; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg013801 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg013801
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold3:30184196..30192436
RNA-Seq ExpressionSpg013801
SyntenySpg013801
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR017956 - AT hook, DNA-binding motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACAAGACTGGCGTTCGTCGGCTGGACGGAGACGAAGAGAGATCAGAGAGAGAACAATCGATAGAGAAAAAGGAGAAGAGGGACTGACCGGAGACGGCAACTCGTG
TCAACGGGTTACGATGGTGGCTGGACGGCGACGTCACACGTCTTCCTCCTCTCAAACAAATTTACTGTCGGTGTCACATAAAGACGACTTCAAGCTTCGTCTCGTAACCA
AGATTCTCGACAAGATTACACTGTATCTACATGGACAACCGAAGAACATTCAGAAGCTCGAGCGAGTTTTGTCGACATCCACGGTAATTTTGGACCACCATGGTGTACAA
GGAGCTGGCGAGGACAACCGGGCGGAGATAGGACCAGGAGACGACCCAGAGGAAGACCGGACCACGTACGGTCGGCCTCGGCCTTGGGCCGAGGCCGAGCATAATGGTCG
GCCTCGGCCCAAGGTCGAGGCCGACCACTCGGCCCCCGTGCGCGGGCCGAGTCCGTTTGCCTCCGCTCGGTCCCTCCTGCCTCTGGCCGCCCCGGTTCCGCCTGGTTTGT
CCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAAGTCACGTCTTCCCCCGCTCTCAAATAAATTCACTGTCGATTATCACGTTGAGCGAAGGTGTTGAT
GCCAAAATTTGGCCAAGCGACTCACTTGACCTTCACGTGACACCAACGGTGAACTTATTTGAAGGGGAAAGACGTGACCTGCAAAACAAGAGAAAACTGTACATCGTTGA
GATAACCTGTGGCCTTGAGGAGGTTGTGGAGATGCGTCAAATCCTATGGAAAAATGCTGGGCCTTTGAGGGTGGAGCTCGGTCTTGGCCTCTGGATGGTCGGCCTCGGCC
TTGGCATGAGGTCAACCAGCTCCTCTGTGTTGTTTGCTTGCTTGTTTTCCATCCCAAGGGTGCCTGCACTCAGTTGGGGACTTGGGGAGGTTGAGGGCATGCGTCAACCT
CTCTTCAAGTGTTGTGTTGTGTCCATCCTAGGGGGGTGCGTACACTCTTTTGGGAAAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCGTGGTC
ATCCCAAGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTAAGAAATTCCCGGGCCTCTCTTCAAACATCGTGGTCATCCCAAGGGTGCGTACACTCTTCTG
GGGAAAAGCTTGGGGAGGCCTCGGAAGTTCCCATGCCTCTCTTCAAGCATCGTGGTCATCATAGGGTTCCCGGGCCTCTCTTCAAGCATCGTGGTCATCCTAGGGGTGCA
TACACTCTTCTGGGAAAAAGCTTGGGGAGGCCTAGGAAGTTCCCATGCCTCTCTTCAAGCATCATGGTCATCCCAGGGGTGCATACACCTTCTGGGAAAAAAGCTTGGGG
AGGCCTAAGAAGTTCTCGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGGGGTGCGAAGTTCATGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGTGGTGCACACACTC
TTTTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCTCGGGCCTCTCTTCAAGCATCGTGGTCATCCTAGAGGTGCGTACACTCTTCTGGGGAAAAAGCTTAGGGAGGCCT
AAGAAGTTCCCGGGCCTCTCTTCCAACATCGTGGTCATCCCAAGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCATGCCTCTCTTCAAGC
ATCGTGGTCATCCCAGGGGTGCGAAGTTCCCGAGCCTCTCTTCAAGCATCATGGTCATCCTAGGGGTGCATACACTCTTCTGGGAAAAAGCTTGGGGAGGCCTAGGAAGT
TCCCATGCCTCTCTTCAAGCATCATGGTCATCCTAGGGGTGCGTACACTCTTCTGGGAAAAAAGCTTGGGGAGGCCTAAGAAGTTCTCGGGCCTCTCTTCAAGCATCGTG
GTCATCCTAGGGGTCCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGCATCGTGGTCATCCCAG
GTGTGCTTACACTCTTCTTGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGGTGTGCTTACACTATTCTGGGGAATAG
CTTGGGGAGGCCTAAGAAGTTCTCGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGGGGGGTGCTTACACTCTTCTAGGGAAAAGCTTGGGGAGGACTAGGAAGTTCCCG
GGCCTCTCTTCAAGCATCGTGGTCATCCTAGGGGTGCGAATACTCTTCTGGGGAAAAGCTTGGAATCTCATCTCGAGGGTGCGTACACTCAGTCGAGGTCTTGGAATCTC
ATCTCGAGGGTGCGTACACTCAGTCGAGGTCTTGGAATCTCGTCTTGAGGGTGTGTACACTCATTCGAGGTCATGGAATTTCATCTCGAGGGTGCGTACACTCATTCGAG
GTTTTGGAATCTCATCTCGACTATGCGTACACTCGATCGAGGGCTTGGAGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAACAAGACTGGCGTTCGTCGGCTGGACGGAGACGAAGAGAGATCAGAGAGAGAACAATCGATAGAGAAAAAGGAGAAGAGGGACTGACCGGAGACGGCAACTCGTG
TCAACGGGTTACGATGGTGGCTGGACGGCGACGTCACACGTCTTCCTCCTCTCAAACAAATTTACTGTCGGTGTCACATAAAGACGACTTCAAGCTTCGTCTCGTAACCA
AGATTCTCGACAAGATTACACTGTATCTACATGGACAACCGAAGAACATTCAGAAGCTCGAGCGAGTTTTGTCGACATCCACGGTAATTTTGGACCACCATGGTGTACAA
GGAGCTGGCGAGGACAACCGGGCGGAGATAGGACCAGGAGACGACCCAGAGGAAGACCGGACCACGTACGGTCGGCCTCGGCCTTGGGCCGAGGCCGAGCATAATGGTCG
GCCTCGGCCCAAGGTCGAGGCCGACCACTCGGCCCCCGTGCGCGGGCCGAGTCCGTTTGCCTCCGCTCGGTCCCTCCTGCCTCTGGCCGCCCCGGTTCCGCCTGGTTTGT
CCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAAGTCACGTCTTCCCCCGCTCTCAAATAAATTCACTGTCGATTATCACGTTGAGCGAAGGTGTTGAT
GCCAAAATTTGGCCAAGCGACTCACTTGACCTTCACGTGACACCAACGGTGAACTTATTTGAAGGGGAAAGACGTGACCTGCAAAACAAGAGAAAACTGTACATCGTTGA
GATAACCTGTGGCCTTGAGGAGGTTGTGGAGATGCGTCAAATCCTATGGAAAAATGCTGGGCCTTTGAGGGTGGAGCTCGGTCTTGGCCTCTGGATGGTCGGCCTCGGCC
TTGGCATGAGGTCAACCAGCTCCTCTGTGTTGTTTGCTTGCTTGTTTTCCATCCCAAGGGTGCCTGCACTCAGTTGGGGACTTGGGGAGGTTGAGGGCATGCGTCAACCT
CTCTTCAAGTGTTGTGTTGTGTCCATCCTAGGGGGGTGCGTACACTCTTTTGGGAAAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCGTGGTC
ATCCCAAGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTAAGAAATTCCCGGGCCTCTCTTCAAACATCGTGGTCATCCCAAGGGTGCGTACACTCTTCTG
GGGAAAAGCTTGGGGAGGCCTCGGAAGTTCCCATGCCTCTCTTCAAGCATCGTGGTCATCATAGGGTTCCCGGGCCTCTCTTCAAGCATCGTGGTCATCCTAGGGGTGCA
TACACTCTTCTGGGAAAAAGCTTGGGGAGGCCTAGGAAGTTCCCATGCCTCTCTTCAAGCATCATGGTCATCCCAGGGGTGCATACACCTTCTGGGAAAAAAGCTTGGGG
AGGCCTAAGAAGTTCTCGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGGGGTGCGAAGTTCATGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGTGGTGCACACACTC
TTTTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCTCGGGCCTCTCTTCAAGCATCGTGGTCATCCTAGAGGTGCGTACACTCTTCTGGGGAAAAAGCTTAGGGAGGCCT
AAGAAGTTCCCGGGCCTCTCTTCCAACATCGTGGTCATCCCAAGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCATGCCTCTCTTCAAGC
ATCGTGGTCATCCCAGGGGTGCGAAGTTCCCGAGCCTCTCTTCAAGCATCATGGTCATCCTAGGGGTGCATACACTCTTCTGGGAAAAAGCTTGGGGAGGCCTAGGAAGT
TCCCATGCCTCTCTTCAAGCATCATGGTCATCCTAGGGGTGCGTACACTCTTCTGGGAAAAAAGCTTGGGGAGGCCTAAGAAGTTCTCGGGCCTCTCTTCAAGCATCGTG
GTCATCCTAGGGGTCCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGCATCGTGGTCATCCCAG
GTGTGCTTACACTCTTCTTGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGGTGTGCTTACACTATTCTGGGGAATAG
CTTGGGGAGGCCTAAGAAGTTCTCGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGGGGGGTGCTTACACTCTTCTAGGGAAAAGCTTGGGGAGGACTAGGAAGTTCCCG
GGCCTCTCTTCAAGCATCGTGGTCATCCTAGGGGTGCGAATACTCTTCTGGGGAAAAGCTTGGAATCTCATCTCGAGGGTGCGTACACTCAGTCGAGGTCTTGGAATCTC
ATCTCGAGGGTGCGTACACTCAGTCGAGGTCTTGGAATCTCGTCTTGAGGGTGTGTACACTCATTCGAGGTCATGGAATTTCATCTCGAGGGTGCGTACACTCATTCGAG
GTTTTGGAATCTCATCTCGACTATGCGTACACTCGATCGAGGGCTTGGAGAGCTAG
Protein sequenceShow/hide protein sequence
MEQDWRSSAGRRRREIRERTIDREKGEEGLTGDGNSCQRVTMVAGRRRHTSSSSQTNLLSVSHKDDFKLRLVTKILDKITLYLHGQPKNIQKLERVLSTSTVILDHHGVQ
GAGEDNRAEIGPGDDPEEDRTTYGRPRPWAEAEHNGRPRPKVEADHSAPVRGPSPFASARSLLPLAAPVPPGLSRNASEFLKTLGARASHVFPRSQINSLSIITLSEGVD
AKIWPSDSLDLHVTPTVNLFEGERRDLQNKRKLYIVEITCGLEEVVEMRQILWKNAGPLRVELGLGLWMVGLGLGMRSTSSSVLFACLFSIPRVPALSWGLGEVEGMRQP
LFKCCVVSILGGCVHSFGKKAWGGLGSSRASLQASWSSQGCVHSSGEKAWGGLRNSRASLQTSWSSQGCVHSSGEKLGEASEVPMPLFKHRGHHRVPGPLFKHRGHPRGA
YTLLGKSLGRPRKFPCLSSSIMVIPGVHTPSGKKAWGGLRSSRASLQASWSSQGCEVHGPLFKHRGHPSGAHTLLGKSLGRPRKFSGLSSSIVVILEVRTLFWGKSLGRP
KKFPGLSSNIVVIPRVRTLFWGKAWGGLGSSHASLQASWSSQGCEVPEPLFKHHGHPRGAYTLLGKSLGRPRKFPCLSSSIMVILGVRTLFWEKSLGRPKKFSGLSSSIV
VILGVRTLFWGKAWGGLGSSRASLQASWSSQHRGHPRCAYTLLGKSLGRPRKFPGLSSSIVVIPGVLTLFWGIAWGGLRSSRASLQASWSSQGGAYTLLGKSLGRTRKFP
GLSSSIVVILGVRILFWGKAWNLISRVRTLSRGLGISSRGCVHSVEVLESRLEGVYTHSRSWNFISRVRTLIRGFGISSRLCVHSIEGLES