLEQVILEKDC

Query:  ETNLDFAVMKSAADAFHILMSDSEACLNRKFHAIVRPLYKQRFSSTMMPIFQSLVSKSDSSLSR
        ETNLDFAVMK AADAFHILM+DSE CLNRKFHAIVRPLYKQRFSSTMMPIFQSL+SKSDSSLSR
Subjt:  ETNLDFAVMKSAADAFHILMSDSEACLNRKFHAIVRPLYKQRFSSTMMPIFQSLVSKSDSSLSR

A0A6J1DMC8 MMS19 nucleotide excision repair protein

0.0e+00

73.61

Show/hide

Query:  GKEEDVDVKRNDLSQALMVWCAVFLSKWVLVDFGATGIELQQTSYFCGYRKLISCLCLMAFSSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVK
        G+EEDVDV+R+DLSQALM                                        MAFSSTP FEP+AIPLLLEKLSSSLPQAKIDSLKYLSDCTVK
Subjt:  GKEEDVDVKRNDLSQALMVWCAVFLSKWVLVDFGATGIELQQTSYFCGYRKLISCLCLMAFSSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVK

Query:  YGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQKMVVESNGLFIRLIINDEDIKDIFNILNIYTFYNDFPLQSRQRL
        YGADRMEKH EAIWSSLKEIIFTSIGQPSLSIN ++LNS     +EIT EAL LLQK++VESNGLF+ LIINDEDIKDIFNILNIYT YN+FP QSRQRL
Subjt:  YGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQKMVVESNGLFIRLIINDEDIKDIFNILNIYTFYNDFPLQSRQRL

Query:  NAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKISPSGNKNFGALYLCIELLAACRDLISSSDEHTCSVKEKSYSMLQTFSCSMVQLLN
        NAVG ILYN ANASVASCNEVFESFFPRLLDIVGI  +Q ++N+ISPSGN NFGALYLCIELLAACR LI S DEHT SVKEKS+SMLQTFSCSMVQ+L 
Subjt:  NAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKISPSGNKNFGALYLCIELLAACRDLISSSDEHTCSVKEKSYSMLQTFSCSMVQLLN

Query:  STFPGIIKKDLHDAEFYCAVKGLQNLATFPVDSSPVSSVVFEDILSTLMSVITVDFKFVSLWNHASKALQHIGSFVDKYHGSVKLQSYMHVVIERIASMF
        STFPGII+KDLHDAEFYCAVKGLQNLATFPVDSSPVS +VF+DIL  LMS ITVDFKF SLW HA KALQHIGSFVDKY GSV+ QSYMHVV+E IASMF
Subjt:  STFPGIIKKDLHDAEFYCAVKGLQNLATFPVDSSPVSSVVFEDILSTLMSVITVDFKFVSLWNHASKALQHIGSFVDKYHGSVKLQSYMHVVIERIASMF

Query:  SLPDEAMPLMLKLELASDIGRTGRSYMLKIIQGIEEAIFFHLSEVYVR--VKKVNNLYFMLDISRLWQFKVSRDFIVPLGLLLDKNSSMVYGSITFLQRR
        SL DEAMPLMLKLELASDIGRTGRSYML I+QGI EAIFFHL EVYV    K V  L  +LD    +  K     I+P                      
Subjt:  SLPDEAMPLMLKLELASDIGRTGRSYMLKIIQGIEEAIFFHLSEVYVR--VKKVNNLYFMLDISRLWQFKVSRDFIVPLGLLLDKNSSMVYGSITFLQRR

Query:  ETTVGGAVRPDLGSGDGESTVRGGGARAGIRAARLDEAEDFEEVILRFALNIWDQIEKCLVFSASMLDKVLLDATMKALKLSVRSCSKESQNIIIQKAFD
                                          LDEA DFEEVI+R ALNIWDQIEKCLVFSASM +KV+LDATM ALKLSVRSCSKESQN IIQKA++
Subjt:  ETTVGGAVRPDLGSGDGESTVRGGGARAGIRAARLDEAEDFEEVILRFALNIWDQIEKCLVFSASMLDKVLLDATMKALKLSVRSCSKESQNIIIQKAFD

Query:  VLLTTSFSPLEVASSTTVPVQMEGLLLLQQDNSPLCRDEWILSLFASVIIALRPQTHVPDVRSVMHLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVS
        VLLT++FSP +VASST +PVQMEGL LLQQ +SP+CRDEWILSLFASVIIAL PQTHVP+VRSVMHLLM SIT+GCIPAAQALGSMINKLSLKSD+VEVS
Subjt:  VLLTTSFSPLEVASSTTVPVQMEGLLLLQQDNSPLCRDEWILSLFASVIIALRPQTHVPDVRSVMHLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVS

Query:  SYVSLEEAIDIIFKIKFRCFHNGSTRDGSEMFLTDLCSSIEKSSSLQVHAVVGLSWIGKGLLLCGHEKVRDVTMVLLECLLSKSRSDVSPLEQVILEKDC
        SYVSLEEAIDIIFK KFR  +  STRDGSEMFLTDLCSS   S   QVHAVVGLSWIGKGLLLCGHEKVRD+TMV LECLLSK R+D SPL+QV+LEKDC
Subjt:  SYVSLEEAIDIIFKIKFRCFHNGSTRDGSEMFLTDLCSSIEKSSSLQVHAVVGLSWIGKGLLLCGHEKVRDVTMVLLECLLSKSRSDVSPLEQVILEKDC

Query:  ETNLDFAVMKSAADAFHILMSDSEACLNRKFHAIVRPLYKQRFSSTMMPIFQSLVSKSDSSLSR
        ETNLDFAVMK AADAFHILM+DSE CLNRKFHAIVRPLYKQRFSSTMMPIFQSL+SKSDSSLSR
Subjt:  ETNLDFAVMKSAADAFHILMSDSEACLNRKFHAIVRPLYKQRFSSTMMPIFQSLVSKSDSSLSR

A0A6J1JY03 MMS19 nucleotide excision repair protein

0.0e+00

73.32

Show/hide

Query:  GKEEDVDVKRNDLSQALMVWCAVFLSKWVLVDFGATGIELQQTSYFCGYRKLISCLCLMAFSSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVK
        GKEEDVDV RNDLSQALM                                        MAFSS P FEPFAIPLLLEKLSSSLP AKIDSLKYLSDCTVK
Subjt:  GKEEDVDVKRNDLSQALMVWCAVFLSKWVLVDFGATGIELQQTSYFCGYRKLISCLCLMAFSSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVK

Query:  YGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQKMVVESNGLFIRLIINDEDIKDIFNILNIYTFYNDFPLQSRQRL
        YGADRMEKH EA+WSS+KEIIFTSI QPSLS NLESL+S SFQGNE+  EALRLLQKMVV+SNG F+RLIINDEDIK+IFNILNIYT YND PLQSRQRL
Subjt:  YGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQKMVVESNGLFIRLIINDEDIKDIFNILNIYTFYNDFPLQSRQRL

Query:  NAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKISPSGNKNFGALYLCIELLAACRDLISSSDEHTCSVKEKSYSMLQTFSCSMVQLLN
        NAVGHILY SANASVASCN VFESFF RLLD VGI VDQS N KISPS N NFGALYLCIELLAACRDL +S DE TCSVKEKSY+MLQTFS S+VQLLN
Subjt:  NAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKISPSGNKNFGALYLCIELLAACRDLISSSDEHTCSVKEKSYSMLQTFSCSMVQLLN

Query:  STFPGIIKKDLHDAEFYCAVKGLQNLATFPVDSSPVSSVVFEDILSTLMSVITVDFKFVSLWNHASKALQHIGSFVDKYHGSVKLQSYMHVVIERIASMF
        STFPGI KK+LHDAEFYCAVKGL+NLATFPV SSPVSSVVFE+IL  LMS IT++ K  SLWNHA KALQHIGSFVD+YHGSV+ QSYMHVV+E+IA MF
Subjt:  STFPGIIKKDLHDAEFYCAVKGLQNLATFPVDSSPVSSVVFEDILSTLMSVITVDFKFVSLWNHASKALQHIGSFVDKYHGSVKLQSYMHVVIERIASMF

Query:  SLPDEAMPLMLKLELASDIGRTGRSYMLKIIQGIEEAIFFHLSEVYVRVKKVNNLYFMLDISRLWQFKVSRDFIVPLGLLLDKNSSMVYGSITFLQRRET
        SL DEA+PL LKL++ASDIGR+GRSYMLKI+QGIEEA  FHL+EVY                                   + NS  V   ++ L    T
Subjt:  SLPDEAMPLMLKLELASDIGRTGRSYMLKIIQGIEEAIFFHLSEVYVRVKKVNNLYFMLDISRLWQFKVSRDFIVPLGLLLDKNSSMVYGSITFLQRRET

Query:  TVGGAVRPDLGSGDGESTVRGGGARAGIRAARLDEAEDFEEVILRFALNIWDQIEKCLVFSASMLDKVLLDATMKALKLSVRSCSKESQNIIIQKAFDVL
         +                               DEA DFEEVILR   NIWDQIEKCLVFS SM DK LLDATM ALKLSVRSCSKESQNIIIQKAF+VL
Subjt:  TVGGAVRPDLGSGDGESTVRGGGARAGIRAARLDEAEDFEEVILRFALNIWDQIEKCLVFSASMLDKVLLDATMKALKLSVRSCSKESQNIIIQKAFDVL

Query:  LTTSFSPLEVASSTTVPVQMEGLLLLQQDNSPLCRDEWILSLFASVIIALRPQTHVPDVRSVMHLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVSSY
        LT+SFSP +VA STT+PVQMEGL LLQQ +SPL RDEWILSLFASVIIALRPQ HVPDVRSVM LLMLSITRGCIPAAQALGSMINKLSLK DKVEVS+Y
Subjt:  LTTSFSPLEVASSTTVPVQMEGLLLLQQDNSPLCRDEWILSLFASVIIALRPQTHVPDVRSVMHLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVSSY

Query:  VSLEEAIDIIFKIKFRCFHNGSTRDGSEMFLTDLCSSIEKSSSLQVHAVVGLSWIGKGLLLCGHEKVRDVTMVLLECLLSKSRSDVSPLEQVILEKDCET
        VSLEEAIDIIF  KFRCFHNGSTRDGSEM LTDLCSSIEK S L VH VVGLSWIGKGLLL GHEKVRDVTMV L+CL+SKSR+D SPL++VILEKDCET
Subjt:  VSLEEAIDIIFKIKFRCFHNGSTRDGSEMFLTDLCSSIEKSSSLQVHAVVGLSWIGKGLLLCGHEKVRDVTMVLLECLLSKSRSDVSPLEQVILEKDCET

Query:  NLDFAVMKSAADAFHILMSDSEACLNRKFHAIVRPLYKQRFSSTMMPIFQSLVSKSDSSLSR
        NLDFAVM  AADAFHILMSDSEACLNRKFHAI+RPLYKQRF STMMPIFQSLVSKSD SLSR
Subjt:  NLDFAVMKSAADAFHILMSDSEACLNRKFHAIVRPLYKQRFSSTMMPIFQSLVSKSDSSLSR

SwissProt top hits

e value

%identity

Alignment

E1BP36 MMS19 nucleotide excision repair protein homolog

6.0e-09

26.88

Show/hide

Query:  SSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVKYGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQKMVVE
        +STP F  F +PLL+EK+ S +  AK+DSL+ L+ C   YG   ++    ++W+S++  +F +  +   +  L +LNSL+             L + V+ 
Subjt:  SSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVKYGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQKMVVE

Query:  SNGLFIRLIINDEDIKDIF--NILNIYTFYNDFPLQSRQRLNAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKI
        ++          ED+ D F  NIL     +   P    + +     +L  +A AS  +C+ V  +  P LL+    H   +Q   I
Subjt:  SNGLFIRLIINDEDIKDIF--NILNIYTFYNDFPLQSRQRLNAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKI

Q0WVF8 MMS19 nucleotide excision repair protein homolog

2.4e-135

39.32

Show/hide

Query:  LMAFSSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVKYGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQK
        L+A SSTP FEP+AIPLLLEKLSSSLP AK+DSLK L DC +KYG DRM+KH  A+WS+LK+  ++S G   LS  +ESL S  F+ NEI  +A+ LLQ+
Subjt:  LMAFSSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVKYGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQK

Query:  MVVESNGLFIRLIINDEDIKDIFNILNIYTFYNDFPLQSRQRLNAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKISPSGNKN-----
        +V +    F+  +++D  I  +F+ +  Y  Y + P  S+  +  +  IL  SA ASV SCN +FE+ F RL++ +GI V+++    +  +GN       
Subjt:  MVVESNGLFIRLIINDEDIKDIFNILNIYTFYNDFPLQSRQRLNAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKISPSGNKN-----

Query:  -FGALYLCIELLAACRDLISSSDE--HTCSVKEKSYSMLQTFSCSMVQLLNSTFPGIIKKDLHDAEFYCAVKGLQNLATFPVDSSPVSSVVFEDILSTLM
          G L+LCIELLAA +DLI   +E   T        SM+++FS  ++Q+  S        D    + Y  VKGL  +  F   SSPVS   FE+IL TL 
Subjt:  -FGALYLCIELLAACRDLISSSDE--HTCSVKEKSYSMLQTFSCSMVQLLNSTFPGIIKKDLHDAEFYCAVKGLQNLATFPVDSSPVSSVVFEDILSTLM

Query:  SVITVDFKFVSLWNHASKALQHIGSFVDKYHGSVKLQSYMHVVIERIASMFSLPDEAMPLMLKLELASDIGRTGRSYMLKIIQGIEEAIFFHLSEVYVRV
        S+IT       +W  A KAL  IGSF+D+YH S K  SYM +V++ + S+       +P  + LE  S++  TG  Y+ K++QG+EEA    LS+ Y   
Subjt:  SVITVDFKFVSLWNHASKALQHIGSFVDKYHGSVKLQSYMHVVIERIASMFSLPDEAMPLMLKLELASDIGRTGRSYMLKIIQGIEEAIFFHLSEVYVRV

Query:  KKVNNLYFMLDISRLWQFKVSRDFIVPLGLLLDKNSSMVYGSITFLQRRETTVGGAVRPDLGSGDGESTVRGGGARAGIRAARLDEAEDFEEVILRFALN
          VN  +  +D                       N S +   +T            + P                       R+ E +  E++++ FA++
Subjt:  KKVNNLYFMLDISRLWQFKVSRDFIVPLGLLLDKNSSMVYGSITFLQRRETTVGGAVRPDLGSGDGESTVRGGGARAGIRAARLDEAEDFEEVILRFALN

Query:  IWDQIEKCLVFSASMLDKVLLDATMKALKLSVRSCSKESQNIIIQKAFDVLLTTSFSPLEVASSTTVPVQMEGLLLLQQDNSPLCRDEWILSLFASVIIA
        +W QIE C VFS     +  ++A M  ++  V     +SQN IIQKA+ V+ + +   +E     ++P+    L  LQ+D S   RDE ILSLFASVIIA
Subjt:  IWDQIEKCLVFSASMLDKVLLDATMKALKLSVRSCSKESQNIIIQKAFDVLLTTSFSPLEVASSTTVPVQMEGLLLLQQDNSPLCRDEWILSLFASVIIA

Query:  LRPQTHVPDVRSVMHLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVSSYVSLEEAIDIIFKIKF----RCFHNGSTR--DGSEMFLTDLCSSIEKSSS
          P   +PD +S++HLL++++ +G IPAAQALGSM+NKL   S     S   SLEEA  IIF   F    +   NGS +   GSE  ++ +C     S  
Subjt:  LRPQTHVPDVRSVMHLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVSSYVSLEEAIDIIFKIKF----RCFHNGSTR--DGSEMFLTDLCSSIEKSSS

Query:  LQVHAVVGLSWIGKGLLLCGHEKVRDVTMVLLECLLSKSRSDVSPLEQVILEKDCETNLDFAVMKSAADAFHILMSDSEACLNRKFHAIVRPLYKQRFSS
        LQ  A+ GL+WIGKGLL+ G+E+V ++ +VL+ECL S + S  +              L  + MK AADAF I+MSDSE CLNRKFHA++RPLYKQR  S
Subjt:  LQVHAVVGLSWIGKGLLLCGHEKVRDVTMVLLECLLSKSRSDVSPLEQVILEKDCETNLDFAVMKSAADAFHILMSDSEACLNRKFHAIVRPLYKQRFSS

Query:  TMMPIFQSLVSKSDSSLSR
        T++PI +SL+  S +SLSR
Subjt:  TMMPIFQSLVSKSDSSLSR

Q6DCF2 MMS19 nucleotide excision repair protein homolog

2.5e-07

Show/hide

Query:  SSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVKYGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLS
        +ST  F  F +PLL+EK+ S +  AK+DSL+ LS C   YG   +++    +WSS++  +F +  +   +  L +L +LS
Subjt:  SSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVKYGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLS

Q96T76 MMS19 nucleotide excision repair protein homolog

1.3e-08

26.88

Show/hide

Query:  SSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVKYGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQKMVVE
        +STP F  F +PLL+EK+ S +  AK+DSL+ L+ C   YG   ++    ++W+S++  +F +  +   +  L +L+SL+             L + V+ 
Subjt:  SSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVKYGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQKMVVE

Query:  SNGLFIRLIINDEDIKDIF--NILNIYTFYNDFPLQSRQRLNAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKI
        ++          ED+ D F  NIL     +   P    + +     +L  +A AS  +C+ V  +  P LL+    H   SQ   I
Subjt:  SNGLFIRLIINDEDIKDIF--NILNIYTFYNDFPLQSRQRLNAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKI

Q9D071 MMS19 nucleotide excision repair protein homolog

5.6e-07

33.75

Show/hide

Query:  SSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVKYGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLS
        +STP F  F +PLL+EK+ S +  AK+DSL+ L+ C   YG   ++    ++W+S++  +F +  +   +  L +L+SL+
Subjt:  SSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVKYGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLS

Arabidopsis top hits

e value

%identity

Alignment

AT5G48120.1 ARM repeat superfamily protein

1.7e-136

39.32

Show/hide

Query:  LMAFSSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVKYGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQK
        L+A SSTP FEP+AIPLLLEKLSSSLP AK+DSLK L DC +KYG DRM+KH  A+WS+LK+  ++S G   LS  +ESL S  F+ NEI  +A+ LLQ+
Subjt:  LMAFSSTPHFEPFAIPLLLEKLSSSLPQAKIDSLKYLSDCTVKYGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQK

Query:  MVVESNGLFIRLIINDEDIKDIFNILNIYTFYNDFPLQSRQRLNAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKISPSGNKN-----
        +V +    F+  +++D  I  +F+ +  Y  Y + P  S+  +  +  IL  SA ASV SCN +FE+ F RL++ +GI V+++    +  +GN       
Subjt:  MVVESNGLFIRLIINDEDIKDIFNILNIYTFYNDFPLQSRQRLNAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKISPSGNKN-----

Query:  -FGALYLCIELLAACRDLISSSDE--HTCSVKEKSYSMLQTFSCSMVQLLNSTFPGIIKKDLHDAEFYCAVKGLQNLATFPVDSSPVSSVVFEDILSTLM
          G L+LCIELLAA +DLI   +E   T        SM+++FS  ++Q+  S        D    + Y  VKGL  +  F   SSPVS   FE+IL TL 
Subjt:  -FGALYLCIELLAACRDLISSSDE--HTCSVKEKSYSMLQTFSCSMVQLLNSTFPGIIKKDLHDAEFYCAVKGLQNLATFPVDSSPVSSVVFEDILSTLM

Query:  SVITVDFKFVSLWNHASKALQHIGSFVDKYHGSVKLQSYMHVVIERIASMFSLPDEAMPLMLKLELASDIGRTGRSYMLKIIQGIEEAIFFHLSEVYVRV
        S+IT       +W  A KAL  IGSF+D+YH S K  SYM +V++ + S+       +P  + LE  S++  TG  Y+ K++QG+EEA    LS+ Y   
Subjt:  SVITVDFKFVSLWNHASKALQHIGSFVDKYHGSVKLQSYMHVVIERIASMFSLPDEAMPLMLKLELASDIGRTGRSYMLKIIQGIEEAIFFHLSEVYVRV

Query:  KKVNNLYFMLDISRLWQFKVSRDFIVPLGLLLDKNSSMVYGSITFLQRRETTVGGAVRPDLGSGDGESTVRGGGARAGIRAARLDEAEDFEEVILRFALN
          VN  +  +D                       N S +   +T            + P                       R+ E +  E++++ FA++
Subjt:  KKVNNLYFMLDISRLWQFKVSRDFIVPLGLLLDKNSSMVYGSITFLQRRETTVGGAVRPDLGSGDGESTVRGGGARAGIRAARLDEAEDFEEVILRFALN

Query:  IWDQIEKCLVFSASMLDKVLLDATMKALKLSVRSCSKESQNIIIQKAFDVLLTTSFSPLEVASSTTVPVQMEGLLLLQQDNSPLCRDEWILSLFASVIIA
        +W QIE C VFS     +  ++A M  ++  V     +SQN IIQKA+ V+ + +   +E     ++P+    L  LQ+D S   RDE ILSLFASVIIA
Subjt:  IWDQIEKCLVFSASMLDKVLLDATMKALKLSVRSCSKESQNIIIQKAFDVLLTTSFSPLEVASSTTVPVQMEGLLLLQQDNSPLCRDEWILSLFASVIIA

Query:  LRPQTHVPDVRSVMHLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVSSYVSLEEAIDIIFKIKF----RCFHNGSTR--DGSEMFLTDLCSSIEKSSS
          P   +PD +S++HLL++++ +G IPAAQALGSM+NKL   S     S   SLEEA  IIF   F    +   NGS +   GSE  ++ +C     S  
Subjt:  LRPQTHVPDVRSVMHLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVSSYVSLEEAIDIIFKIKF----RCFHNGSTR--DGSEMFLTDLCSSIEKSSS

Query:  LQVHAVVGLSWIGKGLLLCGHEKVRDVTMVLLECLLSKSRSDVSPLEQVILEKDCETNLDFAVMKSAADAFHILMSDSEACLNRKFHAIVRPLYKQRFSS
        LQ  A+ GL+WIGKGLL+ G+E+V ++ +VL+ECL S + S  +              L  + MK AADAF I+MSDSE CLNRKFHA++RPLYKQR  S
Subjt:  LQVHAVVGLSWIGKGLLLCGHEKVRDVTMVLLECLLSKSRSDVSPLEQVILEKDCETNLDFAVMKSAADAFHILMSDSEACLNRKFHAIVRPLYKQRFSS

Query:  TMMPIFQSLVSKSDSSLSR
        T++PI +SL+  S +SLSR
Subjt:  TMMPIFQSLVSKSDSSLSR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTCTGTTTTCTCTCTTGCTTGCTCTCTGTGCTAATATTGTTTCTATATGCTATTATTATCCAGGGAAAAGAGGAGGATGTAGATGTAAAAAGGAATGATCTTTCTCA
GGCACTTATGGTATGGTGTGCTGTTTTTTTGAGTAAGTGGGTATTGGTAGATTTTGGTGCCACTGGCATAGAATTGCAGCAAACTTCTTATTTTTGTGGTTATAGGAAAC
TGATTAGCTGCCTATGCCTGATGGCCTTCTCATCTACCCCACATTTTGAGCCATTTGCAATTCCTTTGCTTCTTGAGAAACTTTCATCCTCACTGCCACAAGCAAAGATT
GATTCTTTGAAGTATCTAAGCGATTGCACAGTAAAATATGGGGCAGATAGAATGGAAAAGCATTGTGAAGCTATCTGGTCTTCATTAAAGGAGATCATATTTACTTCCAT
AGGACAGCCTTCTTTGTCCATTAACTTGGAATCATTAAATAGTCTTAGCTTTCAAGGGAATGAAATAACGGCAGAAGCTCTAAGACTCCTGCAGAAGATGGTTGTGGAGA
GTAATGGCTTGTTTATAAGATTAATTATCAATGATGAAGATATAAAGGATATTTTCAACATCCTAAATATTTATACATTTTACAACGACTTCCCTCTGCAAAGCAGGCAG
AGACTAAATGCAGTTGGCCATATCCTTTACAATTCAGCGAATGCATCTGTTGCTTCCTGCAATGAAGTGTTTGAAAGTTTCTTCCCTCGATTGCTGGATATTGTGGGGAT
TCATGTGGATCAGTCTCAGAATAACAAAATTTCTCCCTCAGGGAATAAGAACTTTGGAGCCCTCTATCTCTGCATTGAACTTCTCGCTGCCTGCAGAGATCTGATTTCAA
GCTCTGATGAACATACATGCTCTGTTAAAGAGAAATCATACAGCATGCTTCAAACTTTTTCATGTTCAATGGTTCAGCTCCTCAATTCTACCTTTCCAGGAATTATTAAG
AAAGACCTGCATGATGCTGAATTCTACTGTGCAGTAAAGGGCCTGCAGAATCTGGCCACATTCCCTGTAGACTCTTCACCAGTATCAAGTGTCGTATTTGAGGATATCTT
GTCGACTCTCATGTCAGTTATAACAGTGGACTTCAAATTTGTATCTTTGTGGAATCATGCCTCGAAGGCATTACAGCATATTGGTTCATTTGTTGACAAATATCATGGGT
CTGTGAAATTGCAAAGTTATATGCATGTTGTTATTGAAAGGATTGCATCAATGTTTTCTCTCCCTGATGAGGCCATGCCATTGATGCTTAAACTTGAGCTGGCATCTGAC
ATTGGTAGAACTGGGCGAAGTTATATGCTGAAAATTATTCAGGGGATTGAAGAGGCAATATTCTTCCATTTATCTGAGGTTTATGTACGTGTTAAAAAAGTTAATAATCT
TTATTTTATGCTAGATATTTCTCGTCTATGGCAATTCAAAGTCAGTCGAGATTTTATTGTCCCTCTTGGATTGCTACTCGACAAAAATTCTTCCATGGTATATGGTTCTA
TTACATTCTTGCAGAGGAGAGAAACCACGGTGGGAGGTGCGGTGCGGCCGGATCTGGGCAGCGGAGATGGAGAGAGCACCGTGAGAGGAGGCGGCGCTCGCGCTGGGATT
CGGGCTGCACGGCTTGATGAAGCTGAAGATTTTGAGGAAGTCATATTGCGATTTGCATTAAACATTTGGGATCAGATTGAAAAATGTTTAGTTTTTAGTGCTTCGATGCT
AGATAAAGTGCTTCTAGATGCTACCATGAAGGCATTGAAACTCTCTGTTCGAAGTTGCTCCAAGGAGAGCCAGAACATTATAATCCAAAAAGCATTCGATGTATTATTAA
CAACCAGTTTTTCTCCTTTGGAAGTAGCATCATCTACTACAGTGCCAGTCCAGATGGAGGGCTTACTTCTGCTGCAGCAAGATAATAGTCCTCTTTGTAGAGATGAATGG
ATTCTTTCATTATTTGCATCGGTCATTATAGCACTTCGTCCACAAACACATGTTCCAGATGTAAGATCTGTAATGCATTTGCTTATGTTATCCATCACCAGAGGCTGTAT
ACCAGCGGCACAGGCACTGGGTTCTATGATCAATAAATTGAGTCTGAAATCTGATAAAGTAGAAGTCTCAAGTTATGTTTCTTTGGAAGAAGCAATTGACATTATTTTCA
AAATAAAATTTAGGTGCTTCCATAATGGAAGTACTCGTGACGGCAGTGAAATGTTTCTTACTGATTTATGCTCTAGCATTGAAAAAAGCTCTTCCCTTCAAGTTCATGCT
GTGGTTGGATTATCATGGATTGGAAAAGGTTTACTCCTTTGTGGTCATGAAAAGGTCCGAGATGTAACTATGGTTTTATTGGAGTGCTTACTATCAAAAAGCAGATCAGA
TGTTTCACCCTTGGAGCAGGTTATACTGGAAAAAGATTGCGAGACAAACTTAGACTTTGCAGTAATGAAAAGTGCAGCAGATGCATTTCACATTCTTATGAGTGATTCTG
AAGCTTGTTTGAACCGCAAATTCCATGCAATAGTACGACCACTTTATAAGCAGCGTTTTTCCTCTACCATGATGCCTATTTTCCAGTCTCTAGTAAGCAAATCAGATTCG
TCCCTTTCTAGGTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MVCFLSCLLSVLILFLYAIIIQGKEEDVDVKRNDLSQALMVWCAVFLSKWVLVDFGATGIELQQTSYFCGYRKLISCLCLMAFSSTPHFEPFAIPLLLEKLSSSLPQAKI
DSLKYLSDCTVKYGADRMEKHCEAIWSSLKEIIFTSIGQPSLSINLESLNSLSFQGNEITAEALRLLQKMVVESNGLFIRLIINDEDIKDIFNILNIYTFYNDFPLQSRQ
RLNAVGHILYNSANASVASCNEVFESFFPRLLDIVGIHVDQSQNNKISPSGNKNFGALYLCIELLAACRDLISSSDEHTCSVKEKSYSMLQTFSCSMVQLLNSTFPGIIK
KDLHDAEFYCAVKGLQNLATFPVDSSPVSSVVFEDILSTLMSVITVDFKFVSLWNHASKALQHIGSFVDKYHGSVKLQSYMHVVIERIASMFSLPDEAMPLMLKLELASD
IGRTGRSYMLKIIQGIEEAIFFHLSEVYVRVKKVNNLYFMLDISRLWQFKVSRDFIVPLGLLLDKNSSMVYGSITFLQRRETTVGGAVRPDLGSGDGESTVRGGGARAGI
RAARLDEAEDFEEVILRFALNIWDQIEKCLVFSASMLDKVLLDATMKALKLSVRSCSKESQNIIIQKAFDVLLTTSFSPLEVASSTTVPVQMEGLLLLQQDNSPLCRDEW
ILSLFASVIIALRPQTHVPDVRSVMHLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVSSYVSLEEAIDIIFKIKFRCFHNGSTRDGSEMFLTDLCSSIEKSSSLQVHA
VVGLSWIGKGLLLCGHEKVRDVTMVLLECLLSKSRSDVSPLEQVILEKDCETNLDFAVMKSAADAFHILMSDSEACLNRKFHAIVRPLYKQRFSSTMMPIFQSLVSKSDS
SLSR

Spg013719 (gene) of Sponge gourd (cylindrica) v1 genome