; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg013838 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg013838
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionzinc finger protein GIS3-like
Genome locationscaffold3:45124826..45125335
RNA-Seq ExpressionSpg013838
SyntenySpg013838
Gene Ontology termsGO:0009736 - cytokinin-activated signaling pathway (biological process)
GO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0010090 - trichome morphogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044299 - Zinc finger protein GIS3/ZFP5/ZFP6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046676.1 zinc finger protein 6-like [Cucumis melo var. makuwa]2.0e-5973.8Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGGDP----NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYS
        MSN NPSSILKLFGFPLVEHDD P ETPDG GG      NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH      AAALRP  LYS
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGGDP----NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYS

Query:  SGFAGNI------GGGGGSRFLPRSGNGYFA--AAYGGVSAASGRWMFGNSGE------GCKMGGEKGSTDHVGVVDLHLKLSPSGS
        S F  N       GGGGGSR LPR+GNGYFA  AAYGGVSA+SGRWMFGNS E      GCK+GGEKG       VDLHLKLSPS S
Subjt:  SGFAGNI------GGGGGSRFLPRSGNGYFA--AAYGGVSAASGRWMFGNSGE------GCKMGGEKGSTDHVGVVDLHLKLSPSGS

KAG7025578.1 Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-6781.92Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGG-DPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAA-------ALRPA
        MSNQNPSSILKLFGFPLVEHDDLP  TPDG GG D NSD DRKFRCQFC RVFANSQALGGHQNAHKRERQRAKRALYFHASDH  AA       ALRP 
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGG-DPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAA-------ALRPA

Query:  PLYSSGFAGNIGGG-GGSRFLPRSGNGYFAAAYGGVSAASGRWMFGNSGEGCKMGGEKGSTDHVGVVDLHLKLSPSG
        P YSS F  NIGGG  G RFLPRS NGYF AAYGGVSA SGRWMFGNSGE    GGEKGSTD VGVVDLHLKLSPSG
Subjt:  PLYSSGFAGNIGGG-GGSRFLPRSGNGYFAAAYGGVSAASGRWMFGNSGEGCKMGGEKGSTDHVGVVDLHLKLSPSG

XP_008451655.1 PREDICTED: zinc finger protein 6-like [Cucumis melo]8.9e-6075Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGGDP----NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYS
        MSN NPSSILKLFGFPLVEHDD P ETPDG GG      NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH      AAALRP  LYS
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGGDP----NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYS

Query:  SGFAGNI---GGGGGSRFLPRSGNGYFA--AAYGGVSAASGRWMFGNSGE------GCKMGGEKGSTDHVGVVDLHLKLSPSGS
        S F  N    GGGGGSR LPR+GNGYFA  AAYGGVSA+SGRWMFGNS E      GCK+GGEKG       VDLHLKLSPS S
Subjt:  SGFAGNI---GGGGGSRFLPRSGNGYFA--AAYGGVSAASGRWMFGNSGE------GCKMGGEKGSTDHVGVVDLHLKLSPSGS

XP_023004876.1 zinc finger protein GIS3-like [Cucurbita maxima]5.2e-6882.56Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGG-DPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYSSGF
        MSNQNPS+ILKLFGFPLVEHDDLP  TPDG GG D NSD DRKFRCQFC RVFANSQALGGHQNAHKRERQRAKRALYFHASDH  AAALRP P YSS F
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGG-DPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYSSGF

Query:  AGNIGGGGGS---RFLPRSGNGYFAAAYGGVSAASGRWMFGNSGEGCKMGGEKGSTDHVGVVDLHLKLSPSG
          +IGGGGG    RFLPRS +GYF AAYGGVSA SGRWMFGNSGE    GGEKGSTD V VVDLHLKLSPSG
Subjt:  AGNIGGGGGS---RFLPRSGNGYFAAAYGGVSAASGRWMFGNSGEGCKMGGEKGSTDHVGVVDLHLKLSPSG

XP_023514545.1 zinc finger protein 6-like [Cucurbita pepo subsp. pepo]1.1e-6883.14Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGG-DPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYSSGF
        MSNQNPSSILKLFG PLVEHDDLP  TPDG GG D NSD DRKFRCQFC RVFANSQALGGHQNAHKRERQRAKRALYFHASDH  AAALRP P YSS F
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGG-DPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYSSGF

Query:  AGNIGGGGGS---RFLPRSGNGYFAAAYGGVSAASGRWMFGNSGEGCKMGGEKGSTDHVGVVDLHLKLSPSG
          NIGGGGG    RF+PRS NGYF AAYGGVS  SGRWMFGNSGE    GGEKGSTD VGVVDLHLKLSPSG
Subjt:  AGNIGGGGGS---RFLPRSGNGYFAAAYGGVSAASGRWMFGNSGEGCKMGGEKGSTDHVGVVDLHLKLSPSG

TrEMBL top hitse value%identityAlignment
A0A1S3BSU1 zinc finger protein 6-like4.3e-6075Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGGDP----NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYS
        MSN NPSSILKLFGFPLVEHDD P ETPDG GG      NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH      AAALRP  LYS
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGGDP----NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYS

Query:  SGFAGNI---GGGGGSRFLPRSGNGYFA--AAYGGVSAASGRWMFGNSGE------GCKMGGEKGSTDHVGVVDLHLKLSPSGS
        S F  N    GGGGGSR LPR+GNGYFA  AAYGGVSA+SGRWMFGNS E      GCK+GGEKG       VDLHLKLSPS S
Subjt:  SGFAGNI---GGGGGSRFLPRSGNGYFA--AAYGGVSAASGRWMFGNSGE------GCKMGGEKGSTDHVGVVDLHLKLSPSGS

A0A5D3D1T3 Zinc finger protein 6-like9.6e-6073.8Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGGDP----NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYS
        MSN NPSSILKLFGFPLVEHDD P ETPDG GG      NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH      AAALRP  LYS
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGGDP----NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYS

Query:  SGFAGNI------GGGGGSRFLPRSGNGYFA--AAYGGVSAASGRWMFGNSGE------GCKMGGEKGSTDHVGVVDLHLKLSPSGS
        S F  N       GGGGGSR LPR+GNGYFA  AAYGGVSA+SGRWMFGNS E      GCK+GGEKG       VDLHLKLSPS S
Subjt:  SGFAGNI------GGGGGSRFLPRSGNGYFA--AAYGGVSAASGRWMFGNSGE------GCKMGGEKGSTDHVGVVDLHLKLSPSGS

A0A6J1DIE9 zinc finger protein GIS3-like3.8e-5672.53Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGGDPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALR--------PA
        MSNQNPSSILKLFGFPLV+HDD+  E  DG+    NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH      A ALR        P 
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGGDPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALR--------PA

Query:  PLYSSGFAGNI---GGGGG----SRFLPRSGNGYFAAAYGGVSAASGRWMFGNSGEGCKMGGEKGSTDHVGVVDLHLKLSPS
        PLYS  FA NI   GGGGG    SRFLPR  NGYFAAAYG VSA+SGRW+FGNS       GEKGS+DHVGVVDLHLKLSPS
Subjt:  PLYSSGFAGNI---GGGGG----SRFLPRSGNGYFAAAYGGVSAASGRWMFGNSGEGCKMGGEKGSTDHVGVVDLHLKLSPS

A0A6J1JX90 zinc finger protein 6-like8.4e-5672.84Show/hide
Query:  NPSSILKLFGFPLVEHDDLPTETPDGSGGDPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYSSGFAGNIG
        N  SILKLFGFPLVEH+ +  ETP+GSGGD NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH        ALRP PLY++ +  NIG
Subjt:  NPSSILKLFGFPLVEHDDLPTETPDGSGGDPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYSSGFAGNIG

Query:  GGGGSRFLPRSGNGYFAAAYGGVSAASGRWMFGN-SGEGCKMGGEKGSTDHVGVVDLHLKLS
          G SR LPRS N YF AAYGGVSA+SGRWMFG     GCK+ GEKG  +HVG VDLHLKL+
Subjt:  GGGGSRFLPRSGNGYFAAAYGGVSAASGRWMFGN-SGEGCKMGGEKGSTDHVGVVDLHLKLS

A0A6J1KTC7 zinc finger protein GIS3-like2.5e-6882.56Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGG-DPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYSSGF
        MSNQNPS+ILKLFGFPLVEHDDLP  TPDG GG D NSD DRKFRCQFC RVFANSQALGGHQNAHKRERQRAKRALYFHASDH  AAALRP P YSS F
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGG-DPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYSSGF

Query:  AGNIGGGGGS---RFLPRSGNGYFAAAYGGVSAASGRWMFGNSGEGCKMGGEKGSTDHVGVVDLHLKLSPSG
          +IGGGGG    RFLPRS +GYF AAYGGVSA SGRWMFGNSGE    GGEKGSTD V VVDLHLKLSPSG
Subjt:  AGNIGGGGGS---RFLPRSGNGYFAAAYGGVSAASGRWMFGNSGEGCKMGGEKGSTDHVGVVDLHLKLSPSG

SwissProt top hitse value%identityAlignment
Q39264 Zinc finger protein 53.7e-0841.56Show/hide
Query:  SNQNPSSILKLFGFPLVEHDDLP----TETPDGSGGDPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR
        S  +    +KLFGF L+     P     E+   S    +    ++  CQ+C + FANSQALGGHQNAHK+ER + KR
Subjt:  SNQNPSSILKLFGFPLVEHDDLP----TETPDGSGGDPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR

Q39265 Zinc finger protein 62.5e-1241.84Show/hide
Query:  SSILKLFGFPLVEHDDLPTETPDGSGGDPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALY-----------FHASDHRFAAALRPAP
        +S LKLFG  L+E   +  ++ +   G  +  + RK+ CQ+C R FANSQALGGHQNAHK+ERQ  KRA             FH   +   +A  P P
Subjt:  SSILKLFGFPLVEHDDLPTETPDGSGGDPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALY-----------FHASDHRFAAALRPAP

Q39266 Zinc finger protein 72.8e-0838.71Show/hide
Query:  LVEHDDLPTETPDGSGGDPNSDDD--------------------------------RKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALY
        + E DD   ETP   GG+ +S+ D                                R F C +CRR F +SQALGGHQNAHKRER  AKRA++
Subjt:  LVEHDDLPTETPDGSGGDPNSDDD--------------------------------RKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALY

Q9C9H1 Zinc finger protein GIS32.0e-0940.4Show/hide
Query:  SNQNPSSILKLFGFPL-------------------VEHDDLPTETPDGSGGDPNS------DDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA
        S++  +S LKLFGF +                    E  + P  +   SGG   S        +RK+ CQ+C R F NSQALGGHQNAHK+ERQ+ KRA
Subjt:  SNQNPSSILKLFGFPL-------------------VEHDDLPTETPDGSGGDPNS------DDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA

Q9FG05 Zinc finger protein GIS24.4e-0939.33Show/hide
Query:  LKLFGFPL-VEHDDLPTETPDGSGGDPNSDD--DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR-------ALYFHASDHRFAAA
        ++LFGF     H++  ++       +   DD  +++F+C +C R F  SQALGGHQNAHKRERQ+ KR       A +FH   +  AA+
Subjt:  LKLFGFPL-VEHDDLPTETPDGSGGDPNSDD--DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR-------ALYFHASDHRFAAA

Arabidopsis top hitse value%identityAlignment
AT1G10480.1 zinc finger protein 52.6e-0941.56Show/hide
Query:  SNQNPSSILKLFGFPLVEHDDLP----TETPDGSGGDPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR
        S  +    +KLFGF L+     P     E+   S    +    ++  CQ+C + FANSQALGGHQNAHK+ER + KR
Subjt:  SNQNPSSILKLFGFPLVEHDDLP----TETPDGSGGDPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR

AT1G24625.1 zinc finger protein 72.0e-0938.71Show/hide
Query:  LVEHDDLPTETPDGSGGDPNSDDD--------------------------------RKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALY
        + E DD   ETP   GG+ +S+ D                                R F C +CRR F +SQALGGHQNAHKRER  AKRA++
Subjt:  LVEHDDLPTETPDGSGGDPNSDDD--------------------------------RKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALY

AT1G67030.1 zinc finger protein 61.8e-1341.84Show/hide
Query:  SSILKLFGFPLVEHDDLPTETPDGSGGDPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALY-----------FHASDHRFAAALRPAP
        +S LKLFG  L+E   +  ++ +   G  +  + RK+ CQ+C R FANSQALGGHQNAHK+ERQ  KRA             FH   +   +A  P P
Subjt:  SSILKLFGFPLVEHDDLPTETPDGSGGDPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALY-----------FHASDHRFAAALRPAP

AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein1.4e-1040.4Show/hide
Query:  SNQNPSSILKLFGFPL-------------------VEHDDLPTETPDGSGGDPNS------DDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA
        S++  +S LKLFGF +                    E  + P  +   SGG   S        +RK+ CQ+C R F NSQALGGHQNAHK+ERQ+ KRA
Subjt:  SNQNPSSILKLFGFPL-------------------VEHDDLPTETPDGSGGDPNS------DDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA

AT5G06650.1 C2H2 and C2HC zinc fingers superfamily protein3.1e-1039.33Show/hide
Query:  LKLFGFPL-VEHDDLPTETPDGSGGDPNSDD--DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR-------ALYFHASDHRFAAA
        ++LFGF     H++  ++       +   DD  +++F+C +C R F  SQALGGHQNAHKRERQ+ KR       A +FH   +  AA+
Subjt:  LKLFGFPL-VEHDDLPTETPDGSGGDPNSDD--DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR-------ALYFHASDHRFAAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAATCAAAACCCCTCCTCCATTCTAAAGCTGTTCGGGTTCCCACTGGTCGAACACGACGACCTTCCGACGGAGACGCCCGACGGCAGCGGCGGCGACCCCAACTC
TGACGACGACAGAAAGTTCCGGTGCCAATTCTGCCGCCGTGTTTTCGCCAACTCGCAGGCCCTCGGCGGCCACCAGAATGCGCACAAGAGAGAGCGCCAAAGGGCCAAAC
GCGCCCTTTATTTCCACGCCTCCGACCACCGCTTCGCCGCCGCACTCCGACCGGCGCCACTTTACTCCAGCGGTTTCGCGGGCAACATTGGCGGGGGTGGTGGTTCTAGA
TTTCTGCCTCGGAGCGGTAACGGCTACTTTGCTGCGGCGTACGGCGGCGTATCGGCGGCTTCAGGGCGGTGGATGTTTGGGAATTCGGGTGAAGGGTGTAAAATGGGAGG
TGAAAAGGGATCGACAGATCATGTGGGTGTTGTTGATCTTCATCTTAAACTTTCTCCATCTGGTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCAATCAAAACCCCTCCTCCATTCTAAAGCTGTTCGGGTTCCCACTGGTCGAACACGACGACCTTCCGACGGAGACGCCCGACGGCAGCGGCGGCGACCCCAACTC
TGACGACGACAGAAAGTTCCGGTGCCAATTCTGCCGCCGTGTTTTCGCCAACTCGCAGGCCCTCGGCGGCCACCAGAATGCGCACAAGAGAGAGCGCCAAAGGGCCAAAC
GCGCCCTTTATTTCCACGCCTCCGACCACCGCTTCGCCGCCGCACTCCGACCGGCGCCACTTTACTCCAGCGGTTTCGCGGGCAACATTGGCGGGGGTGGTGGTTCTAGA
TTTCTGCCTCGGAGCGGTAACGGCTACTTTGCTGCGGCGTACGGCGGCGTATCGGCGGCTTCAGGGCGGTGGATGTTTGGGAATTCGGGTGAAGGGTGTAAAATGGGAGG
TGAAAAGGGATCGACAGATCATGTGGGTGTTGTTGATCTTCATCTTAAACTTTCTCCATCTGGTTCATGA
Protein sequenceShow/hide protein sequence
MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGGDPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYSSGFAGNIGGGGGSR
FLPRSGNGYFAAAYGGVSAASGRWMFGNSGEGCKMGGEKGSTDHVGVVDLHLKLSPSGS