; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg013938 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg013938
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
Genome locationscaffold3:39883855..39887287
RNA-Seq ExpressionSpg013938
SyntenySpg013938
Gene Ontology termsGO:0045039 - protein insertion into mitochondrial inner membrane (biological process)
GO:0071806 - protein transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0042721 - TIM22 mitochondrial import inner membrane insertion complex (cellular component)
GO:0008320 - protein transmembrane transporter activity (molecular function)
GO:0030943 - mitochondrion targeting sequence binding (molecular function)
InterPro domainsIPR039175 - Mitochondrial import inner membrane translocase subunit TIM22


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593015.1 hypothetical protein SDJN03_12491, partial [Cucurbita argyrosperma subsp. sororia]3.0e-9187Show/hide
Query:  MDSEGPKALDSDTP-----SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSA
        MDS GPK LDSDTP     SSSSSSNYGDWKERI FPT+LAGF+GGGAGLVSK+R VHGLANISATYATNLSIVA CYCGAREFVRVSRRSEPDDLMNSA
Subjt:  MDSEGPKALDSDTP-----SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSA

Query:  IAGFGTGALLGRLQGGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKKDP
        IAGFGTGALLGRLQGG+LG++RYS++FTVAGTA+DYATLKLKP FRSYKE+I  ESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQR LGQ+N+KDP
Subjt:  IAGFGTGALLGRLQGGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKKDP

XP_008458054.1 PREDICTED: uncharacterized protein LOC103497594 [Cucumis melo]3.1e-8887.24Show/hide
Query:  MDSEGPKALDSDTP-SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAIAGF
        MDS  PK  +SDTP SSS+SS+YG WKERIF+PTLLAG VGGGAGL+SKYR +HGLANISATYATNLSIVA CYCGAREFVRVSRRSEPDDLMNSAIAGF
Subjt:  MDSEGPKALDSDTP-SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAIAGF

Query:  GTGALLGRLQGGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKKDP
        GTGALLGRLQGGQLG++RYSLIFT+ GT VDYATLKLKP  RSYKESI   SSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKKDP
Subjt:  GTGALLGRLQGGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKKDP

XP_022157212.1 uncharacterized protein LOC111023975 [Momordica charantia]4.7e-8985.43Show/hide
Query:  MDSEGPKALDSDTP----SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAI
        MDSE PK LDS+TP    SSSSSSNYGDWK+RIFFPTLLAGFVGGGAGLVSKYR VHGLANISATYA NLSIV  CYCGAREFVRV R+SEPDDLMNSAI
Subjt:  MDSEGPKALDSDTP----SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAI

Query:  AGFGTGALLGRLQGGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKKDP
        AGFGTGA+LGRLQGGQLG++RYSL+FTV GT  DYATLKL+P FRSYKES+F ES +WMKLPEWSPIQVLDEEALAAKQAREQQLYAQR LGQLNKK+P
Subjt:  AGFGTGALLGRLQGGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKKDP

XP_022960027.1 uncharacterized protein LOC111460899 [Cucurbita moschata]6.6e-9186.63Show/hide
Query:  MDSEGPKALDSDTP-------SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMN
        MDS GPK LDSDTP       S SSSSNYGDWKERI FPT+LAGFVGGGAGLVSK+R VHGLANISATYATNLSIVA CYCGAREFVRVSRRSEPDDLMN
Subjt:  MDSEGPKALDSDTP-------SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMN

Query:  SAIAGFGTGALLGRLQGGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKK
        SAIAGFGTGALLGRLQGG+LG++RYS++FTVAGTA+DYATLKLKP FRSYKE+I  ESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQR LGQ+NKK
Subjt:  SAIAGFGTGALLGRLQGGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKK

Query:  DP
        DP
Subjt:  DP

XP_038896923.1 uncharacterized protein LOC120085132 [Benincasa hispida]8.9e-9692.96Show/hide
Query:  MDSEGPKALDSDT----PSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAI
        MDS GPKALDSDT    PSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYR VHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAI
Subjt:  MDSEGPKALDSDT----PSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAI

Query:  AGFGTGALLGRLQGGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKKDP
        AGFGTGALLGRLQGGQLG++RYSLIFTV GT VDYATLKLKP  RSYKESIF ESSSWMKLPEWSPI+VLDEEALAAKQAREQQLYAQRALGQLNKKDP
Subjt:  AGFGTGALLGRLQGGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKKDP

TrEMBL top hitse value%identityAlignment
A0A0A0K6T5 Uncharacterized protein9.6e-8886.29Show/hide
Query:  MDSEGPKALDSDTP--SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAIAG
        MDS  PK  +SDTP  SSS+SS+YG WKERIF+PTLLAG VGGGAGL+SKYR VHGLANISATYATNLSIVA CYCGAREFVRVSRRSEPDDLMNSAIAG
Subjt:  MDSEGPKALDSDTP--SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAIAG

Query:  FGTGALLGRLQGGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKKDP
        FGTGALLGRLQGG+LG++RYSL+FT+ GT VDYATLKLKP  RSYKESI   SSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKKDP
Subjt:  FGTGALLGRLQGGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKKDP

A0A1S3C726 uncharacterized protein LOC1034975941.5e-8887.24Show/hide
Query:  MDSEGPKALDSDTP-SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAIAGF
        MDS  PK  +SDTP SSS+SS+YG WKERIF+PTLLAG VGGGAGL+SKYR +HGLANISATYATNLSIVA CYCGAREFVRVSRRSEPDDLMNSAIAGF
Subjt:  MDSEGPKALDSDTP-SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAIAGF

Query:  GTGALLGRLQGGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKKDP
        GTGALLGRLQGGQLG++RYSLIFT+ GT VDYATLKLKP  RSYKESI   SSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKKDP
Subjt:  GTGALLGRLQGGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKKDP

A0A5A7SIX7 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein1.5e-8887.24Show/hide
Query:  MDSEGPKALDSDTP-SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAIAGF
        MDS  PK  +SDTP SSS+SS+YG WKERIF+PTLLAG VGGGAGL+SKYR +HGLANISATYATNLSIVA CYCGAREFVRVSRRSEPDDLMNSAIAGF
Subjt:  MDSEGPKALDSDTP-SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAIAGF

Query:  GTGALLGRLQGGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKKDP
        GTGALLGRLQGGQLG++RYSLIFT+ GT VDYATLKLKP  RSYKESI   SSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKKDP
Subjt:  GTGALLGRLQGGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKKDP

A0A6J1DTZ3 uncharacterized protein LOC1110239752.3e-8985.43Show/hide
Query:  MDSEGPKALDSDTP----SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAI
        MDSE PK LDS+TP    SSSSSSNYGDWK+RIFFPTLLAGFVGGGAGLVSKYR VHGLANISATYA NLSIV  CYCGAREFVRV R+SEPDDLMNSAI
Subjt:  MDSEGPKALDSDTP----SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAI

Query:  AGFGTGALLGRLQGGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKKDP
        AGFGTGA+LGRLQGGQLG++RYSL+FTV GT  DYATLKL+P FRSYKES+F ES +WMKLPEWSPIQVLDEEALAAKQAREQQLYAQR LGQLNKK+P
Subjt:  AGFGTGALLGRLQGGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKKDP

A0A6J1H677 uncharacterized protein LOC1114608993.2e-9186.63Show/hide
Query:  MDSEGPKALDSDTP-------SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMN
        MDS GPK LDSDTP       S SSSSNYGDWKERI FPT+LAGFVGGGAGLVSK+R VHGLANISATYATNLSIVA CYCGAREFVRVSRRSEPDDLMN
Subjt:  MDSEGPKALDSDTP-------SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMN

Query:  SAIAGFGTGALLGRLQGGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKK
        SAIAGFGTGALLGRLQGG+LG++RYS++FTVAGTA+DYATLKLKP FRSYKE+I  ESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQR LGQ+NKK
Subjt:  SAIAGFGTGALLGRLQGGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKK

Query:  DP
        DP
Subjt:  DP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G25120.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein2.7e-5057.75Show/hide
Query:  KALDSDTPSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLG
        +AL   TP    +   G   +R+   +LLAG +GGGAGLVSK+R  H   NI   YA N +IVAGCYCGARE VR++RRSE DDLMNSAI G  +GALLG
Subjt:  KALDSDTPSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLG

Query:  RLQGGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKK
        RLQGG  GAIRYSL+F   GTA DYATLK KP   SY+      +    KLPEWSPI+VLDEEALA K+A E++++ +R LG+LNK+
Subjt:  RLQGGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCAGAGGGTCCAAAAGCCCTAGATTCAGACACTCCTTCTTCATCATCTTCTTCTAACTATGGCGATTGGAAGGAACGTATCTTTTTTCCCACTCTTCTCGCAGG
ATTTGTTGGGGGAGGAGCTGGGCTAGTGTCCAAGTATCGGAATGTTCATGGCCTCGCGAACATTTCTGCCACTTATGCTACCAATTTATCCATTGTTGCTGGTTGCTACT
GCGGAGCACGTGAGTTCGTCAGAGTTTCTCGAAGGTCAGAACCTGATGACCTTATGAACTCTGCAATAGCAGGGTTTGGAACCGGAGCTCTTCTTGGACGCCTTCAAGGT
GGTCAGCTCGGCGCTATTCGATACTCGTTGATCTTCACCGTTGCCGGGACAGCAGTAGATTATGCCACACTGAAACTAAAACCTGCTTTCAGAAGCTACAAAGAATCGAT
ATTTGGAGAAAGTAGTAGCTGGATGAAATTACCAGAATGGTCCCCCATCCAAGTACTTGATGAGGAGGCTTTAGCTGCCAAACAAGCTCGGGAGCAACAGCTCTACGCAC
AGAGGGCACTTGGGCAATTAAACAAAAAGGATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCAGAGGGTCCAAAAGCCCTAGATTCAGACACTCCTTCTTCATCATCTTCTTCTAACTATGGCGATTGGAAGGAACGTATCTTTTTTCCCACTCTTCTCGCAGG
ATTTGTTGGGGGAGGAGCTGGGCTAGTGTCCAAGTATCGGAATGTTCATGGCCTCGCGAACATTTCTGCCACTTATGCTACCAATTTATCCATTGTTGCTGGTTGCTACT
GCGGAGCACGTGAGTTCGTCAGAGTTTCTCGAAGGTCAGAACCTGATGACCTTATGAACTCTGCAATAGCAGGGTTTGGAACCGGAGCTCTTCTTGGACGCCTTCAAGGT
GGTCAGCTCGGCGCTATTCGATACTCGTTGATCTTCACCGTTGCCGGGACAGCAGTAGATTATGCCACACTGAAACTAAAACCTGCTTTCAGAAGCTACAAAGAATCGAT
ATTTGGAGAAAGTAGTAGCTGGATGAAATTACCAGAATGGTCCCCCATCCAAGTACTTGATGAGGAGGCTTTAGCTGCCAAACAAGCTCGGGAGCAACAGCTCTACGCAC
AGAGGGCACTTGGGCAATTAAACAAAAAGGATCCTTGA
Protein sequenceShow/hide protein sequence
MDSEGPKALDSDTPSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQG
GQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKKDP