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Spg014151 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg014151
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationscaffold3:47718003..47718772
RNA-Seq ExpressionSpg014151
SyntenySpg014151
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039770.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.7e-1046.67Show/hide
Query:  VELLAIKPKSQKDILFQNIFVA---SIWIKRNSRIFKDKDRSVAQFWEDIIALAAFWSSSSDLFSNYEASSISLN
        + + + K K++K+++  N + +   +IW++RN+RIF  K+++VA+ WEDI ALA  W+S S LFSNY+ASSI+LN
Subjt:  VELLAIKPKSQKDILFQNIFVA---SIWIKRNSRIFKDKDRSVAQFWEDIIALAAFWSSSSDLFSNYEASSISLN

KAA0040037.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.6e-1046.67Show/hide
Query:  VELLAIKPKSQKDILFQNIFVA---SIWIKRNSRIFKDKDRSVAQFWEDIIALAAFWSSSSDLFSNYEASSISLN
        + + + K K++K+++  N + +   +IW++RN+RIF  K+++VA+ WEDI ALA  W+S S LFSNY+ASSI+LN
Subjt:  VELLAIKPKSQKDILFQNIFVA---SIWIKRNSRIFKDKDRSVAQFWEDIIALAAFWSSSSDLFSNYEASSISLN

TYK06777.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.7e-1046.67Show/hide
Query:  VELLAIKPKSQKDILFQNIFVA---SIWIKRNSRIFKDKDRSVAQFWEDIIALAAFWSSSSDLFSNYEASSISLN
        + + + K K++K+++  N + +   +IW++RN+RIF  K+++VA+ WEDI ALA  W+S S LFSNY+ASSI+LN
Subjt:  VELLAIKPKSQKDILFQNIFVA---SIWIKRNSRIFKDKDRSVAQFWEDIIALAAFWSSSSDLFSNYEASSISLN

TYK14764.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.7e-1046.67Show/hide
Query:  VELLAIKPKSQKDILFQNIFVA---SIWIKRNSRIFKDKDRSVAQFWEDIIALAAFWSSSSDLFSNYEASSISLN
        + + + K K++K+++  N + +   +IW++RN+RIF  K+++VA+ WEDI ALA  W+S S LFSNY+ASSI+LN
Subjt:  VELLAIKPKSQKDILFQNIFVA---SIWIKRNSRIFKDKDRSVAQFWEDIIALAAFWSSSSDLFSNYEASSISLN

XP_016902461.1 PREDICTED: LINE-1 retrotransposable element ORF2 protein [Cucumis melo]2.7e-1046.67Show/hide
Query:  VELLAIKPKSQKDILFQNIFVA---SIWIKRNSRIFKDKDRSVAQFWEDIIALAAFWSSSSDLFSNYEASSISLN
        + + + K K++K+++  N + +   +IW++RN+RIF  K+++VA+ WEDI ALA  W+S S LFSNY+ASSI+LN
Subjt:  VELLAIKPKSQKDILFQNIFVA---SIWIKRNSRIFKDKDRSVAQFWEDIIALAAFWSSSSDLFSNYEASSISLN

TrEMBL top hitse value%identityAlignment
A0A5A7TES3 LINE-1 retrotransposable element ORF2 protein7.7e-1146.67Show/hide
Query:  VELLAIKPKSQKDILFQNIFVA---SIWIKRNSRIFKDKDRSVAQFWEDIIALAAFWSSSSDLFSNYEASSISLN
        + + + K K++K+++  N + +   +IW++RN+RIF  K+++VA+ WEDI ALA  W+S S LFSNY+ASSI+LN
Subjt:  VELLAIKPKSQKDILFQNIFVA---SIWIKRNSRIFKDKDRSVAQFWEDIIALAAFWSSSSDLFSNYEASSISLN

A0A5D3C4J1 LINE-1 retrotransposable element ORF2 protein1.3e-1046.67Show/hide
Query:  VELLAIKPKSQKDILFQNIFVA---SIWIKRNSRIFKDKDRSVAQFWEDIIALAAFWSSSSDLFSNYEASSISLN
        + + + K K++K+++  N + +   +IW++RN+RIF  K+++VA+ WEDI ALA  W+S S LFSNY+ASSI+LN
Subjt:  VELLAIKPKSQKDILFQNIFVA---SIWIKRNSRIFKDKDRSVAQFWEDIIALAAFWSSSSDLFSNYEASSISLN

A0A5D3CPL6 LINE-1 retrotransposable element ORF2 protein1.3e-1046.67Show/hide
Query:  VELLAIKPKSQKDILFQNIFVA---SIWIKRNSRIFKDKDRSVAQFWEDIIALAAFWSSSSDLFSNYEASSISLN
        + + + K K++K+++  N + +   +IW++RN+RIF  K+++VA+ WEDI ALA  W+S S LFSNY+ASSI+LN
Subjt:  VELLAIKPKSQKDILFQNIFVA---SIWIKRNSRIFKDKDRSVAQFWEDIIALAAFWSSSSDLFSNYEASSISLN

A0A5D3CUY9 LINE-1 retrotransposable element ORF2 protein1.3e-1046.67Show/hide
Query:  VELLAIKPKSQKDILFQNIFVA---SIWIKRNSRIFKDKDRSVAQFWEDIIALAAFWSSSSDLFSNYEASSISLN
        + + + K K++K+++  N + +   +IW++RN+RIF  K+++VA+ WEDI ALA  W+S S LFSNY+ASSI+LN
Subjt:  VELLAIKPKSQKDILFQNIFVA---SIWIKRNSRIFKDKDRSVAQFWEDIIALAAFWSSSSDLFSNYEASSISLN

A0A5D3DM72 LINE-1 retrotransposable element ORF2 protein1.3e-1046.67Show/hide
Query:  VELLAIKPKSQKDILFQNIFVA---SIWIKRNSRIFKDKDRSVAQFWEDIIALAAFWSSSSDLFSNYEASSISLN
        + + + K K++K+++  N + +   +IW++RN+RIF  K+++VA+ WEDI ALA  W+S S LFSNY+ASSI+LN
Subjt:  VELLAIKPKSQKDILFQNIFVA---SIWIKRNSRIFKDKDRSVAQFWEDIIALAAFWSSSSDLFSNYEASSISLN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGTTCGAAGCTAGAGGTATAATCTCTTCAAGACCTTATCAGATTCAGACGTTCAGTGTTGAACTTCTTGCCATCAAACCAAAGTCTCAGAAAGATATTCTTTTTCA
GAATATTTTTGTTGCTTCTATTTGGATCAAAAGAAATAGTCGCATCTTCAAGGACAAGGATCGTTCAGTAGCTCAGTTTTGGGAGGATATTATAGCTCTTGCTGCTTTCT
GGTCTTCATCTTCTGATCTCTTTTCCAACTATGAAGCGTCTTCCATTTCTCTTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTGTTCGAAGCTAGAGGTATAATCTCTTCAAGACCTTATCAGATTCAGACGTTCAGTGTTGAACTTCTTGCCATCAAACCAAAGTCTCAGAAAGATATTCTTTTTCA
GAATATTTTTGTTGCTTCTATTTGGATCAAAAGAAATAGTCGCATCTTCAAGGACAAGGATCGTTCAGTAGCTCAGTTTTGGGAGGATATTATAGCTCTTGCTGCTTTCT
GGTCTTCATCTTCTGATCTCTTTTCCAACTATGAAGCGTCTTCCATTTCTCTTAATTAA
Protein sequenceShow/hide protein sequence
MLFEARGIISSRPYQIQTFSVELLAIKPKSQKDILFQNIFVASIWIKRNSRIFKDKDRSVAQFWEDIIALAAFWSSSSDLFSNYEASSISLN