; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg013949 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg013949
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMMS19 nucleotide excision repair protein
Genome locationscaffold3:48480322..48487091
RNA-Seq ExpressionSpg013949
SyntenySpg013949
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0016226 - iron-sulfur cluster assembly (biological process)
GO:0097428 - protein maturation by iron-sulfur cluster transfer (biological process)
GO:0005634 - nucleus (cellular component)
GO:0097361 - CIA complex (cellular component)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain
IPR029240 - MMS19, N-terminal
IPR039920 - DNA repair/transcription protein MET18/MMS19


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022992062.1 MMS19 nucleotide excision repair protein homolog isoform X1 [Cucurbita maxima]4.8e-7673.46Show/hide
Query:  EHFFGIFGILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLV
        +H     GILLLGE+LACLASKPLD A+IHSLM FF ERLADWKALRGAL+GCLALMRRK+ VGTVSQ DAKS AQSYFQNLQVQSLGQHDRKLSFELLV
Subjt:  EHFFGIFGILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLV

Query:  CLVENYPDAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEF
        CL+E+YPDAVVSL                                     DLVYGICEAIDGEKDP CLMLTFHIVELVAKLFPDPTGTLASSSSDLFEF
Subjt:  CLVENYPDAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEF

Query:  LGCYFPIHFTH
        LGCYFPIHFTH
Subjt:  LGCYFPIHFTH

XP_022992063.1 MMS19 nucleotide excision repair protein homolog isoform X2 [Cucurbita maxima]4.8e-7673.46Show/hide
Query:  EHFFGIFGILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLV
        +H     GILLLGE+LACLASKPLD A+IHSLM FF ERLADWKALRGAL+GCLALMRRK+ VGTVSQ DAKS AQSYFQNLQVQSLGQHDRKLSFELLV
Subjt:  EHFFGIFGILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLV

Query:  CLVENYPDAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEF
        CL+E+YPDAVVSL                                     DLVYGICEAIDGEKDP CLMLTFHIVELVAKLFPDPTGTLASSSSDLFEF
Subjt:  CLVENYPDAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEF

Query:  LGCYFPIHFTH
        LGCYFPIHFTH
Subjt:  LGCYFPIHFTH

XP_038898520.1 MMS19 nucleotide excision repair protein homolog isoform X1 [Benincasa hispida]5.6e-7776.47Show/hide
Query:  GILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLVCLVENYP
        GILLLGELLACLASKPLD A+IHSL+ FFTERLADWKALRGALVGCLALMRRK NVGT+SQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELL CL+E+YP
Subjt:  GILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLVCLVENYP

Query:  DAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEFLGCYFPI
        DAVVSL                                     DLVYGICEAIDGEKDP CLMLTFHIVELVAKLFPDP+GTLASSSSDLFEFLGCYFPI
Subjt:  DAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEFLGCYFPI

Query:  HFTH
        HFTH
Subjt:  HFTH

XP_038898520.1 MMS19 nucleotide excision repair protein homolog isoform X1 [Benincasa hispida]3.0e-0680.49Show/hide
Query:  QAASLEAITSLVKNDILTVETLVREMRMYLTTTDNIIRARG
        QA SLEAITSL KN++LT+ETLVREM MYLT TDNIIR RG
Subjt:  QAASLEAITSLVKNDILTVETLVREMRMYLTTTDNIIRARG

XP_038898520.1 MMS19 nucleotide excision repair protein homolog isoform X1 [Benincasa hispida]4.8e-7673.46Show/hide
Query:  EHFFGIFGILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLV
        +H     GILLLGE+L CLASKPLD A+IHSLM FFTERLADWKALRGAL+GCLALMRRK  VG VSQNDAKS AQSYFQNLQVQSLGQHDRKLSFELLV
Subjt:  EHFFGIFGILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLV

Query:  CLVENYPDAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEF
        CL+E+YPDAVVSL                                     DLVYGICEAIDGEKDP CLMLTFHIVELVAKLFPDPTGTLASSSSDLFEF
Subjt:  CLVENYPDAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEF

Query:  LGCYFPIHFTH
        LGCYFPIHFTH
Subjt:  LGCYFPIHFTH

XP_038898521.1 MMS19 nucleotide excision repair protein homolog isoform X2 [Benincasa hispida]5.6e-7776.47Show/hide
Query:  GILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLVCLVENYP
        GILLLGELLACLASKPLD A+IHSL+ FFTERLADWKALRGALVGCLALMRRK NVGT+SQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELL CL+E+YP
Subjt:  GILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLVCLVENYP

Query:  DAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEFLGCYFPI
        DAVVSL                                     DLVYGICEAIDGEKDP CLMLTFHIVELVAKLFPDP+GTLASSSSDLFEFLGCYFPI
Subjt:  DAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEFLGCYFPI

Query:  HFTH
        HFTH
Subjt:  HFTH

TrEMBL top hitse value%identityAlignment
A0A6J1GN60 MMS19 nucleotide excision repair protein2.3e-7673.46Show/hide
Query:  EHFFGIFGILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLV
        +H     GILLLGE+L CLASKPLD A+IHSLM FFTERLADWKALRGAL+GCLALMRRK  VG VSQNDAKS AQSYFQNLQVQSLGQHDRKLSFELLV
Subjt:  EHFFGIFGILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLV

Query:  CLVENYPDAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEF
        CL+E+YPDAVVSL                                     DLVYGICEAIDGEKDP CLMLTFHIVELVAKLFPDPTGTLASSSSDLFEF
Subjt:  CLVENYPDAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEF

Query:  LGCYFPIHFTH
        LGCYFPIHFTH
Subjt:  LGCYFPIHFTH

A0A6J1GPG0 MMS19 nucleotide excision repair protein2.3e-7673.46Show/hide
Query:  EHFFGIFGILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLV
        +H     GILLLGE+L CLASKPLD A+IHSLM FFTERLADWKALRGAL+GCLALMRRK  VG VSQNDAKS AQSYFQNLQVQSLGQHDRKLSFELLV
Subjt:  EHFFGIFGILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLV

Query:  CLVENYPDAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEF
        CL+E+YPDAVVSL                                     DLVYGICEAIDGEKDP CLMLTFHIVELVAKLFPDPTGTLASSSSDLFEF
Subjt:  CLVENYPDAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEF

Query:  LGCYFPIHFTH
        LGCYFPIHFTH
Subjt:  LGCYFPIHFTH

A0A6J1JNP3 MMS19 nucleotide excision repair protein2.3e-7673.46Show/hide
Query:  EHFFGIFGILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLV
        +H     GILLLGE+LACLASKPLD A+IHSLM FF ERLADWKALRGAL+GCLALMRRK+ VGTVSQ DAKS AQSYFQNLQVQSLGQHDRKLSFELLV
Subjt:  EHFFGIFGILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLV

Query:  CLVENYPDAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEF
        CL+E+YPDAVVSL                                     DLVYGICEAIDGEKDP CLMLTFHIVELVAKLFPDPTGTLASSSSDLFEF
Subjt:  CLVENYPDAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEF

Query:  LGCYFPIHFTH
        LGCYFPIHFTH
Subjt:  LGCYFPIHFTH

A0A6J1JWJ7 MMS19 nucleotide excision repair protein2.3e-7673.46Show/hide
Query:  EHFFGIFGILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLV
        +H     GILLLGE+LACLASKPLD A+IHSLM FF ERLADWKALRGAL+GCLALMRRK+ VGTVSQ DAKS AQSYFQNLQVQSLGQHDRKLSFELLV
Subjt:  EHFFGIFGILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLV

Query:  CLVENYPDAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEF
        CL+E+YPDAVVSL                                     DLVYGICEAIDGEKDP CLMLTFHIVELVAKLFPDPTGTLASSSSDLFEF
Subjt:  CLVENYPDAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEF

Query:  LGCYFPIHFTH
        LGCYFPIHFTH
Subjt:  LGCYFPIHFTH

A0A6J1JY03 MMS19 nucleotide excision repair protein2.3e-7673.46Show/hide
Query:  EHFFGIFGILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLV
        +H     GILLLGE+LACLASKPLD A+IHSLM FF ERLADWKALRGAL+GCLALMRRK+ VGTVSQ DAKS AQSYFQNLQVQSLGQHDRKLSFELLV
Subjt:  EHFFGIFGILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLV

Query:  CLVENYPDAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEF
        CL+E+YPDAVVSL                                     DLVYGICEAIDGEKDP CLMLTFHIVELVAKLFPDPTGTLASSSSDLFEF
Subjt:  CLVENYPDAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEF

Query:  LGCYFPIHFTH
        LGCYFPIHFTH
Subjt:  LGCYFPIHFTH

SwissProt top hitse value%identityAlignment
E1BP36 MMS19 nucleotide excision repair protein homolog7.5e-0828.29Show/hide
Query:  GILLLGELLACLASKPLDSASIHSLMVFFTERLADWK-ALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLVCLVENY
        GI LL ++L    S  L+   +H L++F+  RL D    +   L G  AL    L V T+    A SV ++ FQ + VQSL Q DR   + ++   +   
Subjt:  GILLLGELLACLASKPLDSASIHSLMVFFTERLADWK-ALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLVCLVENY

Query:  PDAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIV-ELVAKLFPDPTGTLASSSSDLFEFLGCYF
         + +  L                                     D  +G  + +DGEKDP+ L++ FHIV +L+++ +     +L     +LFE   CYF
Subjt:  PDAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIV-ELVAKLFPDPTGTLASSSSDLFEFLGCYF

Query:  PIHFT
        PI FT
Subjt:  PIHFT

Q0V9L1 MMS19 nucleotide excision repair protein homolog2.0e-0827.8Show/hide
Query:  GILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALR-GALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLVCLVENY
        G+ LL  +L    S+ L    +  L++F+  RL D   +    L G +AL         + Q  A SV +S FQ + VQSL Q DR   + ++   ++  
Subjt:  GILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALR-GALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLVCLVENY

Query:  PDAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIV-ELVAKLFPDPTGTLASSSSDLFEFLGCYF
         + + SL                                     D  YG  + +DGEKDP+ L++ FHIV +++ K +      L     +LFE   CYF
Subjt:  PDAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIV-ELVAKLFPDPTGTLASSSSDLFEFLGCYF

Query:  PIHFT
        PI FT
Subjt:  PIHFT

Q0WVF8 MMS19 nucleotide excision repair protein homolog9.4e-5148.34Show/hide
Query:  GILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLVCLVENYP
        GILLL E+L CL +KPL+   +H+L+ FF+E+LADW+A+ GALVGCLAL++RK   G V+  D +++A+S  QN+QVQ+L  H+RKL+FELL CL++ + 
Subjt:  GILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLVCLVENYP

Query:  DAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEFLGCYFPI
        +A++++                                   D+ LVY +CEAIDGEKDPQCLM+ FH+VEL+A LFP P+G LAS +SDLFE +GCYFP+
Subjt:  DAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEFLGCYFPI

Query:  HFTHVSSLHAS
        HFTH     A+
Subjt:  HFTHVSSLHAS

Q0WVF8 MMS19 nucleotide excision repair protein homolog2.7e-0563.41Show/hide
Query:  QAASLEAITSLVKNDILTVETLVREMRMYLTTTDNIIRARG
        Q  SL+AI S ++ND L++  LVREM MYLTTTDN++RARG
Subjt:  QAASLEAITSLVKNDILTVETLVREMRMYLTTTDNIIRARG

Q6DCF2 MMS19 nucleotide excision repair protein homolog2.6e-0829.27Show/hide
Query:  GILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALR-GALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLVCLVENY
        G+ LL  +L    S+ L    +  L+VF+  RL D   +    L G +AL         + Q  A SV +S FQ + VQSL Q DR   + ++       
Subjt:  GILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALR-GALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLVCLVENY

Query:  PDAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIV-ELVAKLFPDPTGTLASSSSDLFEFLGCYF
                                   MKT    +  L      D  YG  + +DGEKDP+ L++ F+IV ++V K +      L     +LFE   CYF
Subjt:  PDAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIV-ELVAKLFPDPTGTLASSSSDLFEFLGCYF

Query:  PIHFT
        PI FT
Subjt:  PIHFT

Q95U54 MMS19 nucleotide excision repair protein7.5e-0824.39Show/hide
Query:  IFGILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALV-GCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLVCLVE
        + G  LL  +L  L    L    +  L  F+ +RL D   +  A++ G  AL+  K     + +     + QS+F++   QS  + DR   F +   L E
Subjt:  IFGILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALV-GCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLVCLVE

Query:  NYPDAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEFLGCY
        N+ D + ++                                     D VYG+  +IDGE+DP+ L + F  +      +P     L   + ++FE   CY
Subjt:  NYPDAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEFLGCY

Query:  FPIHF
        FPI F
Subjt:  FPIHF

Arabidopsis top hitse value%identityAlignment
AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein6.1e-0531.58Show/hide
Query:  IWKGKSPKKVKIFLWSLAYRSLNTDDKLQKKFWRWTMS-PSGCRLCLRMEENVDHLFIQCEFAYQVWGWFARKVGL
        +W      K     W +A+  L+T D+L+     W +S P+ C LC   +E+  HLF +C F   VW +F  +  L
Subjt:  IWKGKSPKKVKIFLWSLAYRSLNTDDKLQKKFWRWTMS-PSGCRLCLRMEENVDHLFIQCEFAYQVWGWFARKVGL

AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.8e-0437.84Show/hide
Query:  IW-KGKSPKKVKIFLWSLAYRSLNTDDKLQKKFWRWTMSPSGCRLCLRMEENVDHLFIQCEFAYQVWGWFARKV
        IW KGK PK   I   ++ +R L+T D++    W +   P  C  C   +E   HLF  CEFA +VW +F  +V
Subjt:  IW-KGKSPKKVKIFLWSLAYRSLNTDDKLQKKFWRWTMSPSGCRLCLRMEENVDHLFIQCEFAYQVWGWFARKV

AT3G25270.1 Ribonuclease H-like superfamily protein6.5e-0739.39Show/hide
Query:  IWKGKSPKKVKIFLWSLAYRSLNTDDKLQKKFWRWTMSPSGCRLCLRMEENVDHLFIQCEFAYQVW
        IWK K+  K+K FLW L   +L T D L+++  R   +   C  C + +E   HLF  C +A QVW
Subjt:  IWKGKSPKKVKIFLWSLAYRSLNTDDKLQKKFWRWTMSPSGCRLCLRMEENVDHLFIQCEFAYQVW

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.1e-0531.58Show/hide
Query:  IWKGKSPKKVKIFLWSLAYRSLNTDDKLQKKFWRWTMS-PSGCRLCLRMEENVDHLFIQCEFAYQVWGWFARKVGL
        +W      K     W +A+  L+T D+LQ     W +S P+ C LC   +++  HLF +C+F+  VW +F     L
Subjt:  IWKGKSPKKVKIFLWSLAYRSLNTDDKLQKKFWRWTMS-PSGCRLCLRMEENVDHLFIQCEFAYQVWGWFARKVGL

AT5G48120.1 ARM repeat superfamily protein6.7e-5248.34Show/hide
Query:  GILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLVCLVENYP
        GILLL E+L CL +KPL+   +H+L+ FF+E+LADW+A+ GALVGCLAL++RK   G V+  D +++A+S  QN+QVQ+L  H+RKL+FELL CL++ + 
Subjt:  GILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLVCLVENYP

Query:  DAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEFLGCYFPI
        +A++++                                   D+ LVY +CEAIDGEKDPQCLM+ FH+VEL+A LFP P+G LAS +SDLFE +GCYFP+
Subjt:  DAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEFLGCYFPI

Query:  HFTHVSSLHAS
        HFTH     A+
Subjt:  HFTHVSSLHAS

AT5G48120.1 ARM repeat superfamily protein1.9e-0663.41Show/hide
Query:  QAASLEAITSLVKNDILTVETLVREMRMYLTTTDNIIRARG
        Q  SL+AI S ++ND L++  LVREM MYLTTTDN++RARG
Subjt:  QAASLEAITSLVKNDILTVETLVREMRMYLTTTDNIIRARG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGCTCAGCAAGCTTACTCAGTTCATCGAGTCTTTCGTCGACGTATCTCAGGCTCCATCTCAGCAGTTAGTTAGAAACGCCAGCAGAAAGCTGGGAAATCTCGG
GAATTGCAAAGTGTGTTTGAGAAAACAGTGCAACAGGGTGGGGTTTGGGAAGTTACCTCTGATAAAGATGACAAAGGTCGTCTACAGAGATGAGATTAGGAAGTGGTTAC
TGAAAATTCAGTTTCAACTACGATATTTGCTATCTTTAATGTTTCACTGGTCCTCCCACAATCAGAGGTTCAGCTTTTGCAAATTGCTCTCTGCTGCCAAACTTTTACAG
GAAATATGTATGCATAAATGCAATACAAGAAAAGCATGGAAGCAGAGGAACACCACGAACACAAAGAACAATGGACTAATGAGAATTTATGTGACACTACAGGCCGCAAG
CTTGGAAGCGATCACCTCCCTTGTGAAGAACGATATACTAACAGTAGAAACACTGGTTAGAGAGATGAGGATGTATCTGACAACTACTGATAACATTATTCGAGCCAGAG
GTACTGCTATGCAAATTTCTGATTTTGTTTTATTATTATTAGTTATTACCATTACCATTATGAATTATTATTATCTGGGGGAGGGCTTGGACCGAATACAATGGACTCTT
GAAGGGTCGGGATCCTACACCAGCAAATCTATGTTCTACCATTTGCTTGAGAGACAGTCTACTGTAAATTCGACCTTGACCAACTTGATATGGAAAGGTAAAAGCCCCAA
GAAAGTTAAGATCTTCCTTTGGTCCTTAGCTTATAGAAGTTTGAACACTGATGATAAACTTCAGAAAAAGTTTTGGAGATGGACTATGTCTCCGTCCGGTTGTAGGCTCT
GTTTGAGGATGGAAGAAAATGTGGATCATCTTTTTATCCAATGTGAGTTTGCTTATCAGGTTTGGGGGTGGTTTGCCAGGAAGGTGGGCCTTCAATTTTGCTTACCTCAG
AGAGTTGAAGAGTGGTTAGTGGAAGGGCTTTCAGCTTGGAACTTGGGGGGAAAGCCAAAATCATCAGTGGATGTGCCTTTAGAGCATTTCTTTGGCATATTTGGTATACT
TCTTCTTGGAGAACTACTGGCATGTCTTGCATCAAAGCCTCTGGATAGTGCATCAATACACAGTCTCATGGTATTCTTCACAGAGAGACTGGCAGATTGGAAAGCTTTAC
GAGGTGCCCTTGTTGGCTGCTTGGCACTGATGAGGAGGAAATTGAATGTTGGTACAGTTTCTCAGAATGATGCAAAGTCCGTTGCCCAATCTTATTTTCAAAATCTCCAA
GTACAGTCCTTGGGACAGCATGATCGGAAGCTGAGTTTTGAACTTCTGGTGTGCTTGGTAGAAAATTATCCCGATGCAGTTGTTTCACTGGTACTATATTTTTCTTGCTT
TCTTCCAGCCTTCGATCCTTTCCCTTTTCTGTTAGGAGTTATGAAAACCACAAGAATATCGATGACCTTCCTCACTGTTATCCAGGATGTTGATCTTGTATATGGAATCT
GTGAAGCCATTGACGGTGAAAAAGATCCGCAATGCTTAATGCTTACTTTTCACATTGTTGAGCTTGTGGCAAAGCTATTCCCAGATCCAACTGGAACACTTGCAAGTAGT
TCTAGCGATCTTTTTGAATTCCTGGGTTGCTATTTCCCAATCCATTTTACACATGTAAGCTCATTGCATGCTTCTCCTCTTGTTTTGTCATTTTCTTTCTTGGTTGCTTG
A
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAGCTCAGCAAGCTTACTCAGTTCATCGAGTCTTTCGTCGACGTATCTCAGGCTCCATCTCAGCAGTTAGTTAGAAACGCCAGCAGAAAGCTGGGAAATCTCGG
GAATTGCAAAGTGTGTTTGAGAAAACAGTGCAACAGGGTGGGGTTTGGGAAGTTACCTCTGATAAAGATGACAAAGGTCGTCTACAGAGATGAGATTAGGAAGTGGTTAC
TGAAAATTCAGTTTCAACTACGATATTTGCTATCTTTAATGTTTCACTGGTCCTCCCACAATCAGAGGTTCAGCTTTTGCAAATTGCTCTCTGCTGCCAAACTTTTACAG
GAAATATGTATGCATAAATGCAATACAAGAAAAGCATGGAAGCAGAGGAACACCACGAACACAAAGAACAATGGACTAATGAGAATTTATGTGACACTACAGGCCGCAAG
CTTGGAAGCGATCACCTCCCTTGTGAAGAACGATATACTAACAGTAGAAACACTGGTTAGAGAGATGAGGATGTATCTGACAACTACTGATAACATTATTCGAGCCAGAG
GTACTGCTATGCAAATTTCTGATTTTGTTTTATTATTATTAGTTATTACCATTACCATTATGAATTATTATTATCTGGGGGAGGGCTTGGACCGAATACAATGGACTCTT
GAAGGGTCGGGATCCTACACCAGCAAATCTATGTTCTACCATTTGCTTGAGAGACAGTCTACTGTAAATTCGACCTTGACCAACTTGATATGGAAAGGTAAAAGCCCCAA
GAAAGTTAAGATCTTCCTTTGGTCCTTAGCTTATAGAAGTTTGAACACTGATGATAAACTTCAGAAAAAGTTTTGGAGATGGACTATGTCTCCGTCCGGTTGTAGGCTCT
GTTTGAGGATGGAAGAAAATGTGGATCATCTTTTTATCCAATGTGAGTTTGCTTATCAGGTTTGGGGGTGGTTTGCCAGGAAGGTGGGCCTTCAATTTTGCTTACCTCAG
AGAGTTGAAGAGTGGTTAGTGGAAGGGCTTTCAGCTTGGAACTTGGGGGGAAAGCCAAAATCATCAGTGGATGTGCCTTTAGAGCATTTCTTTGGCATATTTGGTATACT
TCTTCTTGGAGAACTACTGGCATGTCTTGCATCAAAGCCTCTGGATAGTGCATCAATACACAGTCTCATGGTATTCTTCACAGAGAGACTGGCAGATTGGAAAGCTTTAC
GAGGTGCCCTTGTTGGCTGCTTGGCACTGATGAGGAGGAAATTGAATGTTGGTACAGTTTCTCAGAATGATGCAAAGTCCGTTGCCCAATCTTATTTTCAAAATCTCCAA
GTACAGTCCTTGGGACAGCATGATCGGAAGCTGAGTTTTGAACTTCTGGTGTGCTTGGTAGAAAATTATCCCGATGCAGTTGTTTCACTGGTACTATATTTTTCTTGCTT
TCTTCCAGCCTTCGATCCTTTCCCTTTTCTGTTAGGAGTTATGAAAACCACAAGAATATCGATGACCTTCCTCACTGTTATCCAGGATGTTGATCTTGTATATGGAATCT
GTGAAGCCATTGACGGTGAAAAAGATCCGCAATGCTTAATGCTTACTTTTCACATTGTTGAGCTTGTGGCAAAGCTATTCCCAGATCCAACTGGAACACTTGCAAGTAGT
TCTAGCGATCTTTTTGAATTCCTGGGTTGCTATTTCCCAATCCATTTTACACATGTAAGCTCATTGCATGCTTCTCCTCTTGTTTTGTCATTTTCTTTCTTGGTTGCTTG
A
Protein sequenceShow/hide protein sequence
MAELSKLTQFIESFVDVSQAPSQQLVRNASRKLGNLGNCKVCLRKQCNRVGFGKLPLIKMTKVVYRDEIRKWLLKIQFQLRYLLSLMFHWSSHNQRFSFCKLLSAAKLLQ
EICMHKCNTRKAWKQRNTTNTKNNGLMRIYVTLQAASLEAITSLVKNDILTVETLVREMRMYLTTTDNIIRARGTAMQISDFVLLLLVITITIMNYYYLGEGLDRIQWTL
EGSGSYTSKSMFYHLLERQSTVNSTLTNLIWKGKSPKKVKIFLWSLAYRSLNTDDKLQKKFWRWTMSPSGCRLCLRMEENVDHLFIQCEFAYQVWGWFARKVGLQFCLPQ
RVEEWLVEGLSAWNLGGKPKSSVDVPLEHFFGIFGILLLGELLACLASKPLDSASIHSLMVFFTERLADWKALRGALVGCLALMRRKLNVGTVSQNDAKSVAQSYFQNLQ
VQSLGQHDRKLSFELLVCLVENYPDAVVSLVLYFSCFLPAFDPFPFLLGVMKTTRISMTFLTVIQDVDLVYGICEAIDGEKDPQCLMLTFHIVELVAKLFPDPTGTLASS
SSDLFEFLGCYFPIHFTHVSSLHASPLVLSFSFLVA