CuGenDBv2

Gene ID	Spg013948
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	photosynthetic NDH subunit of subcomplex B 1, chloroplastic
Genome location	scaffold3:47076134..47079551
RNA-Seq Expression	Spg013948
Synteny	Spg013948
Gene Ontology terms	GO:0009773 - photosynthetic electron transport in photosystem I (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0010598 - NAD(P)H dehydrogenase complex (plastoquinone) (cellular component) GO:0016757 - transferase activity, transferring glycosyl groups (molecular function)
InterPro domains	IPR044983 - Photosynthetic NDH subunit of subcomplex B 1, chloroplastic

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6575629.1 Photosynthetic NDH subunit of subcomplex B 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

2.7e-247

92.78

Show/hide

Query:  MATSSLPTKSLPPFLPTSSSPPSSPSTHFTKPLFLAPPDISLCT-SSSPSKLLIAS-SKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLP SS PPSSPSTHFTKP FLAPPDISL T SSSPSKL I S +KKNPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPTSSSPPSSPSTHFTKPLFLAPPDISLCT-SSSPSKLLIAS-SKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEVASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL
        GFLKFPQGYMVEVASLGLK+RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPA+YTDMVGLL
Subjt:  GFLKFPQGYMVEVASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL

Query:  KGRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPSLKVSISRKLKEVV
        KGRYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPR PVP LKVSISRKLKE+V
Subjt:  KGRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPSLKVSISRKLKEVV

Query:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANVIRGFKPVFVIPHVKERENVEDEVGDDASIVFITTPGQLAALINDSAGLIAT
        +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIAN IRGFKPVFVIPH KERENVE+EVGD+ASIVFITTPGQLAALINDSAG+IAT
Subjt:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANVIRGFKPVFVIPHVKERENVEDEVGDDASIVFITTPGQLAALINDSAGLIAT

Query:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDISKVKKAIQSLEVPLALAFQ
        NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCI VSS TGRLIDID+  VK+AIQS EVPLALAFQ
Subjt:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDISKVKKAIQSLEVPLALAFQ

XP_022145001.1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Momordica charantia]

7.1e-248

92.96

Show/hide

Query:  MATSSLPTKSLPPFLPTSSSPPSSPSTHFTKPLFLAPPDIS-LCTSSSPSKLLIASSKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG
        MATSSLPTKSLPPFLP+S+SPPSSPSTHFTKPLFLAPPDIS L T+ SP K  I ++KKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG
Subjt:  MATSSLPTKSLPPFLPTSSSPPSSPSTHFTKPLFLAPPDIS-LCTSSSPSKLLIASSKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG

Query:  FLKFPQGYMVEVASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
        FLKFPQGYMVE+ASLGLK+RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
Subjt:  FLKFPQGYMVEVASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK

Query:  GRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPSLKVSISRKLKEVVE
         RYYDMVLSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPR PVP LKV ISRKLKEVVE
Subjt:  GRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPSLKVSISRKLKEVVE

Query:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANVIRGFKPVFVIPHVKERENVEDEVGDDASIVFITTPGQLAALINDSAGLIATN
        EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ IRGFKPVFVIPH KERENVE+EVGDDA I+FITTPGQLAALINDSAGLIATN
Subjt:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANVIRGFKPVFVIPHVKERENVEDEVGDDASIVFITTPGQLAALINDSAGLIATN

Query:  TAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDISKVKKAIQSLEVPLALAF
        TAAIQLAIAREKPSIALF S+EKAKLFVPDAE+KRCITVSSATGRLIDID+  VK+AIQS EVPLALAF
Subjt:  TAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDISKVKKAIQSLEVPLALAF

XP_022953552.1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita moschata]

2.1e-247

92.78

Show/hide

Query:  MATSSLPTKSLPPFLPTSSSPPSSPSTHFTKPLFLAPPDISLCT-SSSPSKLLIAS-SKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLP SS PPSSPSTHFTKP FLAPPDISL T SSSPSKL I S +KKNPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPTSSSPPSSPSTHFTKPLFLAPPDISLCT-SSSPSKLLIAS-SKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEVASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL
        GFLKFPQGYMVEVASLGLK+RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPA+YTDMVGLL
Subjt:  GFLKFPQGYMVEVASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL

Query:  KGRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPSLKVSISRKLKEVV
        KGRYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPR PVP LKVSISRKLKE+V
Subjt:  KGRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPSLKVSISRKLKEVV

Query:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANVIRGFKPVFVIPHVKERENVEDEVGDDASIVFITTPGQLAALINDSAGLIAT
        +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIAN IRGFKPVFVIPH KERENVE+EVGD+ASIVFITTPGQLAALINDSAG+IAT
Subjt:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANVIRGFKPVFVIPHVKERENVEDEVGDDASIVFITTPGQLAALINDSAGLIAT

Query:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDISKVKKAIQSLEVPLALAFQ
        NTAAIQLAIAREKPSIALFCSEEKAKLFVPD+EAKRCI VSSATGRLIDID+  VK+AIQS EVPLALAFQ
Subjt:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDISKVKKAIQSLEVPLALAFQ

XP_022992479.1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita maxima]

3.0e-246

92.14

Show/hide

Query:  MATSSLPTKSLPPFLPTSSSPPSSPSTHFTKPLFLAPPDISLCT-SSSPSKLLIAS-SKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLP SS PPSSPSTHFTKP FLAPPDISL T SSSPSKL I S +KKNPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPTSSSPPSSPSTHFTKPLFLAPPDISLCT-SSSPSKLLIAS-SKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEVASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL
        GFLKFPQGYMVE+ASLGLK+RGDVRRCCCVISGGVYENLLFFP IQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPA+YTDMVGLL
Subjt:  GFLKFPQGYMVEVASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL

Query:  KGRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPSLKVSISRKLKEVV
        KGRYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKP+SSNLSEGGFNMYHQM DWLGRPFRSVPR PVP LKVSISRKLKE+V
Subjt:  KGRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPSLKVSISRKLKEVV

Query:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANVIRGFKPVFVIPHVKERENVEDEVGDDASIVFITTPGQLAALINDSAGLIAT
        +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIAN IRGFKPVFVIPH KERENVE+EVGD+ASIVFITTPGQLAALINDSAG+IAT
Subjt:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANVIRGFKPVFVIPHVKERENVEDEVGDDASIVFITTPGQLAALINDSAGLIAT

Query:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDISKVKKAIQSLEVPLALAFQ
        NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCI VSSATGRLIDID+  VK+AIQS EVPLALAFQ
Subjt:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDISKVKKAIQSLEVPLALAFQ

XP_038896546.1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Benincasa hispida]

6.8e-251

94.26

Show/hide

Query:  MATSSLPTKSLPPFLPTSSSPPSSPSTHFTKPLFLAPPDISLCT-SSSPSKLLIASSKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG
        MATSSLPTKSLPPF PTSS  PSSPSTHFTKPLFLAPPDISL T SSS SKLLI SSKKN W DPFDDGDDP+MEYGSLFADGKQEEDPRPPDNPNNPYG
Subjt:  MATSSLPTKSLPPFLPTSSSPPSSPSTHFTKPLFLAPPDISLCT-SSSPSKLLIASSKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG

Query:  FLKFPQGYMVEVASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
        FLKFPQGYMVE+ASLGLK+RGDVRRCCCV+SGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
Subjt:  FLKFPQGYMVEVASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK

Query:  GRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPSLKVSISRKLKEVVE
        GRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPR PVP LKVSISRKLKEVV 
Subjt:  GRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPSLKVSISRKLKEVVE

Query:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANVIRGFKPVFVIPHVKERENVEDEVGDDASIVFITTPGQLAALINDSAGLIATN
        EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIAN +RGFKPVFVIPH KERENVE+EVGDDASIVFITTPGQLAALINDSAG+IATN
Subjt:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANVIRGFKPVFVIPHVKERENVEDEVGDDASIVFITTPGQLAALINDSAGLIATN

Query:  TAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDISKVKKAIQSLEVPLALAFQ
        TAA+QLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRL DID+  VKKAIQS EVPLALAFQ
Subjt:  TAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDISKVKKAIQSLEVPLALAFQ

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CEK1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic

7.9e-245

91.68

Show/hide

Query:  MATSSLPTKSLPPFLPTSSSPPSSPSTHFTKPLFLAPPDISLCTSSSPSKLLIASSKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGF
        MATSSLPTKSLPPFLPTSS PPSSPSTHFTKPLFL+P  ISL TS   SKL I  SKKNPWFDPFDDG+DP+MEYGSLF+DGKQEEDPRPPDNPNNPYGF
Subjt:  MATSSLPTKSLPPFLPTSSSPPSSPSTHFTKPLFLAPPDISLCTSSSPSKLLIASSKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGF

Query:  LKFPQGYMVEVASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKG
        LKFPQGYMVE+ASLGLK+RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVG+LKG
Subjt:  LKFPQGYMVEVASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKG

Query:  RYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPSLKVSISRKLKEVVEE
        RYYDMVLSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKP+SSNLSEGGFNMYHQMVDWLGRPFRSVPR PVP LKVSI+RKLKEV+ E
Subjt:  RYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPSLKVSISRKLKEVVEE

Query:  KYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANVIRGFKPVFVIPHVKERENVEDEVGDDASIVFITTPGQLAALINDSAGLIATNT
        KYKKAG EKGKYIVIHGIESDSKASMQSKGDTDSLLPI+AWAEIAN IRGFKPVFVIP  KERENVE+EVG++ASIVFITTPGQLAALINDSAGLIATNT
Subjt:  KYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANVIRGFKPVFVIPHVKERENVEDEVGDDASIVFITTPGQLAALINDSAGLIATNT

Query:  AAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDISKVKKAIQSLEVPLALAFQ
        AA+QLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSS TGRLIDID+  +KKAIQS EVPLALAFQ
Subjt:  AAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDISKVKKAIQSLEVPLALAFQ

A0A5A7UYW0 Photosynthetic NDH subunit of subcomplex B 1

9.3e-246

91.9

Show/hide

Query:  MATSSLPTKSLPPFLPTSSSPPSSPSTHFTKPLFLAPPDISLCTSSSPSKLLIASSKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGF
        MATSSLPTKSLPPFLPTSS PPSSPSTHFTKPLFL+P  ISL TS   SKL I  SKKNPWFDPFDDG+DP+MEYGSLF+DGKQEEDPRPPDNPNNPYGF
Subjt:  MATSSLPTKSLPPFLPTSSSPPSSPSTHFTKPLFLAPPDISLCTSSSPSKLLIASSKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGF

Query:  LKFPQGYMVEVASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKG
        LKFPQGYMVE+ASLGLK+RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVG+LKG
Subjt:  LKFPQGYMVEVASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKG

Query:  RYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPSLKVSISRKLKEVVEE
        RYYDMVLSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKP+SSNLSEGGFNMYHQMVDWLGRPFRSVPR PVP LKVSI+RKLKEV+ E
Subjt:  RYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPSLKVSISRKLKEVVEE

Query:  KYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANVIRGFKPVFVIPHVKERENVEDEVGDDASIVFITTPGQLAALINDSAGLIATNT
        KYKKAG EKGKYIVIHGIESDSKASMQSKGDTDSLLPI+AWAEIAN IRGFKPVFVIPH KERENVE+EVG++ASIVFITTPGQLAALINDSAGLIATNT
Subjt:  KYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANVIRGFKPVFVIPHVKERENVEDEVGDDASIVFITTPGQLAALINDSAGLIATNT

Query:  AAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDISKVKKAIQSLEVPLALAFQ
        AA+QLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSS TGRLIDID+  +KKAIQS EVPLALAFQ
Subjt:  AAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDISKVKKAIQSLEVPLALAFQ

A0A6J1CV27 photosynthetic NDH subunit of subcomplex B 1, chloroplastic

3.4e-248

92.96

Show/hide

Query:  MATSSLPTKSLPPFLPTSSSPPSSPSTHFTKPLFLAPPDIS-LCTSSSPSKLLIASSKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG
        MATSSLPTKSLPPFLP+S+SPPSSPSTHFTKPLFLAPPDIS L T+ SP K  I ++KKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG
Subjt:  MATSSLPTKSLPPFLPTSSSPPSSPSTHFTKPLFLAPPDIS-LCTSSSPSKLLIASSKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG

Query:  FLKFPQGYMVEVASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
        FLKFPQGYMVE+ASLGLK+RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
Subjt:  FLKFPQGYMVEVASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK

Query:  GRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPSLKVSISRKLKEVVE
         RYYDMVLSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPR PVP LKV ISRKLKEVVE
Subjt:  GRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPSLKVSISRKLKEVVE

Query:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANVIRGFKPVFVIPHVKERENVEDEVGDDASIVFITTPGQLAALINDSAGLIATN
        EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ IRGFKPVFVIPH KERENVE+EVGDDA I+FITTPGQLAALINDSAGLIATN
Subjt:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANVIRGFKPVFVIPHVKERENVEDEVGDDASIVFITTPGQLAALINDSAGLIATN

Query:  TAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDISKVKKAIQSLEVPLALAF
        TAAIQLAIAREKPSIALF S+EKAKLFVPDAE+KRCITVSSATGRLIDID+  VK+AIQS EVPLALAF
Subjt:  TAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDISKVKKAIQSLEVPLALAF

A0A6J1GNJ2 photosynthetic NDH subunit of subcomplex B 1, chloroplastic

9.9e-248

92.78

Show/hide

Query:  MATSSLPTKSLPPFLPTSSSPPSSPSTHFTKPLFLAPPDISLCT-SSSPSKLLIAS-SKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLP SS PPSSPSTHFTKP FLAPPDISL T SSSPSKL I S +KKNPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPTSSSPPSSPSTHFTKPLFLAPPDISLCT-SSSPSKLLIAS-SKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEVASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL
        GFLKFPQGYMVEVASLGLK+RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPA+YTDMVGLL
Subjt:  GFLKFPQGYMVEVASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL

Query:  KGRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPSLKVSISRKLKEVV
        KGRYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPR PVP LKVSISRKLKE+V
Subjt:  KGRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPSLKVSISRKLKEVV

Query:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANVIRGFKPVFVIPHVKERENVEDEVGDDASIVFITTPGQLAALINDSAGLIAT
        +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIAN IRGFKPVFVIPH KERENVE+EVGD+ASIVFITTPGQLAALINDSAG+IAT
Subjt:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANVIRGFKPVFVIPHVKERENVEDEVGDDASIVFITTPGQLAALINDSAGLIAT

Query:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDISKVKKAIQSLEVPLALAFQ
        NTAAIQLAIAREKPSIALFCSEEKAKLFVPD+EAKRCI VSSATGRLIDID+  VK+AIQS EVPLALAFQ
Subjt:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDISKVKKAIQSLEVPLALAFQ

A0A6J1JXN2 photosynthetic NDH subunit of subcomplex B 1, chloroplastic

1.4e-246

92.14

Show/hide

Query:  MATSSLPTKSLPPFLPTSSSPPSSPSTHFTKPLFLAPPDISLCT-SSSPSKLLIAS-SKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLP SS PPSSPSTHFTKP FLAPPDISL T SSSPSKL I S +KKNPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPTSSSPPSSPSTHFTKPLFLAPPDISLCT-SSSPSKLLIAS-SKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEVASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL
        GFLKFPQGYMVE+ASLGLK+RGDVRRCCCVISGGVYENLLFFP IQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPA+YTDMVGLL
Subjt:  GFLKFPQGYMVEVASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL

Query:  KGRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPSLKVSISRKLKEVV
        KGRYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKP+SSNLSEGGFNMYHQM DWLGRPFRSVPR PVP LKVSISRKLKE+V
Subjt:  KGRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPSLKVSISRKLKEVV

Query:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANVIRGFKPVFVIPHVKERENVEDEVGDDASIVFITTPGQLAALINDSAGLIAT
        +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIAN IRGFKPVFVIPH KERENVE+EVGD+ASIVFITTPGQLAALINDSAG+IAT
Subjt:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANVIRGFKPVFVIPHVKERENVEDEVGDDASIVFITTPGQLAALINDSAGLIAT

Query:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDISKVKKAIQSLEVPLALAFQ
        NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCI VSSATGRLIDID+  VK+AIQS EVPLALAFQ
Subjt:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDISKVKKAIQSLEVPLALAFQ

SwissProt top hits

e value

%identity

Alignment

Q9S9N6 Photosynthetic NDH subunit of subcomplex B 1, chloroplastic

1.2e-186

73.12

Show/hide

Query:  SSLPTKSLP-PFLPTSSSPPSSPSTHFTKPLFLAPPDISLCTSSSPSKLLIASSKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLK
        SSLP   LP P  P   +PP S S    KPL        L TS S    +    K NPW DPFD G+DPD EYGSLFADGKQ+EDPRPPDNP+NPYGFLK
Subjt:  SSLPTKSLP-PFLPTSSSPPSSPSTHFTKPLFLAPPDISLCTSSSPSKLLIASSKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLK

Query:  FPQGYMVEVASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRY
        FP+GY VE+ASL LK+RGDVRRCCCVISGGVYENLLFFP IQL+KDRYPGVQ+D++ + RGKQTYELNKNVRW+NVYDPDD++PEPAEYTDM+GLLKGRY
Subjt:  FPQGYMVEVASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRY

Query:  YDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPSLKVSISRKLKEVVEEKY
        YDMVLSTKLAGLGHA FLFMTTARDRVSYIYP+VN+AGAGL LSETF  +++NLSE G++MY QM DWLGRPFRSVPR P+  L+VSISRK+KEVV  KY
Subjt:  YDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPSLKVSISRKLKEVVEEKY

Query:  KKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANVIRGFKPVFVIPHVKERENVEDEVGDDASIVFITTPGQLAALINDSAGLIATNTAA
        + AGA  GK+IVIHGIESDSKASMQSKGD DSLL ++ WA+I   +RGFKPVFVIPH KERENVED VGDD SIVFITTPGQLAALINDSAG+IATNTAA
Subjt:  KKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANVIRGFKPVFVIPHVKERENVEDEVGDDASIVFITTPGQLAALINDSAGLIATNTAA

Query:  IQLAIAREKPSIALFCSEEKAKLFVPDAEAK-RCITVSSATGRLIDIDISKVKKAIQSLEVPLAL
        IQLA AR+KP I LF SEEK KLFVP AE K  C+ ++S TG+L DIDI  VK A+Q  E  LAL
Subjt:  IQLAIAREKPSIALFCSEEKAKLFVPDAEAK-RCITVSSATGRLIDIDISKVKKAIQSLEVPLAL

Arabidopsis top hits

e value

%identity

Alignment

AT1G15980.1 NDH-dependent cyclic electron flow 1

8.7e-188

73.12

Show/hide

Query:  SSLPTKSLP-PFLPTSSSPPSSPSTHFTKPLFLAPPDISLCTSSSPSKLLIASSKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLK
        SSLP   LP P  P   +PP S S    KPL        L TS S    +    K NPW DPFD G+DPD EYGSLFADGKQ+EDPRPPDNP+NPYGFLK
Subjt:  SSLPTKSLP-PFLPTSSSPPSSPSTHFTKPLFLAPPDISLCTSSSPSKLLIASSKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLK

Query:  FPQGYMVEVASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRY
        FP+GY VE+ASL LK+RGDVRRCCCVISGGVYENLLFFP IQL+KDRYPGVQ+D++ + RGKQTYELNKNVRW+NVYDPDD++PEPAEYTDM+GLLKGRY
Subjt:  FPQGYMVEVASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRY

Query:  YDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPSLKVSISRKLKEVVEEKY
        YDMVLSTKLAGLGHA FLFMTTARDRVSYIYP+VN+AGAGL LSETF  +++NLSE G++MY QM DWLGRPFRSVPR P+  L+VSISRK+KEVV  KY
Subjt:  YDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPSLKVSISRKLKEVVEEKY

Query:  KKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANVIRGFKPVFVIPHVKERENVEDEVGDDASIVFITTPGQLAALINDSAGLIATNTAA
        + AGA  GK+IVIHGIESDSKASMQSKGD DSLL ++ WA+I   +RGFKPVFVIPH KERENVED VGDD SIVFITTPGQLAALINDSAG+IATNTAA
Subjt:  KKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANVIRGFKPVFVIPHVKERENVEDEVGDDASIVFITTPGQLAALINDSAGLIATNTAA

Query:  IQLAIAREKPSIALFCSEEKAKLFVPDAEAK-RCITVSSATGRLIDIDISKVKKAIQSLEVPLAL
        IQLA AR+KP I LF SEEK KLFVP AE K  C+ ++S TG+L DIDI  VK A+Q  E  LAL
Subjt:  IQLAIAREKPSIALFCSEEKAKLFVPDAEAK-RCITVSSATGRLIDIDISKVKKAIQSLEVPLAL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTACTTCTTCTCTACCCACCAAATCCCTCCCGCCATTTTTGCCGACCTCAAGCTCCCCACCTTCTTCTCCTTCAACCCACTTCACCAAGCCGCTCTTTCTAGCCCC
ACCGGACATTTCTCTCTGCACTTCCTCATCCCCCTCAAAACTTCTGATCGCCAGTTCCAAGAAGAATCCATGGTTCGACCCCTTCGACGACGGCGACGATCCGGACATGG
AATACGGCTCTCTCTTCGCCGACGGGAAGCAGGAAGAGGATCCTCGCCCACCGGACAATCCTAACAATCCGTATGGGTTCTTGAAATTTCCTCAGGGTTACATGGTGGAA
GTCGCTTCCCTCGGCCTGAAAGTCCGGGGAGATGTACGGCGGTGCTGCTGCGTGATCTCCGGCGGCGTCTATGAGAACCTCCTCTTCTTTCCGGCGATTCAATTGCTCAA
GGATCGGTACCCGGGTGTTCAAATCGATGTGGTGGCTTCGGCGAGGGGCAAACAGACTTACGAATTGAACAAGAATGTGAGATGGTCTAATGTCTATGATCCGGATGATT
ATTTTCCTGAACCAGCGGAGTATACTGACATGGTTGGATTGCTCAAGGGTAGGTACTATGACATGGTCTTGTCAACCAAGCTAGCAGGGCTTGGGCATGCAGTGTTTTTG
TTTATGACAACAGCCAGAGACAGAGTGAGCTACATTTACCCAGATGTGAATGCTGCTGGAGCAGGGCTTTTCTTGTCTGAAACATTTAAACCAGATAGCTCCAATCTTTC
TGAGGGAGGGTTCAACATGTATCATCAAATGGTTGATTGGTTAGGGAGGCCTTTTCGCAGCGTTCCCAGGCAGCCCGTTCCTTCGCTCAAAGTTTCGATTTCGAGAAAAT
TGAAGGAGGTTGTAGAGGAGAAGTATAAGAAAGCAGGTGCTGAGAAAGGAAAATATATTGTGATTCATGGGATAGAATCAGATTCAAAAGCCTCAATGCAGTCCAAAGGT
GATACAGATAGCTTGCTGCCCATTCAAGCCTGGGCTGAAATAGCCAATGTTATAAGGGGATTCAAACCAGTTTTTGTCATCCCACATGTAAAAGAAAGGGAAAATGTCGA
GGATGAGGTCGGAGATGATGCAAGCATCGTATTTATCACGACCCCAGGACAGCTAGCTGCTCTCATTAATGACTCAGCTGGTCTAATAGCTACCAACACTGCTGCTATCC
AACTCGCCATTGCTCGCGAAAAACCAAGCATCGCATTGTTTTGCTCTGAAGAGAAAGCAAAACTATTTGTTCCCGACGCAGAAGCAAAGAGATGCATCACAGTTTCGTCA
GCAACAGGACGACTAATCGACATCGATATCAGCAAGGTTAAAAAGGCAATACAGAGTCTTGAAGTGCCTCTAGCTCTTGCTTTTCAGTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MATSSLPTKSLPPFLPTSSSPPSSPSTHFTKPLFLAPPDISLCTSSSPSKLLIASSKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVE
VASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRYYDMVLSTKLAGLGHAVFL
FMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPSLKVSISRKLKEVVEEKYKKAGAEKGKYIVIHGIESDSKASMQSKG
DTDSLLPIQAWAEIANVIRGFKPVFVIPHVKERENVEDEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSS
ATGRLIDIDISKVKKAIQSLEVPLALAFQ

Spg013948 (gene) of Sponge gourd (cylindrica) v1 genome