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Spg014143 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg014143
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionpolcalcin Syr v 3-like
Genome locationscaffold3:36967983..36968237
RNA-Seq ExpressionSpg014143
SyntenySpg014143
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150429.1 polcalcin Syr v 3-like [Momordica charantia]1.8e-3288.1Show/hide
Query:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCKRL
        MAD+ RNR ECERI  RFDSNGDG+ISLSELESAL ALGSSSPEEVRRRMSEIDKDG+GYISL+ELC+FQRANPDLMKEVCKRL
Subjt:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCKRL

XP_022929895.1 polcalcin Phl p 7-like [Cucurbita moschata]1.8e-3288.1Show/hide
Query:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCKRL
        MA+ E  R ECERI  RFD NGDGKISLSELE+ALHALGSSSPEEVRRRMSEIDKDGNG+ISLDELCEFQRANPDLMKEVCKRL
Subjt:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCKRL

XP_022992461.1 polcalcin Phl p 7-like [Cucurbita maxima]4.3e-3186.9Show/hide
Query:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCKRL
        MA+ E  R ECERI  RFD NGDGKISLSELE+ALHALGSSSPEEVRRRMSEIDKDGNG+ISLDEL EFQRANPDLMKEVCKRL
Subjt:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCKRL

XP_023549323.1 polcalcin Phl p 7-like [Cucurbita pepo subsp. pepo]5.1e-3286.9Show/hide
Query:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCKRL
        MA+ E  R ECERI  RFD NGDGKISLSELE+ALHALGSSSPEEVRRRMSEIDKDGNG+ISLDELCEFQRANPDLMKEVC+RL
Subjt:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCKRL

XP_038886760.1 polcalcin Phl p 7-like [Benincasa hispida]1.3e-3289.29Show/hide
Query:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCKRL
        MAD E  R ECERI KRFDS+GDGKISLSELESAL ALGSSSPEEVRRRMSEIDKDGNG+ISLDELC+FQRANPDLMKEVCKRL
Subjt:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCKRL

TrEMBL top hitse value%identityAlignment
A0A0A0KAW9 Uncharacterized protein1.5e-3286.9Show/hide
Query:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCKRL
        MAD + NR ECERI KRFD NGDGKISLSELE+ALHALGSS+PEEV RRMSEIDKDGNGYISL+ELC+FQRANPDLMKEVCKRL
Subjt:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCKRL

A0A5A7V7E6 Polcalcin Syr v 3-like6.7e-3083.33Show/hide
Query:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCKRL
        MAD +  + ECERI KRFD NGDGKISLSELE+ALHALGSS+PEEV RRMSEIDKDGNG+ISL+ELC+FQRANPDLMKEVCKRL
Subjt:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCKRL

A0A6J1DA15 polcalcin Syr v 3-like8.5e-3388.1Show/hide
Query:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCKRL
        MAD+ RNR ECERI  RFDSNGDG+ISLSELESAL ALGSSSPEEVRRRMSEIDKDG+GYISL+ELC+FQRANPDLMKEVCKRL
Subjt:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCKRL

A0A6J1EVJ6 polcalcin Phl p 7-like8.5e-3388.1Show/hide
Query:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCKRL
        MA+ E  R ECERI  RFD NGDGKISLSELE+ALHALGSSSPEEVRRRMSEIDKDGNG+ISLDELCEFQRANPDLMKEVCKRL
Subjt:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCKRL

A0A6J1JTM0 polcalcin Phl p 7-like2.1e-3186.9Show/hide
Query:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCKRL
        MA+ E  R ECERI  RFD NGDGKISLSELE+ALHALGSSSPEEVRRRMSEIDKDGNG+ISLDEL EFQRANPDLMKEVCKRL
Subjt:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCKRL

SwissProt top hitse value%identityAlignment
O81092 Polcalcin Ole e 35.7e-1857.32Show/hide
Query:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCK
        MAD+ +   E ERI KRFD+NGDGKIS SEL   L  LGS +PEE++R M+EID DG+G+IS +E   F RAN  L+K+V K
Subjt:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCK

O82040 Polcalcin Phl p 73.3e-1860.81Show/hide
Query:  EECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCK
        ++ ERI KRFD+NGDGKISLSEL  AL  LGS+S +EV+R M+EID DG+G+I  +E   F  ANP LMK+V K
Subjt:  EECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCK

P58171 Polcalcin Syr v 31.7e-1760.27Show/hide
Query:  ECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCK
        E ERI KRFD+NGDGKIS SEL   L  LGS +PEE++R M+EID DG+G+IS +E  +F RAN  L+K+V K
Subjt:  ECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCK

P94092 Polcalcin Cyn d 79.7e-1860.27Show/hide
Query:  ECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCK
        + E I KRFD+NGDGKISL+EL  AL  LGS+S +EV+R M+EID DG+G+I  DE   F  ANP LMK+V K
Subjt:  ECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCK

Q84V36 Polcalcin Che a 39.7e-1858.75Show/hide
Query:  DEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCK
        D  ++  + ERI KRFD+NGDGKIS SEL  AL  LGS +P+EVRR M+EID DG+G+IS DE  +F RAN  L+K+V K
Subjt:  DEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCK

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein1.7e-0945.59Show/hide
Query:  NREECERILKRFDSNGDGKISLSELESALHALGSSSPE-EVRRRMSEIDKDGNGYISLDELCEFQRAN
        N EE +++  +FDSNGDGKIS+ EL     A+G+S  E E+ R + E+D D +GYI+LDE     R++
Subjt:  NREECERILKRFDSNGDGKISLSELESALHALGSSSPE-EVRRRMSEIDKDGNGYISLDELCEFQRAN

AT1G18210.2 Calcium-binding EF-hand family protein1.7e-0945.59Show/hide
Query:  NREECERILKRFDSNGDGKISLSELESALHALGSSSPE-EVRRRMSEIDKDGNGYISLDELCEFQRAN
        N EE +++  +FDSNGDGKIS+ EL     A+G+S  E E+ R + E+D D +GYI+LDE     R++
Subjt:  NREECERILKRFDSNGDGKISLSELESALHALGSSSPE-EVRRRMSEIDKDGNGYISLDELCEFQRAN

AT3G03430.1 Calcium-binding EF-hand family protein3.2e-1653.66Show/hide
Query:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCK
        MAD     E  +RI K+FD+NGDGKIS +EL  AL  LGS + E+++R M+EID DG+GYIS  E  +F  AN  LMK+V K
Subjt:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCK

AT5G17480.1 pollen calcium-binding protein 15.5e-1653.66Show/hide
Query:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCK
        MAD     E  +RI K+FD+NGDGKIS +ELE AL  LGS + ++V+R M+EID DG+G IS  E  +F  AN  LMK+V K
Subjt:  MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCK

AT5G37770.1 EF hand calcium-binding protein family1.3e-0948.28Show/hide
Query:  EECERILKRFDSNGDGKISLSELESALHALG-SSSPEEVRRRMSEIDKDGNGYISLDE
        ++ +++ +RFD NGDGKIS+ EL+  + AL  ++SPEE    M + D DGNG+I LDE
Subjt:  EECERILKRFDSNGDGKISLSELESALHALG-SSSPEEVRRRMSEIDKDGNGYISLDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACGAGGAGCGAAACAGGGAGGAATGCGAGCGAATCTTGAAGCGGTTCGACAGCAACGGCGACGGCAAGATCTCGCTGTCGGAGCTGGAGAGCGCTCTGCACGC
GCTCGGCTCGTCCTCGCCGGAGGAGGTCCGGCGGCGGATGTCGGAGATCGACAAGGACGGCAATGGCTACATTTCGCTCGACGAACTCTGCGAATTCCAGAGGGCGAATC
CCGATTTGATGAAGGAGGTTTGCAAAAGGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGACGAGGAGCGAAACAGGGAGGAATGCGAGCGAATCTTGAAGCGGTTCGACAGCAACGGCGACGGCAAGATCTCGCTGTCGGAGCTGGAGAGCGCTCTGCACGC
GCTCGGCTCGTCCTCGCCGGAGGAGGTCCGGCGGCGGATGTCGGAGATCGACAAGGACGGCAATGGCTACATTTCGCTCGACGAACTCTGCGAATTCCAGAGGGCGAATC
CCGATTTGATGAAGGAGGTTTGCAAAAGGCTTTAG
Protein sequenceShow/hide protein sequence
MADEERNREECERILKRFDSNGDGKISLSELESALHALGSSSPEEVRRRMSEIDKDGNGYISLDELCEFQRANPDLMKEVCKRL