; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg014006 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg014006
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCRM domain-containing protein
Genome locationscaffold3:33218352..33229823
RNA-Seq ExpressionSpg014006
SyntenySpg014006
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001890 - RNA-binding, CRM domain
IPR035920 - YhbY-like superfamily
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily
IPR040286 - CRM domain-containing protein At3g25440-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017679.1 putative CRM domain-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-13290.07Show/hide
Query:  MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSHGSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMRE
        MAKSLF NLRRASLL RSS LNQ  FRP+LGVPD+TFS+ K+F L +IS+PLLGFRNLS+GSVNL+ISQGKPKFET++VDPPKKDKWKTKKKLKMQR RE
Subjt:  MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSHGSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMRE

Query:  KQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVIL
        KQKRKAANKKDPRQLRVKG+KKQ+FSNAEERIKHKLEKARIKEALL+ERLKRYEV RVQGP+V+PHNLTAEERFYMKKMGQKRSNYVPIGRRG+FGGVIL
Subjt:  KQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVIL

Query:  NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR
        NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGK+YVQPEVMSPIDTLSKKR
Subjt:  NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR

XP_022935659.1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita moschata]2.4e-13290.44Show/hide
Query:  MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSHGSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMRE
        MAKSLF NLRRASLL RSS LNQ  FRP+LGVPD+TFS+ K+F L +ISKPLLGFRNLS+GSVNL+ISQGKPKFET++VDPPKKDKWKTKKKLKMQR RE
Subjt:  MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSHGSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMRE

Query:  KQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVIL
        KQKRKAANKKDPRQLRVKG+KKQ+FSNAEERIKHKLEKARIKEALL+ERLKRYEV RVQGP+V+PHNLTAEERFYMKKMGQKRSNYVPIGRRG+FGGVIL
Subjt:  KQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVIL

Query:  NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR
        NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGK+YVQPEVMSPIDTLSKKR
Subjt:  NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR

XP_022983806.1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita maxima]3.3e-12988.6Show/hide
Query:  MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSHGSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMRE
        MAKSLF NLRRASLL RS  L Q  FRP+LGVPD+TFS  K+  L +ISKP LGFRNLS+GSVNL+ISQGKPKFET++VDPPKKDKWKTKKKLKMQRMRE
Subjt:  MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSHGSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMRE

Query:  KQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVIL
        KQKRKAANKKDPRQLRVKG+KKQ+FSNAEERIKHKLEKARIKEALL+ERLKRYEV +VQGP+V+PHNLTAEERFYMKKMGQKRSNYVPIGRRG+FGGVIL
Subjt:  KQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVIL

Query:  NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR
        NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGK+YVQP VMSPIDTLSKKR
Subjt:  NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR

XP_023526219.1 CRM-domain containing factor CFM2, chloroplastic [Cucurbita pepo subsp. pepo]1.5e-12988.97Show/hide
Query:  MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSHGSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMRE
        MAKSLF NLRRASLL RSS LNQ  FRP+ GVPD+TFS  K F L +ISKPLLGFRNLS+GSVNL+ISQGKPKFET++VDPPKKDKWKTKKKLK+QR RE
Subjt:  MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSHGSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMRE

Query:  KQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVIL
        KQKRKAANKKDPRQLRVKG+KKQ+FSNAEERIKHKLEKARIKEALL+ERLKRYEV +VQGP+V+PHNLTAEERFYMKKMGQKRSNYVPIGRRG+FGGVIL
Subjt:  KQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVIL

Query:  NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR
        NMHMHWKKHETVKVFCKPCKPGQV EYAQEIARLSGGIPIQIIGDDTIIFYRGK+YVQPEVMSPIDTLSKKR
Subjt:  NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR

XP_038903000.1 CRM-domain containing factor CFM9, mitochondrial [Benincasa hispida]1.3e-13391.54Show/hide
Query:  MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSHGSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMRE
        MAKSLF NLRRASLL RSS LNQ SFRPILGV DT FSQ  +F+LP+ISKPLLGFRNLSHGSVNL+ISQGKPKFET++VDPPKKDKWKTK+KLKMQR RE
Subjt:  MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSHGSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMRE

Query:  KQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVIL
        KQKRKA NKKDPRQLRVKG+KKQ+FSNAEERIKHKLEKARIKEALL+ERLKRYEV RVQGP+VKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVIL
Subjt:  KQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVIL

Query:  NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR
        NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGK+YVQPEVMSPIDTLSKKR
Subjt:  NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR

TrEMBL top hitse value%identityAlignment
A0A1S3B7C2 CRM-domain containing factor CFM3, chloroplastic/mitochondrial9.6e-12786.76Show/hide
Query:  MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSHGSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMRE
        MAKSLF NLRRASLL RSS LNQ SFRPIL +PDT FSQ K+F   +ISKPLLGFRNLSHGSVNL+++QGKPKFET+ VDPPKK+KWKTKKKLKMQRMR 
Subjt:  MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSHGSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMRE

Query:  KQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVIL
        KQKRKAANK+DPRQLRVKG+KKQ+F NA ERIK+KLE+ARIKEALL+ERLKRYEV  VQGP+VKPHNLTAEERFY+KKMGQKRSNYVPIGRRG+FGGVIL
Subjt:  KQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVIL

Query:  NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR
        NMHMHWKKHETVKV+CKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGK+YVQPEVMSPI TLSKKR
Subjt:  NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR

A0A5A7UFD6 CRM-domain containing factor CFM39.6e-12786.76Show/hide
Query:  MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSHGSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMRE
        MAKSLF NLRRASLL RSS LNQ SFRPIL +PDT FSQ K+F   +ISKPLLGFRNLSHGSVNL+++QGKPKFET+ VDPPKK+KWKTKKKLKMQRMR 
Subjt:  MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSHGSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMRE

Query:  KQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVIL
        KQKRKAANK+DPRQLRVKG+KKQ+F NA ERIK+KLE+ARIKEALL+ERLKRYEV  VQGP+VKPHNLTAEERFY+KKMGQKRSNYVPIGRRG+FGGVIL
Subjt:  KQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVIL

Query:  NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR
        NMHMHWKKHETVKV+CKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGK+YVQPEVMSPI TLSKKR
Subjt:  NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR

A0A6J1DSE1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic1.6e-12687.5Show/hide
Query:  MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSHGSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMRE
        MA SLF NLRRASLLLRS  LNQ+SFRPILGVPDT FSQFKHF LP+ISKP LGFRN SHGSV+L+ISQGKPKFET++VDPPKK KWKTKK+LK+QR RE
Subjt:  MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSHGSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMRE

Query:  KQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVIL
        K+KR+AANKKDPR LRVKG+KKQ+FSNAEERIKHKL KARIKEALL+ERLKRYEV  VQGP+VKP NLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVIL
Subjt:  KQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVIL

Query:  NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR
        NMHMHWKKHETVKV  KPCKPGQVH+YAQEIARLSGGI IQIIGDD IIFYRGKDYVQPEVMSPIDTLSKKR
Subjt:  NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR

A0A6J1F621 uncharacterized CRM domain-containing protein At3g25440, chloroplastic1.2e-13290.44Show/hide
Query:  MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSHGSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMRE
        MAKSLF NLRRASLL RSS LNQ  FRP+LGVPD+TFS+ K+F L +ISKPLLGFRNLS+GSVNL+ISQGKPKFET++VDPPKKDKWKTKKKLKMQR RE
Subjt:  MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSHGSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMRE

Query:  KQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVIL
        KQKRKAANKKDPRQLRVKG+KKQ+FSNAEERIKHKLEKARIKEALL+ERLKRYEV RVQGP+V+PHNLTAEERFYMKKMGQKRSNYVPIGRRG+FGGVIL
Subjt:  KQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVIL

Query:  NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR
        NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGK+YVQPEVMSPIDTLSKKR
Subjt:  NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR

A0A6J1J3F1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic1.6e-12988.6Show/hide
Query:  MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSHGSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMRE
        MAKSLF NLRRASLL RS  L Q  FRP+LGVPD+TFS  K+  L +ISKP LGFRNLS+GSVNL+ISQGKPKFET++VDPPKKDKWKTKKKLKMQRMRE
Subjt:  MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSHGSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMRE

Query:  KQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVIL
        KQKRKAANKKDPRQLRVKG+KKQ+FSNAEERIKHKLEKARIKEALL+ERLKRYEV +VQGP+V+PHNLTAEERFYMKKMGQKRSNYVPIGRRG+FGGVIL
Subjt:  KQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVIL

Query:  NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR
        NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGK+YVQP VMSPIDTLSKKR
Subjt:  NMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR

SwissProt top hitse value%identityAlignment
F4J2U9 CRM-domain containing factor CFM3A, chloroplastic/mitochondrial5.6e-1533.33Show/hide
Query:  RFSNAEERIKHKLEKARIKEALLMERLKRYEVS-RVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPG
        R  N   +++ KL  A  K       L + EV  +       P ++T EERF  +K+G K   ++ +GRRG+F G + NMH+HWK  E VK+  K     
Subjt:  RFSNAEERIKHKLEKARIKEALLMERLKRYEVS-RVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPG

Query:  QVHEYAQEIARLSGGIPI---QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR
         V + A  +   SGGI +   ++     II YRG+DY +P ++ P + L+K++
Subjt:  QVHEYAQEIARLSGGIPI---QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR

Q2R1U8 CRM-domain containing factor CFM3, chloroplastic/mitochondrial3.5e-1737.6Show/hide
Query:  PHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI---QIIGDDTIIFYRGKDYVQPEV
        P  +T EERF  +K+G +   ++ +GRRG+F G I NMH+HWK  E VK+  K    G V + A  +   SGGI +   ++     I+ +RGKDY +P  
Subjt:  PHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI---QIIGDDTIIFYRGKDYVQPEV

Query:  MSPIDTLSKKRLRSWALLVGCEVDR
        + P + LSK++    AL    E+ R
Subjt:  MSPIDTLSKKRLRSWALLVGCEVDR

Q67XL4 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic1.0e-3246.08Show/hide
Query:  PKFETNDVDPPKKDKWKTKKKLKMQRM-REKQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTA
        P  ET D D  K +   ++      ++ R+K K K A  +  +  R K +K+     +EE+I +KL KAR KE  LME +K+ E S        P  LT 
Subjt:  PKFETNDVDPPKKDKWKTKKKLKMQRM-REKQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTA

Query:  EERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQP--EVMSPIDTL
        EE FY  KMG K  NYVP+GRRGI+ GVILNMH+HWKKH+T++V  K   P +V E A E+ARL+GGI + +   +TII YRGK+YVQP  E+MSP  TL
Subjt:  EERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQP--EVMSPIDTL

Query:  SKKR
         +K+
Subjt:  SKKR

Q8L7C2 CRM-domain containing factor CFM2, chloroplastic2.4e-1329.74Show/hide
Query:  KTKKKLKMQRMREKQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYE-----VSRVQGPM---VKPHNLTAEERFYMKKM
        + ++++K + ++E  + +A ++KD  Q     + K R  N+ E I   LEK  +K ++ +E+    E     +   + P    +    +T +E++ ++K+
Subjt:  KTKKKLKMQRMREKQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYE-----VSRVQGPM---VKPHNLTAEERFYMKKM

Query:  GQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI---QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKK
        G K   ++ +GRRG+F G I NMH+HWK  E VK+ C        H+ A+ +   SGGI +    +     II YRGK+Y +P+ + P   LSK+
Subjt:  GQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI---QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKK

Q9LT57 CRM-domain containing factor CFM9, mitochondrial3.6e-3041.3Show/hide
Query:  TKKKLKMQRMREKQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVP
        T +   M+   E + RK +  K  R++R   + K++    EER+ + L++A+ K ALL+++LK+Y++  +  P+  P   T+E+    KK+G K  NYVP
Subjt:  TKKKLKMQRMREKQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVP

Query:  IGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR
        +G RG+FGGV+ NMHMHWK HETV+V C      ++ E A  IARLSGG+ I I    TII +RG++Y QP+ + P++TL+K++
Subjt:  IGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR

Arabidopsis top hitse value%identityAlignment
AT2G28480.1 RNA-binding CRS1 / YhbY (CRM) domain protein1.8e-9366.42Show/hide
Query:  MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSH--GSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRM
        MA +    LR+AS  LRSS+    S R +L +    +     F LP  ++P+   RN SH  G+VNL+IS+GKPKFET ++DPPKK KW TKK+LK++R 
Subjt:  MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSH--GSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRM

Query:  REKQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGV
        +E+++R AAN+KDPR+L VKG KK++F NAEERIK+KLEKA+IKEALL+ERLKRYEV++VQGP V+PH +T EERFY+KKMGQKRSNYVPIGRRG+FGGV
Subjt:  REKQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGV

Query:  ILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR
        ILNMH+HWKKHETVKV C   KPGQV +YA+E+A+LSGG+P+ IIGDDTIIFYRGK YVQP+VMSPIDTLSKKR
Subjt:  ILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR

AT3G25440.1 RNA-binding CRS1 / YhbY (CRM) domain protein7.3e-3446.08Show/hide
Query:  PKFETNDVDPPKKDKWKTKKKLKMQRM-REKQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTA
        P  ET D D  K +   ++      ++ R+K K K A  +  +  R K +K+     +EE+I +KL KAR KE  LME +K+ E S        P  LT 
Subjt:  PKFETNDVDPPKKDKWKTKKKLKMQRM-REKQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTA

Query:  EERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQP--EVMSPIDTL
        EE FY  KMG K  NYVP+GRRGI+ GVILNMH+HWKKH+T++V  K   P +V E A E+ARL+GGI + +   +TII YRGK+YVQP  E+MSP  TL
Subjt:  EERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQP--EVMSPIDTL

Query:  SKKR
         +K+
Subjt:  SKKR

AT3G25440.2 RNA-binding CRS1 / YhbY (CRM) domain protein7.3e-3446.08Show/hide
Query:  PKFETNDVDPPKKDKWKTKKKLKMQRM-REKQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTA
        P  ET D D  K +   ++      ++ R+K K K A  +  +  R K +K+     +EE+I +KL KAR KE  LME +K+ E S        P  LT 
Subjt:  PKFETNDVDPPKKDKWKTKKKLKMQRM-REKQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTA

Query:  EERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQP--EVMSPIDTL
        EE FY  KMG K  NYVP+GRRGI+ GVILNMH+HWKKH+T++V  K   P +V E A E+ARL+GGI + +   +TII YRGK+YVQP  E+MSP  TL
Subjt:  EERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQP--EVMSPIDTL

Query:  SKKR
         +K+
Subjt:  SKKR

AT3G27550.1 RNA-binding CRS1 / YhbY (CRM) domain protein2.6e-3141.3Show/hide
Query:  TKKKLKMQRMREKQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVP
        T +   M+   E + RK +  K  R++R   + K++    EER+ + L++A+ K ALL+++LK+Y++  +  P+  P   T+E+    KK+G K  NYVP
Subjt:  TKKKLKMQRMREKQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVP

Query:  IGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR
        +G RG+FGGV+ NMHMHWK HETV+V C      ++ E A  IARLSGG+ I I    TII +RG++Y QP+ + P++TL+K++
Subjt:  IGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR

AT4G13070.1 RNA-binding CRS1 / YhbY (CRM) domain protein8.5e-5148.65Show/hide
Query:  LLGFRNLSHGSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLK
        L   R LS+ ++ L       +F  N+V     +   T+K+ K +R +  +K K     + R  R+K +KK    N E RI++KLEKA+ KE  L+E+L+
Subjt:  LLGFRNLSHGSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLK

Query:  RYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPC-KPGQVHEYAQEIARLSGGIPIQIIGDDTIIF
        +Y+V +       P +LT EE+ Y+K+ G+KR N+V +GRRG+FGGV+LN+H+HWKKHETVKV CKPC KPGQVHEYA+E+ARLS GI I +  ++TI+ 
Subjt:  RYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPC-KPGQVHEYAQEIARLSGGIPIQIIGDDTIIF

Query:  YRGKDYVQPEVMSPIDTLSKKR
        YRGK+YV+PEVMSP+DTLSK +
Subjt:  YRGKDYVQPEVMSPIDTLSKKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAATCTTTGTTTTGTAATCTTCGTAGAGCTTCTCTGCTTCTCAGATCTTCATTTCTGAACCAATCGTCTTTTAGACCTATTCTTGGGGTCCCTGACACCACATT
CTCTCAATTCAAACACTTTTCTCTACCCAGCATCTCAAAACCTTTGTTGGGATTTAGAAACTTAAGCCATGGTTCCGTGAATCTTATCATATCCCAAGGGAAACCAAAGT
TTGAAACAAATGATGTGGATCCTCCAAAAAAGGATAAGTGGAAGACTAAAAAAAAGTTGAAGATGCAGCGAATGAGAGAGAAGCAGAAAAGAAAAGCAGCAAATAAGAAA
GACCCTCGTCAACTGCGTGTTAAGGGGGAAAAAAAGCAAAGATTTTCAAATGCCGAAGAGAGAATCAAGCACAAACTGGAAAAAGCCAGGATTAAGGAGGCATTGCTAAT
GGAGAGATTAAAGCGATATGAAGTTTCTAGAGTTCAAGGTCCTATGGTGAAACCACACAATCTGACTGCTGAGGAACGGTTTTATATGAAGAAAATGGGTCAAAAGAGGT
CTAATTATGTACCGATTGGAAGAAGAGGAATTTTTGGAGGTGTGATTCTAAACATGCACATGCATTGGAAGAAACACGAAACAGTTAAAGTTTTTTGCAAGCCTTGTAAA
CCTGGCCAAGTGCATGAGTATGCACAAGAAATCGCAAGACTGAGTGGAGGAATCCCGATACAAATAATCGGTGATGATACTATTATCTTTTATCGAGGAAAGGATTATGT
GCAACCAGAAGTTATGTCACCAATTGATACATTGTCTAAGAAACGGCTTCGTTCTTGGGCCTTATTGGTTGGATGTGAGGTGGATCGACTTTCTTCCTCTTATCTTGGGC
TTCCGCTAGGAGGAAATTTGAGGAGCAAAGTGTTTTGGCATCTGGTTTTGGATAAGGTTAAGAGATATTTGTCCACTTGGAGGAAGGCTTTTTTCCAAAAAAGAGGTGAA
AAACAAGCGGATGAATATGATATGAGGCAGTCAAGACTTGACGACGACTACCTTATGCTACCATTGGTTTTAAGCATTTTGCAAGAGTTGTATGATTTGCATGGTCTTTG
TCAGGGAGCCTGGTGCTTAGCGGGCGACTTCAATATGATTAGATGGGCTGAGGACAGGCTGAAAATTCGCAACCAGTCGAGGAGTATGAAAAAATTTAACCGGTTCATAT
CTGATGTAGATTTAATTGATTCGCCTATGTGTAACGGGAAGTTCACGTGCTCCAAGAAGAAGGAGATTTTAGAGCAAATTGATCATATTGATCGGTTGGAGGAGGCTAAC
GAGATTCAGGGGCAGAATGTAGAGGATAGAAAGAAACTTAAGATTGAATTACTGGAGATCACGATTGAAGAGCAAAGGGCACTTAGCCAAAGGTGCAAACTTAGATGGTT
AAAAGAGGGGGACGAGAACTCCACTTTTTTCCATAGATGGGCCGCGGCTAGGAAGAACAAAGCATTCATTTCATATGCTGACGACACTCTGGTGTTTTGTCCGAATGATG
GTGCTGCCACTGAAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAATCTTTGTTTTGTAATCTTCGTAGAGCTTCTCTGCTTCTCAGATCTTCATTTCTGAACCAATCGTCTTTTAGACCTATTCTTGGGGTCCCTGACACCACATT
CTCTCAATTCAAACACTTTTCTCTACCCAGCATCTCAAAACCTTTGTTGGGATTTAGAAACTTAAGCCATGGTTCCGTGAATCTTATCATATCCCAAGGGAAACCAAAGT
TTGAAACAAATGATGTGGATCCTCCAAAAAAGGATAAGTGGAAGACTAAAAAAAAGTTGAAGATGCAGCGAATGAGAGAGAAGCAGAAAAGAAAAGCAGCAAATAAGAAA
GACCCTCGTCAACTGCGTGTTAAGGGGGAAAAAAAGCAAAGATTTTCAAATGCCGAAGAGAGAATCAAGCACAAACTGGAAAAAGCCAGGATTAAGGAGGCATTGCTAAT
GGAGAGATTAAAGCGATATGAAGTTTCTAGAGTTCAAGGTCCTATGGTGAAACCACACAATCTGACTGCTGAGGAACGGTTTTATATGAAGAAAATGGGTCAAAAGAGGT
CTAATTATGTACCGATTGGAAGAAGAGGAATTTTTGGAGGTGTGATTCTAAACATGCACATGCATTGGAAGAAACACGAAACAGTTAAAGTTTTTTGCAAGCCTTGTAAA
CCTGGCCAAGTGCATGAGTATGCACAAGAAATCGCAAGACTGAGTGGAGGAATCCCGATACAAATAATCGGTGATGATACTATTATCTTTTATCGAGGAAAGGATTATGT
GCAACCAGAAGTTATGTCACCAATTGATACATTGTCTAAGAAACGGCTTCGTTCTTGGGCCTTATTGGTTGGATGTGAGGTGGATCGACTTTCTTCCTCTTATCTTGGGC
TTCCGCTAGGAGGAAATTTGAGGAGCAAAGTGTTTTGGCATCTGGTTTTGGATAAGGTTAAGAGATATTTGTCCACTTGGAGGAAGGCTTTTTTCCAAAAAAGAGGTGAA
AAACAAGCGGATGAATATGATATGAGGCAGTCAAGACTTGACGACGACTACCTTATGCTACCATTGGTTTTAAGCATTTTGCAAGAGTTGTATGATTTGCATGGTCTTTG
TCAGGGAGCCTGGTGCTTAGCGGGCGACTTCAATATGATTAGATGGGCTGAGGACAGGCTGAAAATTCGCAACCAGTCGAGGAGTATGAAAAAATTTAACCGGTTCATAT
CTGATGTAGATTTAATTGATTCGCCTATGTGTAACGGGAAGTTCACGTGCTCCAAGAAGAAGGAGATTTTAGAGCAAATTGATCATATTGATCGGTTGGAGGAGGCTAAC
GAGATTCAGGGGCAGAATGTAGAGGATAGAAAGAAACTTAAGATTGAATTACTGGAGATCACGATTGAAGAGCAAAGGGCACTTAGCCAAAGGTGCAAACTTAGATGGTT
AAAAGAGGGGGACGAGAACTCCACTTTTTTCCATAGATGGGCCGCGGCTAGGAAGAACAAAGCATTCATTTCATATGCTGACGACACTCTGGTGTTTTGTCCGAATGATG
GTGCTGCCACTGAAAATTGA
Protein sequenceShow/hide protein sequence
MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSHGSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMREKQKRKAANKK
DPRQLRVKGEKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCK
PGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRLRSWALLVGCEVDRLSSSYLGLPLGGNLRSKVFWHLVLDKVKRYLSTWRKAFFQKRGE
KQADEYDMRQSRLDDDYLMLPLVLSILQELYDLHGLCQGAWCLAGDFNMIRWAEDRLKIRNQSRSMKKFNRFISDVDLIDSPMCNGKFTCSKKKEILEQIDHIDRLEEAN
EIQGQNVEDRKKLKIELLEITIEEQRALSQRCKLRWLKEGDENSTFFHRWAAARKNKAFISYADDTLVFCPNDGAATEN