; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg013880 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg013880
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionubiquitin fusion degradation 1
Genome locationscaffold3:40477898..40484215
RNA-Seq ExpressionSpg013880
SyntenySpg013880
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
InterPro domainsIPR004854 - Ubiquitin fusion degradation protein Ufd1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022969437.1 ubiquitin recognition factor in ER-associated degradation protein 1-like isoform X1 [Cucurbita maxima]6.4e-3356.67Show/hide
Query:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN
        MLFEFRNDA ERVSHCGVLEF+                                                        ETTL NFSCLTTGDS MVAY N
Subjt:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN

Query:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAPIKGKEQAV
        KKYYID+VET+PSNAISIIETDCEV FAPPLDYKEPEKPVAP KGKEQAV
Subjt:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAPIKGKEQAV

XP_022969438.1 ubiquitin recognition factor in ER-associated degradation protein 1-like isoform X2 [Cucurbita maxima]6.4e-3356.67Show/hide
Query:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN
        MLFEFRNDA ERVSHCGVLEF+                                                        ETTL NFSCLTTGDS MVAY N
Subjt:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN

Query:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAPIKGKEQAV
        KKYYID+VET+PSNAISIIETDCEV FAPPLDYKEPEKPVAP KGKEQAV
Subjt:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAPIKGKEQAV

XP_022975346.1 ubiquitin recognition factor in ER-associated degradation protein 1-like isoform X1 [Cucurbita maxima]6.4e-3356.67Show/hide
Query:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN
        MLFEFRNDA ERVSHCGVLEF+                                                        ETTL NFSCLTTGDS MVAY N
Subjt:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN

Query:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAPIKGKEQAV
        KKYYID+VET+PSNAISIIETDCEV FAPPLDYKEPEKPVAP KGKEQAV
Subjt:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAPIKGKEQAV

XP_022975347.1 ubiquitin recognition factor in ER-associated degradation protein 1-like isoform X2 [Cucurbita maxima]6.4e-3356.67Show/hide
Query:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN
        MLFEFRNDA ERVSHCGVLEF+                                                        ETTL NFSCLTTGDS MVAY N
Subjt:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN

Query:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAPIKGKEQAV
        KKYYID+VET+PSNAISIIETDCEV FAPPLDYKEPEKPVAP KGKEQAV
Subjt:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAPIKGKEQAV

XP_022975348.1 ubiquitin recognition factor in ER-associated degradation protein 1-like isoform X3 [Cucurbita maxima]6.4e-3356.67Show/hide
Query:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN
        MLFEFRNDA ERVSHCGVLEF+                                                        ETTL NFSCLTTGDS MVAY N
Subjt:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN

Query:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAPIKGKEQAV
        KKYYID+VET+PSNAISIIETDCEV FAPPLDYKEPEKPVAP KGKEQAV
Subjt:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAPIKGKEQAV

TrEMBL top hitse value%identityAlignment
A0A6J1HWC8 ubiquitin recognition factor in ER-associated degradation protein 1-like isoform X13.1e-3356.67Show/hide
Query:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN
        MLFEFRNDA ERVSHCGVLEF+                                                        ETTL NFSCLTTGDS MVAY N
Subjt:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN

Query:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAPIKGKEQAV
        KKYYID+VET+PSNAISIIETDCEV FAPPLDYKEPEKPVAP KGKEQAV
Subjt:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAPIKGKEQAV

A0A6J1I0Z2 ubiquitin recognition factor in ER-associated degradation protein 1-like isoform X23.1e-3356.67Show/hide
Query:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN
        MLFEFRNDA ERVSHCGVLEF+                                                        ETTL NFSCLTTGDS MVAY N
Subjt:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN

Query:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAPIKGKEQAV
        KKYYID+VET+PSNAISIIETDCEV FAPPLDYKEPEKPVAP KGKEQAV
Subjt:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAPIKGKEQAV

A0A6J1ICT9 ubiquitin recognition factor in ER-associated degradation protein 1-like isoform X23.1e-3356.67Show/hide
Query:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN
        MLFEFRNDA ERVSHCGVLEF+                                                        ETTL NFSCLTTGDS MVAY N
Subjt:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN

Query:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAPIKGKEQAV
        KKYYID+VET+PSNAISIIETDCEV FAPPLDYKEPEKPVAP KGKEQAV
Subjt:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAPIKGKEQAV

A0A6J1IDX0 ubiquitin recognition factor in ER-associated degradation protein 1-like isoform X13.1e-3356.67Show/hide
Query:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN
        MLFEFRNDA ERVSHCGVLEF+                                                        ETTL NFSCLTTGDS MVAY N
Subjt:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN

Query:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAPIKGKEQAV
        KKYYID+VET+PSNAISIIETDCEV FAPPLDYKEPEKPVAP KGKEQAV
Subjt:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAPIKGKEQAV

A0A6J1IIY4 ubiquitin recognition factor in ER-associated degradation protein 1-like isoform X33.1e-3356.67Show/hide
Query:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN
        MLFEFRNDA ERVSHCGVLEF+                                                        ETTL NFSCLTTGDS MVAY N
Subjt:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN

Query:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAPIKGKEQAV
        KKYYID+VET+PSNAISIIETDCEV FAPPLDYKEPEKPVAP KGKEQAV
Subjt:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAPIKGKEQAV

SwissProt top hitse value%identityAlignment
P70362 Ubiquitin recognition factor in ER-associated degradation protein 12.9e-1232.86Show/hide
Query:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN
        MLF+  N  ++R++HCGVLEF+                                                        E  L NF+CLTTGD   + Y  
Subjt:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN

Query:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPV
        K Y + ++ETKP  A+SIIE D  V F  PL YKEPE+PV
Subjt:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPV

Q55BK0 Ubiquitin fusion degradation protein 1 homolog1.4e-1133.81Show/hide
Query:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN
        MLFE  N  + + SHCGVLEFI                                                        E +L  F+ LT  D  M+ Y N
Subjt:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN

Query:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKP
         KYY+ +VE KP+NAISIIE D  V FAPP+D KE   P
Subjt:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKP

Q92890 Ubiquitin recognition factor in ER-associated degradation protein 12.5e-1132.14Show/hide
Query:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN
        MLF+  N  ++R++HCGVLEF+                                                        E  L NF+CLTTGD   + Y  
Subjt:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN

Query:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPV
        K Y + ++ETKP  A+SIIE D  V F  PL YKEPE+ V
Subjt:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPV

Q9ES53 Ubiquitin recognition factor in ER-associated degradation protein 12.9e-1232.86Show/hide
Query:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN
        MLF+  N  ++R++HCGVLEF+                                                        E  L NF+CLTTGD   + Y  
Subjt:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN

Query:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPV
        K Y + ++ETKP  A+SIIE D  V F  PL YKEPE+PV
Subjt:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPV

Q9VTF9 Ubiquitin fusion degradation protein 1 homolog3.9e-0943.06Show/hide
Query:  IETTLGNFSCLTTGDSTMVAYYNKKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAPIKGKEQA
        +E  L NF+CLT GD   + Y  K Y + ++ETKP NA+SIIE D  V F  P+ YK+  +  A   G++ A
Subjt:  IETTLGNFSCLTTGDSTMVAYYNKKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAPIKGKEQA

Arabidopsis top hitse value%identityAlignment
AT2G21270.1 ubiquitin fusion degradation 13.9e-2846.75Show/hide
Query:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN
        MLFE RN   ERV+HCGVLEFI                                                        ET L N+SCLT+GDS MV Y N
Subjt:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN

Query:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAP--IKGKEQAVEI
        KKY+ID+VETKP+NAISIIETDCEV FAPPLDYKEPE+P AP   KG  +A E+
Subjt:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAP--IKGKEQAVEI

AT2G21270.2 ubiquitin fusion degradation 13.9e-2846.75Show/hide
Query:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN
        MLFE RN   ERV+HCGVLEFI                                                        ET L N+SCLT+GDS MV Y N
Subjt:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN

Query:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAP--IKGKEQAVEI
        KKY+ID+VETKP+NAISIIETDCEV FAPPLDYKEPE+P AP   KG  +A E+
Subjt:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAP--IKGKEQAVEI

AT2G21270.3 ubiquitin fusion degradation 13.9e-2846.75Show/hide
Query:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN
        MLFE RN   ERV+HCGVLEFI                                                        ET L N+SCLT+GDS MV Y N
Subjt:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN

Query:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAP--IKGKEQAVEI
        KKY+ID+VETKP+NAISIIETDCEV FAPPLDYKEPE+P AP   KG  +A E+
Subjt:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAP--IKGKEQAVEI

AT4G38930.1 Ubiquitin fusion degradation UFD1 family protein2.5e-2744.74Show/hide
Query:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN
        MLFE RN + +  SHCGVLEFI                                                        ET L N+SCLT GDS MV Y N
Subjt:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN

Query:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAPIKGKEQAVEI
        KKY+ID+VE KPSN ISIIETDCEV FAPPLDYKEPE+PVAP   K + V++
Subjt:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAPIKGKEQAVEI

AT4G38930.2 Ubiquitin fusion degradation UFD1 family protein5.6e-2745.45Show/hide
Query:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN
        MLFE RN + +  SHCGVLEFI                                                        ET L N+SCLT GDS MV Y N
Subjt:  MLFEFRNDAAERVSHCGVLEFI--------------------------------------------------------ETTLGNFSCLTTGDSTMVAYYN

Query:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPV--APIKGKEQAVEI
        KKY+ID+VE KPSN ISIIETDCEV FAPPLDYKEPE+PV  AP KG+ +A E+
Subjt:  KKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPV--APIKGKEQAVEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATTTGAGTTTCGAAACGATGCTGCTGAGCGAGTTTCTCATTGTGGGGTTTTGGAGTTTATTGAGACAACACTTGGGAATTTCTCCTGCCTCACCACTGGAGACAG
TACTATGGTGGCATATTACAACAAGAAATATTACATTGACATGGTCGAAACGAAGCCATCCAATGCAATAAGTATCATTGAGACAGATTGTGAGGTGGCTTTTGCACCTC
CTCTCGATTACAAGGAACCAGAGAAGCCTGTTGCACCAATCAAGGGGAAGGAGCAAGCGGTGGAGATTGGTTGTTGCGTCACAGTAATCGTCCGACACGATTGGATTGCC
CAAAGGATTGAGTGCTGCAGCTTCATAGATGAATCAGTTTGTAGGAAACACTCAGCTCTTAGTGTTGTGAACTTTGGCCGAATTCTTGAAGGGAAGAAGAGTAAGGTGAA
AGAAGGCATTGACGATGACGATGACCATGAGGAATTGGCAGAAGAATTCGATGTTAAAATCATGATTGATCGTCTTGATTTGGTATATTTGGTAAACAACTTTCAACAAG
CTCAAGATTGTTCCATGCAGGCAAGCATTGGAGCTCAATTGGAGTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTATTTGAGTTTCGAAACGATGCTGCTGAGCGAGTTTCTCATTGTGGGGTTTTGGAGTTTATTGAGACAACACTTGGGAATTTCTCCTGCCTCACCACTGGAGACAG
TACTATGGTGGCATATTACAACAAGAAATATTACATTGACATGGTCGAAACGAAGCCATCCAATGCAATAAGTATCATTGAGACAGATTGTGAGGTGGCTTTTGCACCTC
CTCTCGATTACAAGGAACCAGAGAAGCCTGTTGCACCAATCAAGGGGAAGGAGCAAGCGGTGGAGATTGGTTGTTGCGTCACAGTAATCGTCCGACACGATTGGATTGCC
CAAAGGATTGAGTGCTGCAGCTTCATAGATGAATCAGTTTGTAGGAAACACTCAGCTCTTAGTGTTGTGAACTTTGGCCGAATTCTTGAAGGGAAGAAGAGTAAGGTGAA
AGAAGGCATTGACGATGACGATGACCATGAGGAATTGGCAGAAGAATTCGATGTTAAAATCATGATTGATCGTCTTGATTTGGTATATTTGGTAAACAACTTTCAACAAG
CTCAAGATTGTTCCATGCAGGCAAGCATTGGAGCTCAATTGGAGTGTTAG
Protein sequenceShow/hide protein sequence
MLFEFRNDAAERVSHCGVLEFIETTLGNFSCLTTGDSTMVAYYNKKYYIDMVETKPSNAISIIETDCEVAFAPPLDYKEPEKPVAPIKGKEQAVEIGCCVTVIVRHDWIA
QRIECCSFIDESVCRKHSALSVVNFGRILEGKKSKVKEGIDDDDDHEELAEEFDVKIMIDRLDLVYLVNNFQQAQDCSMQASIGAQLEC