; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg014172 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg014172
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionmethyl-CpG-binding domain-containing protein 4-like
Genome locationscaffold3:43722421..43724619
RNA-Seq ExpressionSpg014172
SyntenySpg014172
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001739 - Methyl-CpG DNA binding
IPR011124 - Zinc finger, CW-type
IPR016177 - DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057559.1 methyl-CpG-binding domain-containing protein 4 [Cucumis melo var. makuwa]2.6e-7378.09Show/hide
Query:  AAARPPKTPMKSAGLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFS
        AAARPPKTP+KS  + V L+AAQCEEC KWRLISTQEEYEDIRS++IEEPFTC R+TDTSCEDPPDI+Y+ TRTW IDKPNIPKTP+GF RRLVLRKNF+
Subjt:  AAARPPKTPMKSAGLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFS

Query:  KLDASYITPTGKRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAKKLKKTKDESVHTD
        K DA Y+TPTGK VRS  E+ A+V+ANPQYKDI LS+FSFAVPK++EETVPESILKE LNSSSAK++KKTK+ES HT+
Subjt:  KLDASYITPTGKRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAKKLKKTKDESVHTD

XP_004148873.1 methyl-CpG-binding domain-containing protein 4 [Cucumis sativus]2.3e-7480.34Show/hide
Query:  AAARPPKTPMKSAGLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFS
        AA RPPKTP KS  L V L+AAQCEEC KWRLISTQEEYE IRSK+IEEPFTC RKTDTSCEDPPDIDY+ TRTW IDKPNIPKTP+GF RRLVLRKNF+
Subjt:  AAARPPKTPMKSAGLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFS

Query:  KLDASYITPTGKRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAKKLKKTKDESVHTD
        K DA Y+TPTGK VRSS E+ A+VEANPQYKDI LS+FSFAVPK++EETVPESILKE LNSSSAK++KKTK+ES HT+
Subjt:  KLDASYITPTGKRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAKKLKKTKDESVHTD

XP_008451407.1 PREDICTED: methyl-CpG-binding domain-containing protein 4 [Cucumis melo]1.3e-7277.53Show/hide
Query:  AAARPPKTPMKSAGLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFS
        AAARPPKTP+KS  + V L+A QCEEC KWRLISTQEEYEDIRS++IEEPFTC RKTDTSCEDPPDI+Y+ TRTW IDKPNIPKTP+GF RRLVLRKNF+
Subjt:  AAARPPKTPMKSAGLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFS

Query:  KLDASYITPTGKRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAKKLKKTKDESVHTD
        K DA Y+TPTGK VRS  E+ A+V+ANPQYKDI LS+FSFAVPK++EETVPESILKE LNSSSAK++KKTK+ES +T+
Subjt:  KLDASYITPTGKRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAKKLKKTKDESVHTD

XP_022150154.1 methyl-CpG-binding domain-containing protein 4-like [Momordica charantia]3.6e-7580.45Show/hide
Query:  MAAARPPKTPMKSAGLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNF
        MA ARPP+ P+KS  L VDLYAAQCEEC KWRLISTQEEYEDIRSK+IEEPFTC RKTDTSCED  DIDY+ TRTWVIDKPNIPKTP+GFKRRLVLRK+F
Subjt:  MAAARPPKTPMKSAGLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNF

Query:  SKLDASYITPTGKRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAKKLKKTKDESVHTD
        SK DA YITPTGK VRSS EM +++EANP+YKDIPLS FSFAVPKV+EETVPESIL+E L+SSSAK++KK KD+S HTD
Subjt:  SKLDASYITPTGKRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAKKLKKTKDESVHTD

XP_038896997.1 methyl-CpG-binding domain-containing protein 4-like [Benincasa hispida]4.5e-7883.8Show/hide
Query:  MAAARPPKTPMKSAGLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNF
        MAAARPPKTP+KSA L V L+AAQCEEC KWRLISTQEEYEDIRSK+IEEPFTC RKTDTSC++PPDIDY+ TRTW IDKPNIPKTP GF RRLVLRKNF
Subjt:  MAAARPPKTPMKSAGLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNF

Query:  SKLDASYITPTGKRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAKKLKKTKDESVHTD
        SK DA Y+TPTGK VRSS EM A+VEANP+YKDIPLSSFSFAVPKV+EETVPESILKE LNSSSAK++KKTKDES HT+
Subjt:  SKLDASYITPTGKRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAKKLKKTKDESVHTD

TrEMBL top hitse value%identityAlignment
A0A0A0K900 Uncharacterized protein1.1e-7480.34Show/hide
Query:  AAARPPKTPMKSAGLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFS
        AA RPPKTP KS  L V L+AAQCEEC KWRLISTQEEYE IRSK+IEEPFTC RKTDTSCEDPPDIDY+ TRTW IDKPNIPKTP+GF RRLVLRKNF+
Subjt:  AAARPPKTPMKSAGLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFS

Query:  KLDASYITPTGKRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAKKLKKTKDESVHTD
        K DA Y+TPTGK VRSS E+ A+VEANPQYKDI LS+FSFAVPK++EETVPESILKE LNSSSAK++KKTK+ES HT+
Subjt:  KLDASYITPTGKRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAKKLKKTKDESVHTD

A0A1S3BRE2 methyl-CpG-binding domain-containing protein 46.2e-7377.53Show/hide
Query:  AAARPPKTPMKSAGLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFS
        AAARPPKTP+KS  + V L+A QCEEC KWRLISTQEEYEDIRS++IEEPFTC RKTDTSCEDPPDI+Y+ TRTW IDKPNIPKTP+GF RRLVLRKNF+
Subjt:  AAARPPKTPMKSAGLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFS

Query:  KLDASYITPTGKRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAKKLKKTKDESVHTD
        K DA Y+TPTGK VRS  E+ A+V+ANPQYKDI LS+FSFAVPK++EETVPESILKE LNSSSAK++KKTK+ES +T+
Subjt:  KLDASYITPTGKRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAKKLKKTKDESVHTD

A0A5A7UVI7 Methyl-CpG-binding domain-containing protein 41.2e-7378.09Show/hide
Query:  AAARPPKTPMKSAGLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFS
        AAARPPKTP+KS  + V L+AAQCEEC KWRLISTQEEYEDIRS++IEEPFTC R+TDTSCEDPPDI+Y+ TRTW IDKPNIPKTP+GF RRLVLRKNF+
Subjt:  AAARPPKTPMKSAGLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFS

Query:  KLDASYITPTGKRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAKKLKKTKDESVHTD
        K DA Y+TPTGK VRS  E+ A+V+ANPQYKDI LS+FSFAVPK++EETVPESILKE LNSSSAK++KKTK+ES HT+
Subjt:  KLDASYITPTGKRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAKKLKKTKDESVHTD

A0A6J1D952 methyl-CpG-binding domain-containing protein 4-like1.7e-7580.45Show/hide
Query:  MAAARPPKTPMKSAGLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNF
        MA ARPP+ P+KS  L VDLYAAQCEEC KWRLISTQEEYEDIRSK+IEEPFTC RKTDTSCED  DIDY+ TRTWVIDKPNIPKTP+GFKRRLVLRK+F
Subjt:  MAAARPPKTPMKSAGLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNF

Query:  SKLDASYITPTGKRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAKKLKKTKDESVHTD
        SK DA YITPTGK VRSS EM +++EANP+YKDIPLS FSFAVPKV+EETVPESIL+E L+SSSAK++KK KD+S HTD
Subjt:  SKLDASYITPTGKRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAKKLKKTKDESVHTD

A0A6J1H964 methyl-CpG-binding domain-containing protein 4-like isoform X21.4e-7280Show/hide
Query:  MAAARPPK-TPMKSAGLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKN
        MAA +PPK TP K+ GL V LYAAQCEEC KWRLIS+QEEYEDIRS++IEEPFTC RKTDTSCEDPPDIDY+ TRTWVIDKPN+PKTPKGFKRRLVLR+N
Subjt:  MAAARPPK-TPMKSAGLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKN

Query:  FSKLDASYITPTGKRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAKKLKKTKDESVHTD
        FSKLDA Y+TPTGK VRSS +M A+VEANPQYKDIPLS FSFAVPKV+EETVPESILK     SS K+ KKTKDESV  D
Subjt:  FSKLDASYITPTGKRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAKKLKKTKDESVHTD

SwissProt top hitse value%identityAlignment
Q4PSK1 Methyl-CpG-binding domain-containing protein 33.1e-2138.92Show/hide
Query:  VDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYN---PTRTWVIDKPNIPKTPKGFKRRLVLRKNFSKLDASY--ITPTG
        +D YAAQC +C K R I +QE+YE+IRSK +E+ F C R     CE+P D+  N    T  W  D+ +IPKTP+G KR LV+R N  K+D  Y  + P  
Subjt:  VDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYN---PTRTWVIDKPNIPKTPKGFKRRLVLRKNFSKLDASY--ITPTG

Query:  KRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAKKLKKTKDESVHTD
        KR +S  E+  ++E   ++KD+ L   SFA PK ++      + K+ ++S S+   + T+++ V  D
Subjt:  KRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAKKLKKTKDESVHTD

Q5XEN5 Methyl-CpG-binding domain-containing protein 11.1e-4555.92Show/hide
Query:  GLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFSKLDASYITPTGKR
        G  +D++A QCE+C KWR I TQ+EYEDIRS+V E+PF C  K   SCED  D++Y+ +RTWVIDKP +P+TP+GFKR L+LRK++SK+DA YITPTGK+
Subjt:  GLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFSKLDASYITPTGKR

Query:  VRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAK
        ++S  E+ A+++AN  YK   L  F+F VPKV+EETVP  IL +     S K
Subjt:  VRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAK

Q8LA53 Methyl-CpG-binding domain-containing protein 25.1e-2439.29Show/hide
Query:  VDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCR----KTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFSK--LDASYITPT
        +  +  QC  C KWRL+ + ++YE+IR +++E PF C      K D SC+ P DI  + TR W IDKPNI + P G++R L +R        D  Y+ P+
Subjt:  VDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCR----KTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFSK--LDASYITPT

Query:  GKRVRSSIEMQAYVEANPQY--KDIPLSSFSFAVPKVIEE
        GK++RS++E+Q Y+  N +Y  + + LS FSF +PK +++
Subjt:  GKRVRSSIEMQAYVEANPQY--KDIPLSSFSFAVPKVIEE

Q9FZP6 Putative methyl-CpG-binding domain protein 121.1e-1330.82Show/hide
Query:  QCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKT----DTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFSKL-DASYITPTGKRVRSS
        QC +C KWRLI + + Y  I+   ++ PF C   +    + SC  P   D     TW    P+IP  P G+ R + +R   +K  D  Y  P+G+R+RSS
Subjt:  QCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKT----DTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFSKL-DASYITPTGKRVRSS

Query:  IEMQAYVEANPQY--KDIPLSSFSFAVPKVIEETVPESILKESLNSSSAKKLKKTKDES
         E+Q++++ +P+Y  + +  S FSF +PK +++   +        +   K+ K +KD +
Subjt:  IEMQAYVEANPQY--KDIPLSSFSFAVPKVIEETVPESILKESLNSSSAKKLKKTKDES

Q9LYB9 Methyl-CpG-binding domain-containing protein 49.2e-5059.73Show/hide
Query:  ARPPKTPMKSAGLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFSKL
        A+P      + G  +D YAAQC+ C KWR+I +QEEYEDIRSK++E+PF C +K   SCE+P DIDY+ +RTWVIDKP +PKTPKGFKR LVLRK++SK+
Subjt:  ARPPKTPMKSAGLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFSKL

Query:  DASYITPTGKRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVP
        D  Y TPTGK++RS  E+ A+VEANP++++ PL  F+F VPKV+E+TVP
Subjt:  DASYITPTGKRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVP

Arabidopsis top hitse value%identityAlignment
AT3G63030.1 methyl-CPG-binding domain 46.6e-5159.73Show/hide
Query:  ARPPKTPMKSAGLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFSKL
        A+P      + G  +D YAAQC+ C KWR+I +QEEYEDIRSK++E+PF C +K   SCE+P DIDY+ +RTWVIDKP +PKTPKGFKR LVLRK++SK+
Subjt:  ARPPKTPMKSAGLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFSKL

Query:  DASYITPTGKRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVP
        D  Y TPTGK++RS  E+ A+VEANP++++ PL  F+F VPKV+E+TVP
Subjt:  DASYITPTGKRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVP

AT4G22745.1 methyl-CPG-binding domain 17.5e-4755.92Show/hide
Query:  GLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFSKLDASYITPTGKR
        G  +D++A QCE+C KWR I TQ+EYEDIRS+V E+PF C  K   SCED  D++Y+ +RTWVIDKP +P+TP+GFKR L+LRK++SK+DA YITPTGK+
Subjt:  GLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFSKLDASYITPTGKR

Query:  VRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAK
        ++S  E+ A+++AN  YK   L  F+F VPKV+EETVP  IL +     S K
Subjt:  VRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAK

AT5G35330.1 methyl-CPG-binding domain protein 023.6e-2539.29Show/hide
Query:  VDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCR----KTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFSK--LDASYITPT
        +  +  QC  C KWRL+ + ++YE+IR +++E PF C      K D SC+ P DI  + TR W IDKPNI + P G++R L +R        D  Y+ P+
Subjt:  VDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCR----KTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFSK--LDASYITPT

Query:  GKRVRSSIEMQAYVEANPQY--KDIPLSSFSFAVPKVIEE
        GK++RS++E+Q Y+  N +Y  + + LS FSF +PK +++
Subjt:  GKRVRSSIEMQAYVEANPQY--KDIPLSSFSFAVPKVIEE

AT5G35330.2 methyl-CPG-binding domain protein 023.6e-2539.29Show/hide
Query:  VDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCR----KTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFSK--LDASYITPT
        +  +  QC  C KWRL+ + ++YE+IR +++E PF C      K D SC+ P DI  + TR W IDKPNI + P G++R L +R        D  Y+ P+
Subjt:  VDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCR----KTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFSK--LDASYITPT

Query:  GKRVRSSIEMQAYVEANPQY--KDIPLSSFSFAVPKVIEE
        GK++RS++E+Q Y+  N +Y  + + LS FSF +PK +++
Subjt:  GKRVRSSIEMQAYVEANPQY--KDIPLSSFSFAVPKVIEE

AT5G35330.3 methyl-CPG-binding domain protein 023.6e-2539.29Show/hide
Query:  VDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCR----KTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFSK--LDASYITPT
        +  +  QC  C KWRL+ + ++YE+IR +++E PF C      K D SC+ P DI  + TR W IDKPNI + P G++R L +R        D  Y+ P+
Subjt:  VDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCR----KTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFSK--LDASYITPT

Query:  GKRVRSSIEMQAYVEANPQY--KDIPLSSFSFAVPKVIEE
        GK++RS++E+Q Y+  N +Y  + + LS FSF +PK +++
Subjt:  GKRVRSSIEMQAYVEANPQY--KDIPLSSFSFAVPKVIEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGCCAGACCTCCCAAAACGCCGATGAAGTCAGCAGGGCTGGGAGTAGATCTGTATGCTGCCCAGTGTGAGGAATGCTCCAAATGGAGGTTGATAAGTACTCA
AGAGGAGTACGAGGATATTAGAAGCAAAGTGATAGAAGAACCCTTTACTTGCTGTAGGAAAACCGATACTTCTTGCGAGGATCCTCCAGATATCGACTACAATCCAACTC
GAACTTGGGTCATTGACAAACCTAACATCCCAAAGACCCCAAAAGGCTTCAAGAGACGTTTGGTGCTGAGAAAAAATTTCTCTAAATTAGATGCTTCCTATATCACACCC
ACAGGGAAGAGGGTGAGATCCTCTATAGAGATGCAAGCCTATGTAGAAGCAAATCCACAATACAAGGATATACCTCTTTCAAGCTTCAGTTTTGCAGTCCCAAAAGTAAT
TGAAGAGACTGTGCCTGAAAGCATCTTGAAAGAGAGCCTAAATAGCAGTAGTGCCAAAAAACTTAAGAAGACAAAGGATGAATCTGTCCATACTGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCGCCAGACCTCCCAAAACGCCGATGAAGTCAGCAGGGCTGGGAGTAGATCTGTATGCTGCCCAGTGTGAGGAATGCTCCAAATGGAGGTTGATAAGTACTCA
AGAGGAGTACGAGGATATTAGAAGCAAAGTGATAGAAGAACCCTTTACTTGCTGTAGGAAAACCGATACTTCTTGCGAGGATCCTCCAGATATCGACTACAATCCAACTC
GAACTTGGGTCATTGACAAACCTAACATCCCAAAGACCCCAAAAGGCTTCAAGAGACGTTTGGTGCTGAGAAAAAATTTCTCTAAATTAGATGCTTCCTATATCACACCC
ACAGGGAAGAGGGTGAGATCCTCTATAGAGATGCAAGCCTATGTAGAAGCAAATCCACAATACAAGGATATACCTCTTTCAAGCTTCAGTTTTGCAGTCCCAAAAGTAAT
TGAAGAGACTGTGCCTGAAAGCATCTTGAAAGAGAGCCTAAATAGCAGTAGTGCCAAAAAACTTAAGAAGACAAAGGATGAATCTGTCCATACTGACTGA
Protein sequenceShow/hide protein sequence
MAAARPPKTPMKSAGLGVDLYAAQCEECSKWRLISTQEEYEDIRSKVIEEPFTCCRKTDTSCEDPPDIDYNPTRTWVIDKPNIPKTPKGFKRRLVLRKNFSKLDASYITP
TGKRVRSSIEMQAYVEANPQYKDIPLSSFSFAVPKVIEETVPESILKESLNSSSAKKLKKTKDESVHTD