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Spg013867 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg013867
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontype IV secretion system protein virB10-like
Genome locationscaffold3:35867177..35867578
RNA-Seq ExpressionSpg013867
SyntenySpg013867
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571994.1 hypothetical protein SDJN03_28722, partial [Cucurbita argyrosperma subsp. sororia]1.9e-4981.34Show/hide
Query:  MSTPVDQLQPPPLAAAAPHPAQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLD-PPPPPPHLRRPPQLEAVPM
        MSTPVDQLQPPP A    H   GSVGPVIAVLAVISILGVIAG+IGRLCSGRPVFGYGAHYDVE+WVEKKCASCLDGSLD PPPPPPHLR PP L+AVP+
Subjt:  MSTPVDQLQPPPLAAAAPHPAQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLD-PPPPPPHLRRPPQLEAVPM

Query:  AEPLGGPPEIKEGGDGDGERENLQPAPPGSGGES
         EPLGGPPEIK+G   D +RENLQ A PG+GGES
Subjt:  AEPLGGPPEIKEGGDGDGERENLQPAPPGSGGES

KAG6588645.1 hypothetical protein SDJN03_17210, partial [Cucurbita argyrosperma subsp. sororia]3.0e-5081.95Show/hide
Query:  MSTPVDQLQPPPLAAAAPHPAQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPQLEAVPMA
        MS PVDQLQPPP +AAA HPAQGSVGPVIAVLAVISILG IAGMIGR+C GRPVFGY AHYDVEDWVEKKCA+CLDGSLD   PPPHLR PP +EA+P++
Subjt:  MSTPVDQLQPPPLAAAAPHPAQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPQLEAVPMA

Query:  EPLGGPPEIKEGGDGDGERENLQPAPPGSGGES
        EPLG PP IKEGGDGD ERENLQ   PGSGGES
Subjt:  EPLGGPPEIKEGGDGDGERENLQPAPPGSGGES

XP_022927713.1 uncharacterized protein LOC111434531 [Cucurbita moschata]3.0e-5081.95Show/hide
Query:  MSTPVDQLQPPPLAAAAPHPAQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPQLEAVPMA
        MS P+DQLQPPP +AAA HPAQGSVGPVIAVLAVISILG IAGMIGR+C GRPVFGY A YDVEDWVEKKCASCLDGSLD   PPPHLR PP +EA+P++
Subjt:  MSTPVDQLQPPPLAAAAPHPAQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPQLEAVPMA

Query:  EPLGGPPEIKEGGDGDGERENLQPAPPGSGGES
        EPLGGPP IKEGGDGD ERENLQ   PGSGGES
Subjt:  EPLGGPPEIKEGGDGDGERENLQPAPPGSGGES

XP_022989510.1 uncharacterized protein LOC111486567 [Cucurbita maxima]2.3e-5082.71Show/hide
Query:  MSTPVDQLQPPPLAAAAPHPAQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPQLEAVPMA
        MS P+DQLQPPP AAAA HPAQGSVGPVIAVLAVISILG IAGMIGR+C GRPVFGY AHYDVEDWVEKKCA+CLDGSLD   PPP LR PP +EA+P+A
Subjt:  MSTPVDQLQPPPLAAAAPHPAQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPQLEAVPMA

Query:  EPLGGPPEIKEGGDGDGERENLQPAPPGSGGES
        EPLGGPP IKE GDGD ERENLQ  PPGSGGES
Subjt:  EPLGGPPEIKEGGDGDGERENLQPAPPGSGGES

XP_023530142.1 uncharacterized protein LOC111792788 [Cucurbita pepo subsp. pepo]6.0e-5183.46Show/hide
Query:  MSTPVDQLQPPPLAAAAPHPAQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPQLEAVPMA
        MS P+DQLQPPP +AAA HPAQGSVGPVIAVLAVISILG IAGMIGR+C GRPVFGY AHYDVEDWVEKKCASCLDGSLD   PPPHLR PP +EA+P+A
Subjt:  MSTPVDQLQPPPLAAAAPHPAQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPQLEAVPMA

Query:  EPLGGPPEIKEGGDGDG--ERENLQPAPPGSGG
        EPLGGPP IKEGGDGDG  ERENLQ  PPGSGG
Subjt:  EPLGGPPEIKEGGDGDG--ERENLQPAPPGSGG

TrEMBL top hitse value%identityAlignment
A0A5A7SPN0 Type IV secretion system protein virB10-like1.8e-4877.54Show/hide
Query:  MSTPVDQLQPPPLAAAAPHPAQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLD----PPPPPPHLRRPPQLEA
        MSTP+DQLQPPP      H +  SVGP+IAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLD    PPPPPPHLR PP L++
Subjt:  MSTPVDQLQPPPLAAAAPHPAQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLD----PPPPPPHLRRPPQLEA

Query:  VPMAEPLGG-PPEIKEGGDGDGERENLQPAPPGSGGES
        VP+AEPLGG PPEIK+G D D + ENLQ A PG+GGES
Subjt:  VPMAEPLGG-PPEIKEGGDGDGERENLQPAPPGSGGES

A0A6J1ELS6 uncharacterized protein LOC1114345311.4e-5081.95Show/hide
Query:  MSTPVDQLQPPPLAAAAPHPAQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPQLEAVPMA
        MS P+DQLQPPP +AAA HPAQGSVGPVIAVLAVISILG IAGMIGR+C GRPVFGY A YDVEDWVEKKCASCLDGSLD   PPPHLR PP +EA+P++
Subjt:  MSTPVDQLQPPPLAAAAPHPAQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPQLEAVPMA

Query:  EPLGGPPEIKEGGDGDGERENLQPAPPGSGGES
        EPLGGPP IKEGGDGD ERENLQ   PGSGGES
Subjt:  EPLGGPPEIKEGGDGDGERENLQPAPPGSGGES

A0A6J1GL66 uncharacterized protein LOC1114553837.9e-4981.06Show/hide
Query:  MSTPVDQLQPPPLAAAAPHPAQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLD-PPPPPPHLRRPPQLEAVPM
        MSTPVDQLQPPP A    H   GSVGPVIAVLAVISILGVIAG+IGRLCSGRPVFGYGAHYDVE+WVEKKCASCLDGSLD PPPPPPHLR PP L+AVP+
Subjt:  MSTPVDQLQPPPLAAAAPHPAQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLD-PPPPPPHLRRPPQLEAVPM

Query:  AEPLGGPPEIKEGGDGDGERENLQPAPPGSGG
         EPLGGPPEIK+G   D +RENLQ A PG+GG
Subjt:  AEPLGGPPEIKEGGDGDGERENLQPAPPGSGG

A0A6J1IBA8 uncharacterized protein LOC1114709401.0e-4880.15Show/hide
Query:  MSTPVDQLQPPPLAAAAPHPAQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPQLEAVPMA
        MSTP DQLQPPP A    H   GSVGPVIAVLAVISILGVIAG+IGRLCSGRPVFGYGAHYDVE+WVEKKCASCLDGSLDPPPPP HLR PP L+AVP+ 
Subjt:  MSTPVDQLQPPPLAAAAPHPAQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPQLEAVPMA

Query:  EPLGGPPEIKEGGDGDGERENLQPAPPGSGG
        EPLGGPPEIK+G   D +RENLQ A PG+GG
Subjt:  EPLGGPPEIKEGGDGDGERENLQPAPPGSGG

A0A6J1JMK0 uncharacterized protein LOC1114865671.1e-5082.71Show/hide
Query:  MSTPVDQLQPPPLAAAAPHPAQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPQLEAVPMA
        MS P+DQLQPPP AAAA HPAQGSVGPVIAVLAVISILG IAGMIGR+C GRPVFGY AHYDVEDWVEKKCA+CLDGSLD   PPP LR PP +EA+P+A
Subjt:  MSTPVDQLQPPPLAAAAPHPAQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPQLEAVPMA

Query:  EPLGGPPEIKEGGDGDGERENLQPAPPGSGGES
        EPLGGPP IKE GDGD ERENLQ  PPGSGGES
Subjt:  EPLGGPPEIKEGGDGDGERENLQPAPPGSGGES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G26520.1 unknown protein4.0e-1335.38Show/hide
Query:  QPPPL------AAAAPHPAQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPQ-----LEAV
        QPPP       +++       ++GP IAV  V+++L V+A +IGRLCSG+ + GYG  YD+E W E +C SC+DG + P  P P    PP+       + 
Subjt:  QPPPL------AAAAPHPAQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPQ-----LEAV

Query:  PMAEPLGGPPEIKEGGDGDGERENLQPAPP
          AE  G   ++    DG+ ++++L   PP
Subjt:  PMAEPLGGPPEIKEGGDGDGERENLQPAPP

AT3G57500.1 unknown protein2.9e-1140.7Show/hide
Query:  LQPPPLAAAAPHPAQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSL-------DPPPPPP
        + PP     + +    S+  ++ VLAVI+IL V+AG+  RLC GR +  +G  +D+E WVE+KC SC+D  +        PPPPPP
Subjt:  LQPPPLAAAAPHPAQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSL-------DPPPPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACTCCCGTCGACCAGCTCCAGCCCCCGCCGCTCGCCGCCGCCGCCCCACATCCCGCCCAGGGCTCCGTCGGCCCGGTCATCGCCGTCCTCGCCGTGATTTCCAT
CCTCGGCGTCATTGCCGGCATGATCGGCCGCCTCTGCTCCGGCCGCCCCGTCTTCGGCTACGGCGCCCACTACGACGTCGAAGATTGGGTCGAGAAGAAATGTGCTTCCT
GCCTCGATGGGTCCCTCGACCCTCCTCCTCCTCCGCCGCATCTCCGCCGTCCGCCGCAGCTCGAGGCCGTTCCTATGGCGGAACCGCTCGGTGGGCCGCCGGAAATCAAG
GAAGGCGGCGATGGCGATGGCGAACGCGAGAATTTGCAGCCGGCGCCTCCTGGAAGCGGCGGTGAGTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCACTCCCGTCGACCAGCTCCAGCCCCCGCCGCTCGCCGCCGCCGCCCCACATCCCGCCCAGGGCTCCGTCGGCCCGGTCATCGCCGTCCTCGCCGTGATTTCCAT
CCTCGGCGTCATTGCCGGCATGATCGGCCGCCTCTGCTCCGGCCGCCCCGTCTTCGGCTACGGCGCCCACTACGACGTCGAAGATTGGGTCGAGAAGAAATGTGCTTCCT
GCCTCGATGGGTCCCTCGACCCTCCTCCTCCTCCGCCGCATCTCCGCCGTCCGCCGCAGCTCGAGGCCGTTCCTATGGCGGAACCGCTCGGTGGGCCGCCGGAAATCAAG
GAAGGCGGCGATGGCGATGGCGAACGCGAGAATTTGCAGCCGGCGCCTCCTGGAAGCGGCGGTGAGTCGTGA
Protein sequenceShow/hide protein sequence
MSTPVDQLQPPPLAAAAPHPAQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPQLEAVPMAEPLGGPPEIK
EGGDGDGERENLQPAPPGSGGES