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Spg013846 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg013846
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionAuxin-responsive protein
Genome locationscaffold3:34800005..34804317
RNA-Seq ExpressionSpg013846
SyntenySpg013846
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147251.1 auxin-responsive protein IAA4 [Momordica charantia]6.5e-0681.08Show/hide
Query:  AQIVGWPPVQSFRRNTLQGKK--TAAPESTGNYVKVN
        AQIVGWPPVQSFRRN+LQ KK   AAPES+GNYVKV+
Subjt:  AQIVGWPPVQSFRRNTLQGKK--TAAPESTGNYVKVN
XP_022974462.1 auxin-responsive protein IAA4-like [Cucurbita maxima]2.2e-0680Show/hide
Query:  AQIVGWPPVQSFRRNTLQGKKTAAP-----ESTGNYVKVN
        AQIVGWPPVQSFRRN+LQGKKTAA      ESTGNYVKV+
Subjt:  AQIVGWPPVQSFRRNTLQGKKTAAP-----ESTGNYVKVN
XP_022975581.1 auxin-responsive protein IAA3-like, partial [Cucurbita maxima]1.3e-0684.21Show/hide
Query:  AQIVGWPPVQSFRRNTLQGKKTAAP---ESTGNYVKVN
        AQIVGWPPVQSFRRN+LQGKKTAA    ESTGNYVKV+
Subjt:  AQIVGWPPVQSFRRNTLQGKKTAAP---ESTGNYVKVN
XP_023539145.1 auxin-responsive protein IAA4-like [Cucurbita pepo subsp. pepo]2.2e-0680Show/hide
Query:  AQIVGWPPVQSFRRNTLQGKKTAAP-----ESTGNYVKVN
        AQIVGWPPVQSFRRN+LQGKKTAA      ESTGNYVKV+
Subjt:  AQIVGWPPVQSFRRNTLQGKKTAAP-----ESTGNYVKVN
XP_038877087.1 auxin-responsive protein IAA4-like [Benincasa hispida]1.0e-0682.05Show/hide
Query:  AQIVGWPPVQSFRRNTLQGKK----TAAPESTGNYVKVN
        AQIVGWPPVQSFRRN LQGKK    TAAPES+GNYVKV+
Subjt:  AQIVGWPPVQSFRRNTLQGKK----TAAPESTGNYVKVN
TrEMBL top hitse value%identityAlignment
A0A6J1D1T0 Auxin-responsive protein3.1e-0681.08Show/hide
Query:  AQIVGWPPVQSFRRNTLQGKK--TAAPESTGNYVKVN
        AQIVGWPPVQSFRRN+LQ KK   AAPES+GNYVKV+
Subjt:  AQIVGWPPVQSFRRNTLQGKK--TAAPESTGNYVKVN
A0A6J1FRY1 Auxin-responsive protein7.0e-0657.81Show/hide
Query:  AQIVGWPPVQSFRRNTLQGKKTAAP-----ESTGNYVKVNTPKEIYKG----SEYNVYVVVLEA
        AQIVGWPPVQSFRRN+LQGKKTAA      EST NYVKV+     Y      S Y  Y  +L+A
Subjt:  AQIVGWPPVQSFRRNTLQGKKTAAP-----ESTGNYVKVNTPKEIYKG----SEYNVYVVVLEA
A0A6J1IAA9 Auxin-responsive protein1.1e-0680Show/hide
Query:  AQIVGWPPVQSFRRNTLQGKKTAAP-----ESTGNYVKVN
        AQIVGWPPVQSFRRN+LQGKKTAA      ESTGNYVKV+
Subjt:  AQIVGWPPVQSFRRNTLQGKKTAAP-----ESTGNYVKVN
A0A6J1IEL3 Auxin-responsive protein6.3e-0784.21Show/hide
Query:  AQIVGWPPVQSFRRNTLQGKKTAAP---ESTGNYVKVN
        AQIVGWPPVQSFRRN+LQGKKTAA    ESTGNYVKV+
Subjt:  AQIVGWPPVQSFRRNTLQGKKTAAP---ESTGNYVKVN
A0A6J1IXI2 Auxin-responsive protein1.2e-0576.92Show/hide
Query:  AQIVGWPPVQSFRRNTLQGKK----TAAPESTGNYVKVN
        AQIVGWPPVQSFRRN+LQ KK    TAA ES+GNYVKV+
Subjt:  AQIVGWPPVQSFRRNTLQGKK----TAAPESTGNYVKVN
SwissProt top hitse value%identityAlignment
O24542 Auxin-induced protein 22D1.7e-0454.29Show/hide
Query:  AQIVGWPPVQSFRRNTLQGKKTAAPESTGNYVKVN
        AQ+VGWPP++S+R+N +Q KK    E  G YVKV+
Subjt:  AQIVGWPPVQSFRRNTLQGKKTAAPESTGNYVKVN
O24543 Auxin-induced protein 22E1.3e-0455.88Show/hide
Query:  QIVGWPPVQSFRRNTLQGKKTAAPESTGNYVKVN
        Q+VGWPP++SFR+N+LQ KK    + TG Y+KV+
Subjt:  QIVGWPPVQSFRRNTLQGKKTAAPESTGNYVKVN
P33077 Auxin-responsive protein IAA49.8e-0562.86Show/hide
Query:  AQIVGWPPVQSFRRNTLQGKKTAAPESTGNYVKVN
        AQIVGWPPV+S+R+N +Q KK+ + E  GNYVKV+
Subjt:  AQIVGWPPVQSFRRNTLQGKKTAAPESTGNYVKVN
Q38822 Auxin-responsive protein IAA38.3e-0458.33Show/hide
Query:  AQIVGWPPVQSFRRNTLQGKKTAAP-ESTGNYVKVN
        AQIVGWPPV+S+R+N +Q KK  +  E  G YVKV+
Subjt:  AQIVGWPPVQSFRRNTLQGKKTAAP-ESTGNYVKVN
Arabidopsis top hitse value%identityAlignment
AT1G04240.1 AUX/IAA transcriptional regulator family protein5.9e-0558.33Show/hide
Query:  AQIVGWPPVQSFRRNTLQGKKTAAP-ESTGNYVKVN
        AQIVGWPPV+S+R+N +Q KK  +  E  G YVKV+
Subjt:  AQIVGWPPVQSFRRNTLQGKKTAAP-ESTGNYVKVN
AT3G04730.1 indoleacetic acid-induced protein 168.5e-0448.72Show/hide
Query:  KVVYPLIERIVAQIVGWPPVQSFRRNTLQGKKTAAPEST
        KVV P  +   AQ+VGWPPV+SFR+N + G+K    ++T
Subjt:  KVVYPLIERIVAQIVGWPPVQSFRRNTLQGKKTAAPEST
AT5G43700.1 AUX/IAA transcriptional regulator family protein6.9e-0662.86Show/hide
Query:  AQIVGWPPVQSFRRNTLQGKKTAAPESTGNYVKVN
        AQIVGWPPV+S+R+N +Q KK+ + E  GNYVKV+
Subjt:  AQIVGWPPVQSFRRNTLQGKKTAAPESTGNYVKVN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGTCGTCGGCGCGATGCGAGAGGTAGGGATTGGTATACACTCTGTGTTGGGGGTGGAAAATGGTGGGAAATGGAGGATTAAGTCTTTCAAGGTAGTATATCCTCT
GATTGAGAGGATTGTAGCTCAGATTGTGGGGTGGCCGCCGGTTCAATCGTTTAGAAGAAACACCCTTCAAGGGAAGAAGACGGCGGCGCCGGAGAGTACTGGAAATTACG
TGAAAGTGAATACTCCGAAAGAGATCTACAAAGGATCTGAATATAATGTTTATGTCGTCGTGCTAGAGGCTGAGAATCATGAAAGGATCCGAAGCAAAGGGATTAGGCTG
TGTTGCATGAAAAATCAGAGCCAAAAAGAAGCTTTATTATTACAATCAGAAGCACAAAAAAAGGATTCAGAGAAGGAAAATTGGGGCTTGGGTACTCGAGGAAGAAGAAA
AATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGGTCGTCGGCGCGATGCGAGAGGTAGGGATTGGTATACACTCTGTGTTGGGGGTGGAAAATGGTGGGAAATGGAGGATTAAGTCTTTCAAGGTAGTATATCCTCT
GATTGAGAGGATTGTAGCTCAGATTGTGGGGTGGCCGCCGGTTCAATCGTTTAGAAGAAACACCCTTCAAGGGAAGAAGACGGCGGCGCCGGAGAGTACTGGAAATTACG
TGAAAGTGAATACTCCGAAAGAGATCTACAAAGGATCTGAATATAATGTTTATGTCGTCGTGCTAGAGGCTGAGAATCATGAAAGGATCCGAAGCAAAGGGATTAGGCTG
TGTTGCATGAAAAATCAGAGCCAAAAAGAAGCTTTATTATTACAATCAGAAGCACAAAAAAAGGATTCAGAGAAGGAAAATTGGGGCTTGGGTACTCGAGGAAGAAGAAA
AATGTAG
Protein sequenceShow/hide protein sequence
MWVVGAMREVGIGIHSVLGVENGGKWRIKSFKVVYPLIERIVAQIVGWPPVQSFRRNTLQGKKTAAPESTGNYVKVNTPKEIYKGSEYNVYVVVLEAENHERIRSKGIRL
CCMKNQSQKEALLLQSEAQKKDSEKENWGLGTRGRRKM