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Spg013799 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg013799
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein TOPLESS-like
Genome locationscaffold3:49871500..49877330
RNA-Seq ExpressionSpg013799
SyntenySpg013799
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0048731 - system development (biological process)
InterPro domainsIPR027728 - Topless family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER44102.1 transducin family protein / WD-40 repeat family protein [Striga asiatica]1.7e-1745.61Show/hide
Query:  VNLPVNVLPVSFADHGH---------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVVCLSCLRVGLECLGAS---YLAHIPVVTPIGVNLPVNVLPVSF
        VNLPVNVLPVSF  H H         DLPK V RT NQGSSPM  D HP+QQTLLL V  +   +GL  +G+     L +  V       LP   L  S 
Subjt:  VNLPVNVLPVSFADHGH---------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVVCLSCLRVGLECLGAS---YLAHIPVVTPIGVNLPVNVLPVSF

Query:  ADHGHDLPKAVMRTPNQGSSPMCMDFHPVQ----------QTLLLISMLIYTNSGSAILALASNAFHLLWK
        A         V+ +P+     +    H VQ          +  L IS LIYTNSGSAILALASNA HLLWK
Subjt:  ADHGHDLPKAVMRTPNQGSSPMCMDFHPVQ----------QTLLLISMLIYTNSGSAILALASNAFHLLWK

KAG7036524.1 Protein TOPLESS [Cucurbita argyrosperma subsp. argyrosperma]3.6e-1276.79Show/hide
Query:  VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI
        VNLPVNVLPVSFA HGH        DLPK VMRT NQGSSPM MDFHPVQQTLLL+
Subjt:  VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI

XP_019091004.1 PREDICTED: protein TOPLESS [Camelina sativa]2.0e-1535.92Show/hide
Query:  VNLPVNVLPVSFADHGH-----------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLV--------------------------------VCLSCLRVG
        VNL VN+LP+SF   GH           DLPK V RT +QGSSPM  D HP++QTLLL                                 V    +  G
Subjt:  VNLPVNVLPVSFADHGH-----------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLV--------------------------------VCLSCLRVG

Query:  LECLGASYLA-----------------------HIPVVT-PIG----VNLPVNVLPVSFADHGH-----------DLPKAVMRTPNQGSSPMCMDFHPVQ
           LG   ++                       H+   T P+G    VNL VN+LP+SF   GH           DLPK V RT +QGSSPM MDFHP++
Subjt:  LECLGASYLA-----------------------HIPVVT-PIG----VNLPVNVLPVSFADHGH-----------DLPKAVMRTPNQGSSPMCMDFHPVQ

Query:  QTLLLI
        QTLLL+
Subjt:  QTLLLI

XP_022153396.1 protein TOPLESS [Momordica charantia]3.6e-1271.43Show/hide
Query:  PIG----VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI
        PIG    VNLPVNVLPVSFA HGH        DLPK V+RT NQGSSPM MDFHPVQQTLLL+
Subjt:  PIG----VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI

XP_023523502.1 protein TOPLESS [Cucurbita pepo subsp. pepo]3.6e-1276.79Show/hide
Query:  VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI
        VNLPVNVLPVSFA HGH        DLPK VMRT NQGSSPM MDFHPVQQTLLL+
Subjt:  VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI

TrEMBL top hitse value%identityAlignment
A0A1S3BY14 protein TOPLESS3.0e-1268.33Show/hide
Query:  VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLISMLI
        VNLPVNVLPVSFA HGH        DLPK VMRT NQGSSP  MDFHP+QQTLLL+  ++
Subjt:  VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLISMLI

A0A5A7QGS6 Transducin family protein / WD-40 repeat family protein8.0e-1845.61Show/hide
Query:  VNLPVNVLPVSFADHGH---------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVVCLSCLRVGLECLGAS---YLAHIPVVTPIGVNLPVNVLPVSF
        VNLPVNVLPVSF  H H         DLPK V RT NQGSSPM  D HP+QQTLLL V  +   +GL  +G+     L +  V       LP   L  S 
Subjt:  VNLPVNVLPVSFADHGH---------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVVCLSCLRVGLECLGAS---YLAHIPVVTPIGVNLPVNVLPVSF

Query:  ADHGHDLPKAVMRTPNQGSSPMCMDFHPVQ----------QTLLLISMLIYTNSGSAILALASNAFHLLWK
        A         V+ +P+     +    H VQ          +  L IS LIYTNSGSAILALASNA HLLWK
Subjt:  ADHGHDLPKAVMRTPNQGSSPMCMDFHPVQ----------QTLLLISMLIYTNSGSAILALASNAFHLLWK

A0A6J1DKI7 protein TOPLESS1.7e-1271.43Show/hide
Query:  PIG----VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI
        PIG    VNLPVNVLPVSFA HGH        DLPK V+RT NQGSSPM MDFHPVQQTLLL+
Subjt:  PIG----VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI

A0A6J1GAU7 protein TOPLESS-like1.7e-1276.79Show/hide
Query:  VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI
        VNLPVNVLPVSFA HGH        DLPK VMRT NQGSSPM MDFHPVQQTLLL+
Subjt:  VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI

A0A6J1KEV5 protein TOPLESS-like1.7e-1276.79Show/hide
Query:  VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI
        VNLPVNVLPVSFA HGH        DLPK VMRT NQGSSPM MDFHPVQQTLLL+
Subjt:  VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI

SwissProt top hitse value%identityAlignment
Q0J7U6 Protein TOPLESS-RELATED PROTEIN 27.5e-0553.19Show/hide
Query:  VSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI
        VSF+   H        DLPK V+R  NQGS+ M +DFHPVQQT+LL+
Subjt:  VSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI

Q0WV90 Topless-related protein 11.1e-0856.9Show/hide
Query:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI
        V+L VN+LP++F    HGH        DLPK V RT +QGSSPM MDFHP++QTLLL+
Subjt:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI

Q10NY2 Protein TPR32.5e-0857.63Show/hide
Query:  PVVTPIGVNLPVNVLPVSF-ADHGH---DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI
        PV     VNLPVN+LPV++   H +   D  K V RT +QGS+PM MDFHPVQQTLLL+
Subjt:  PVVTPIGVNLPVNVLPVSF-ADHGH---DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI

Q10NY2 Protein TPR31.1e-0388.46Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LIYTNSG AILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

Q27GK7 Topless-related protein 42.1e-0754.55Show/hide
Query:  NLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI
        NLPVNVLPV++    H        DLPK V R  +QGS+   MDFHPVQQT+LL+
Subjt:  NLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI

Q94AI7 Protein TOPLESS7.8e-1060.34Show/hide
Query:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI
        VNL VN+LP+SF+   HGH        DLPK V RT +QGSSPM MDFHP++QTLLL+
Subjt:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI

Q94AI7 Protein TOPLESS1.1e-0384.62Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LI+TNSG+AILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

Arabidopsis top hitse value%identityAlignment
AT1G15750.1 Transducin family protein / WD-40 repeat family protein5.5e-1160.34Show/hide
Query:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI
        VNL VN+LP+SF+   HGH        DLPK V RT +QGSSPM MDFHP++QTLLL+
Subjt:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI

AT1G15750.1 Transducin family protein / WD-40 repeat family protein7.7e-0584.62Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LI+TNSG+AILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

AT1G15750.2 Transducin family protein / WD-40 repeat family protein5.5e-1160.34Show/hide
Query:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI
        VNL VN+LP+SF+   HGH        DLPK V RT +QGSSPM MDFHP++QTLLL+
Subjt:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI

AT1G15750.2 Transducin family protein / WD-40 repeat family protein7.7e-0584.62Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LI+TNSG+AILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

AT1G15750.3 Transducin family protein / WD-40 repeat family protein5.5e-1160.34Show/hide
Query:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI
        VNL VN+LP+SF+   HGH        DLPK V RT +QGSSPM MDFHP++QTLLL+
Subjt:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI

AT1G15750.3 Transducin family protein / WD-40 repeat family protein7.7e-0584.62Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LI+TNSG+AILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

AT1G15750.4 Transducin family protein / WD-40 repeat family protein5.5e-1160.34Show/hide
Query:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI
        VNL VN+LP+SF+   HGH        DLPK V RT +QGSSPM MDFHP++QTLLL+
Subjt:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI

AT1G15750.4 Transducin family protein / WD-40 repeat family protein7.7e-0584.62Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LI+TNSG+AILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

AT1G80490.1 TOPLESS-related 18.0e-1056.9Show/hide
Query:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI
        V+L VN+LP++F    HGH        DLPK V RT +QGSSPM MDFHP++QTLLL+
Subjt:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGATATAGCGAGTGGTGGTGATGTGCTAGATAAAACACCCAGTGAAGTTAGAGAGATAATTTCGAGCTTGGCAGTGTATGTTGGACTCATCGTATGGCGGGGACG
AAAGATGGAAATAGTTGATAAACTAGCTTTGGTTGATTCTATGTCAATTTCTATTTCCCCTGAGCTTACTAGTCCTGATTTGCATGAGTTAGATTTTGTAATTCCAATAG
TTGACCAATTTGTTGCTCAATATAAAGGAGCTGATAAAAAAGAAGATAAAGAAGAAGGATGTAATGAAAATCAAAGAGATCGATTTCGATTGGCGGTAAATCTACCGGTT
AATGTTCTGCCCGTATCATTTGCTGATCATGGTCATGATTTGCCAAAGGCTGTTATGCGAACACCGAATCAAGGGTCATCTCCAATGTGCACGGATATTCATCCGGTCCA
ACAAACTCTGCTATTGGTTGTGTGTCTTTCTTGCTTGAGAGTAGGACTTGAATGCCTAGGAGCGAGTTACTTAGCTCATATTCCTGTTGTCACCCCGATAGGTGTAAATC
TACCGGTTAATGTTCTGCCCGTATCATTTGCTGATCATGGTCATGATTTGCCAAAGGCTGTTATGCGAACACCGAATCAAGGGTCATCTCCAATGTGCATGGATTTTCAT
CCGGTCCAACAAACTCTGCTATTGATATCTATGTTGATCTACACAAATTCTGGAAGTGCAATCTTGGCATTGGCATCAAATGCATTTCACCTGCTATGGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGATATAGCGAGTGGTGGTGATGTGCTAGATAAAACACCCAGTGAAGTTAGAGAGATAATTTCGAGCTTGGCAGTGTATGTTGGACTCATCGTATGGCGGGGACG
AAAGATGGAAATAGTTGATAAACTAGCTTTGGTTGATTCTATGTCAATTTCTATTTCCCCTGAGCTTACTAGTCCTGATTTGCATGAGTTAGATTTTGTAATTCCAATAG
TTGACCAATTTGTTGCTCAATATAAAGGAGCTGATAAAAAAGAAGATAAAGAAGAAGGATGTAATGAAAATCAAAGAGATCGATTTCGATTGGCGGTAAATCTACCGGTT
AATGTTCTGCCCGTATCATTTGCTGATCATGGTCATGATTTGCCAAAGGCTGTTATGCGAACACCGAATCAAGGGTCATCTCCAATGTGCACGGATATTCATCCGGTCCA
ACAAACTCTGCTATTGGTTGTGTGTCTTTCTTGCTTGAGAGTAGGACTTGAATGCCTAGGAGCGAGTTACTTAGCTCATATTCCTGTTGTCACCCCGATAGGTGTAAATC
TACCGGTTAATGTTCTGCCCGTATCATTTGCTGATCATGGTCATGATTTGCCAAAGGCTGTTATGCGAACACCGAATCAAGGGTCATCTCCAATGTGCATGGATTTTCAT
CCGGTCCAACAAACTCTGCTATTGATATCTATGTTGATCTACACAAATTCTGGAAGTGCAATCTTGGCATTGGCATCAAATGCATTTCACCTGCTATGGAAATAG
Protein sequenceShow/hide protein sequence
MLDIASGGDVLDKTPSEVREIISSLAVYVGLIVWRGRKMEIVDKLALVDSMSISISPELTSPDLHELDFVIPIVDQFVAQYKGADKKEDKEEGCNENQRDRFRLAVNLPV
NVLPVSFADHGHDLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVVCLSCLRVGLECLGASYLAHIPVVTPIGVNLPVNVLPVSFADHGHDLPKAVMRTPNQGSSPMCMDFH
PVQQTLLLISMLIYTNSGSAILALASNAFHLLWK