; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg014186 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg014186
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold3:39422017..39426333
RNA-Seq ExpressionSpg014186
SyntenySpg014186
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]2.6e-2248.51Show/hide
Query:  QKYMSAEELLKSKKSEREHKRSSSSDHDSRKDKKQRTDEGGRGRPDRAHPFGKFEKYTPTAIPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHR
        Q+YMSA E   SK+     +     +    K +  R ++  R R  +  P  KFEKYT T +P EQVLMEI+N  LLK+P RM +S  +R K +YCLFH 
Subjt:  QKYMSAEELLKSKKSEREHKRSSSSDHDSRKDKKQRTDEGGRGRPDRAHPFGKFEKYTPTAIPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHR

Query:  DHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA
        DHGH+T++C  LK+E+E LI  GYLKE+V EPKA
Subjt:  DHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA

XP_022155873.1 uncharacterized protein LOC111022886 [Momordica charantia]2.0e-1960.76Show/hide
Query:  KYTPTAIPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA
        K TPT +  EQVLMEI++  LLK+P RMK+ P +R K QY LFHRDHGH+T++C  LK+E+E LI++GYLKE+V +PKA
Subjt:  KYTPTAIPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.2e-2452.99Show/hide
Query:  QKYMSAEELLKSKKSEREHKRSSSSDHDSRKDKKQRTDEGGRGRPDRAHPFGKFEKYTPTAIPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHR
        Q+YMSA E   SK+ E + KR+     +   DK Q +    R R  +  P  KFEKYTPT +P EQVLMEI++  LLK+P RMK+S  +R K +YCLFHR
Subjt:  QKYMSAEELLKSKKSEREHKRSSSSDHDSRKDKKQRTDEGGRGRPDRAHPFGKFEKYTPTAIPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHR

Query:  DHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA
        DHGH+T++C  LK+E+E LI+ GYLKE+V EPKA
Subjt:  DHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]5.2e-2348.57Show/hide
Query:  QKYMSAEEL------LKSKKSEREHKRSSSSDHDSRKDKKQRTDEGGRGRPDRAHPFGKFEKYTPTAIPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQ
        QKYMSAEE       L+ K+++++ +RS      S+ +K+ R   G +  P       KFEKYTPT +P EQVLMEI++  LLK+P  MK+ P++R K +
Subjt:  QKYMSAEEL------LKSKKSEREHKRSSSSDHDSRKDKKQRTDEGGRGRPDRAHPFGKFEKYTPTAIPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQ

Query:  YCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA
        YCLFHRDHGH+T +C  LK+E+E LI+ GYLKE+V + KA
Subjt:  YCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]1.3e-2150Show/hide
Query:  QKYMSAEELLKSKKSEREHKRSSSSDHDSRKDKKQRTDEGGRGRPDRAHPFGKFEKYTPTAIPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHR
        Q+YMSA E   SK+ E + KR+     +   DK Q +    R R  +  P  KFEKYTPT +P EQVLMEI++  LLK+P RMK    +R K +YCLFHR
Subjt:  QKYMSAEELLKSKKSEREHKRSSSSDHDSRKDKKQRTDEGGRGRPDRAHPFGKFEKYTPTAIPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHR

Query:  DHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA
        DH H+T++   LK+E+E LI+ GYL+E+V EPKA
Subjt:  DHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128051.3e-2248.51Show/hide
Query:  QKYMSAEELLKSKKSEREHKRSSSSDHDSRKDKKQRTDEGGRGRPDRAHPFGKFEKYTPTAIPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHR
        Q+YMSA E   SK+     +     +    K +  R ++  R R  +  P  KFEKYT T +P EQVLMEI+N  LLK+P RM +S  +R K +YCLFH 
Subjt:  QKYMSAEELLKSKKSEREHKRSSSSDHDSRKDKKQRTDEGGRGRPDRAHPFGKFEKYTPTAIPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHR

Query:  DHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA
        DHGH+T++C  LK+E+E LI  GYLKE+V EPKA
Subjt:  DHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA

A0A6J1DP33 uncharacterized protein LOC1110228869.9e-2060.76Show/hide
Query:  KYTPTAIPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA
        K TPT +  EQVLMEI++  LLK+P RMK+ P +R K QY LFHRDHGH+T++C  LK+E+E LI++GYLKE+V +PKA
Subjt:  KYTPTAIPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA

A0A6J1DWY0 uncharacterized protein LOC1110252936.0e-2552.99Show/hide
Query:  QKYMSAEELLKSKKSEREHKRSSSSDHDSRKDKKQRTDEGGRGRPDRAHPFGKFEKYTPTAIPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHR
        Q+YMSA E   SK+ E + KR+     +   DK Q +    R R  +  P  KFEKYTPT +P EQVLMEI++  LLK+P RMK+S  +R K +YCLFHR
Subjt:  QKYMSAEELLKSKKSEREHKRSSSSDHDSRKDKKQRTDEGGRGRPDRAHPFGKFEKYTPTAIPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHR

Query:  DHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA
        DHGH+T++C  LK+E+E LI+ GYLKE+V EPKA
Subjt:  DHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA

A0A6J1DYL6 uncharacterized protein LOC1110257856.2e-2250Show/hide
Query:  QKYMSAEELLKSKKSEREHKRSSSSDHDSRKDKKQRTDEGGRGRPDRAHPFGKFEKYTPTAIPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHR
        Q+YMSA E   SK+ E + KR+     +   DK Q +    R R  +  P  KFEKYTPT +P EQVLMEI++  LLK+P RMK    +R K +YCLFHR
Subjt:  QKYMSAEELLKSKKSEREHKRSSSSDHDSRKDKKQRTDEGGRGRPDRAHPFGKFEKYTPTAIPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHR

Query:  DHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA
        DH H+T++   LK+E+E LI+ GYL+E+V EPKA
Subjt:  DHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA

A0A6J1DZ52 uncharacterized protein LOC1110256122.5e-2348.57Show/hide
Query:  QKYMSAEEL------LKSKKSEREHKRSSSSDHDSRKDKKQRTDEGGRGRPDRAHPFGKFEKYTPTAIPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQ
        QKYMSAEE       L+ K+++++ +RS      S+ +K+ R   G +  P       KFEKYTPT +P EQVLMEI++  LLK+P  MK+ P++R K +
Subjt:  QKYMSAEEL------LKSKKSEREHKRSSSSDHDSRKDKKQRTDEGGRGRPDRAHPFGKFEKYTPTAIPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQ

Query:  YCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA
        YCLFHRDHGH+T +C  LK+E+E LI+ GYLKE+V + KA
Subjt:  YCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGCCTTCTCTTTCCACCCACTTTGACTTAATCAACTCTTCAGCATTTATGTACCTATGTGCCCTAGAGATGAATTCTGCATACGTACACGGCTGGTTTTCTCCAATGGA
ATTCAACAATTTCTCATCCTGCAAACCCGTTCAAGCTTTCCTCGGGTCTCTGCTTAATGCTCTTCAACGGGACTTTTTCGCTGATTTGTTCTCCAAAGATGATCCTGATC
CCTCGTGGGGTTTCGTCCTGACTTCGGCCTCGGCCTCGACCTCGGGTCGTCACTGTTCGTCTTGGGGAAGACGTGGCCTGCAAAGCAAAGGAAACCTGCACACCGGTGTG
GTGCTTGCCACACCGCCTCCGATGCTTAAGTCAGTAATCGAAGGGAATATGAGCAAAACCAGAGAGCTAGAGGAAGAGAAGAGAGAGTTTTTGGATCCCTTCTCCAAGGT
TGAAGAAGGTATTAAGAAGCTGGTGAGTACTGTTATAGGCAATTTTGGACCGCCCGACGCACAAGGAGCTGACGAGGACGTCCGGGCAAAAATAGGGCTAGGAGTCCGAC
CCAGAGGAAGAACCGACCAAAGGGCCGGGCCAACTTGGCCCGACCCATATGGTTGGCCTTGGCCCAAGGCAGAGGCCGACCATTCGGCCCGCTTGCGCGGGCCGAGCTCG
GTCATCTCCTCTCGGTCCCCAATGCCGCTAGCCGCCTCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGTTGGCGCCGT
CTGTGGGGAAGAAAGCTTGCCAAATCTGCATATCGGTCATTCCATGAGTAAAGGGATGGAGAAGAGAATTCAAGACATAAACACAGAAAATTCGGATGGTGACCGCCACC
AGCGGAGGTCACGGGAAGAAGGCCGAGAACGGCCTCAGACCGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAGCTGATCTAAAATTTACTGCT
CTCGAAAACAAAGTAAGTGCGATGGATCATAATTTGTCCAGGATACTTCGTATCTTGGATAAATCTGGTCCTAGCACTAAAACCCCTGATGAGAGGTTGGTTAGGGATCC
AAGGAAGGGGAAGGAGCCAATCGAGTACATTGCAGAATCGGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGATCAGGGGGCTCAAGCCTACTGATC
GTACAATTTTGAGGAGTCTAGAGTCAAGCACACTTAGGGGACGTGACTACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAG
AAGCGCAGAAGTGCCAAAACTGCCGAATCCGAGGCCAGAGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAAGAAAGACAA
TCTCCCCTGGAAGACCGAGCTTCTGAACGCACTGAAGGAGCTCGGAAATCCTCAGGGAGACCTGCAGAAATCAAGGGACCTCGGAGACCAAGACTTGGAAGAACTAGTCG
ATCAGAAATACATGAGCGCAGAAGAGTTGCTCAAGTCAAAGAAGTCAGAACGTGAACACAAGAGGTCTTCTTCATCTGACCACGACAGTAGGAAGGATAAAAAGCAGCGG
ACCGACGAGGGAGGCCGAGGCCGACCAGACCGAGCACATCCCTTTGGTAAATTCGAGAAATATACACCAACAGCTATTCCACAGGAGCAAGTATTAATGGAAATCCGAAA
TACGGGACTTCTGAAATTCCCAGGGAGAATGAAGTCAAGTCCCGATAGAAGAGACAAGAGCCAGTATTGCCTTTTCCACCGAGACCATGGACATTCAACCAGGAATTGTA
TTCAGTTGAAGGATGAAATCGAAGCATTGATCCAGAATGGGTATTTGAAGGAGTTCGTCGGCGAGCCCAAGGCCGAGGCCGACCAAAGATGA
mRNA sequenceShow/hide mRNA sequence
AAGCCTTCTCTTTCCACCCACTTTGACTTAATCAACTCTTCAGCATTTATGTACCTATGTGCCCTAGAGATGAATTCTGCATACGTACACGGCTGGTTTTCTCCAATGGA
ATTCAACAATTTCTCATCCTGCAAACCCGTTCAAGCTTTCCTCGGGTCTCTGCTTAATGCTCTTCAACGGGACTTTTTCGCTGATTTGTTCTCCAAAGATGATCCTGATC
CCTCGTGGGGTTTCGTCCTGACTTCGGCCTCGGCCTCGACCTCGGGTCGTCACTGTTCGTCTTGGGGAAGACGTGGCCTGCAAAGCAAAGGAAACCTGCACACCGGTGTG
GTGCTTGCCACACCGCCTCCGATGCTTAAGTCAGTAATCGAAGGGAATATGAGCAAAACCAGAGAGCTAGAGGAAGAGAAGAGAGAGTTTTTGGATCCCTTCTCCAAGGT
TGAAGAAGGTATTAAGAAGCTGGTGAGTACTGTTATAGGCAATTTTGGACCGCCCGACGCACAAGGAGCTGACGAGGACGTCCGGGCAAAAATAGGGCTAGGAGTCCGAC
CCAGAGGAAGAACCGACCAAAGGGCCGGGCCAACTTGGCCCGACCCATATGGTTGGCCTTGGCCCAAGGCAGAGGCCGACCATTCGGCCCGCTTGCGCGGGCCGAGCTCG
GTCATCTCCTCTCGGTCCCCAATGCCGCTAGCCGCCTCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGTTGGCGCCGT
CTGTGGGGAAGAAAGCTTGCCAAATCTGCATATCGGTCATTCCATGAGTAAAGGGATGGAGAAGAGAATTCAAGACATAAACACAGAAAATTCGGATGGTGACCGCCACC
AGCGGAGGTCACGGGAAGAAGGCCGAGAACGGCCTCAGACCGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAGCTGATCTAAAATTTACTGCT
CTCGAAAACAAAGTAAGTGCGATGGATCATAATTTGTCCAGGATACTTCGTATCTTGGATAAATCTGGTCCTAGCACTAAAACCCCTGATGAGAGGTTGGTTAGGGATCC
AAGGAAGGGGAAGGAGCCAATCGAGTACATTGCAGAATCGGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGATCAGGGGGCTCAAGCCTACTGATC
GTACAATTTTGAGGAGTCTAGAGTCAAGCACACTTAGGGGACGTGACTACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAG
AAGCGCAGAAGTGCCAAAACTGCCGAATCCGAGGCCAGAGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAAGAAAGACAA
TCTCCCCTGGAAGACCGAGCTTCTGAACGCACTGAAGGAGCTCGGAAATCCTCAGGGAGACCTGCAGAAATCAAGGGACCTCGGAGACCAAGACTTGGAAGAACTAGTCG
ATCAGAAATACATGAGCGCAGAAGAGTTGCTCAAGTCAAAGAAGTCAGAACGTGAACACAAGAGGTCTTCTTCATCTGACCACGACAGTAGGAAGGATAAAAAGCAGCGG
ACCGACGAGGGAGGCCGAGGCCGACCAGACCGAGCACATCCCTTTGGTAAATTCGAGAAATATACACCAACAGCTATTCCACAGGAGCAAGTATTAATGGAAATCCGAAA
TACGGGACTTCTGAAATTCCCAGGGAGAATGAAGTCAAGTCCCGATAGAAGAGACAAGAGCCAGTATTGCCTTTTCCACCGAGACCATGGACATTCAACCAGGAATTGTA
TTCAGTTGAAGGATGAAATCGAAGCATTGATCCAGAATGGGTATTTGAAGGAGTTCGTCGGCGAGCCCAAGGCCGAGGCCGACCAAAGATGA
Protein sequenceShow/hide protein sequence
KPSLSTHFDLINSSAFMYLCALEMNSAYVHGWFSPMEFNNFSSCKPVQAFLGSLLNALQRDFFADLFSKDDPDPSWGFVLTSASASTSGRHCSSWGRRGLQSKGNLHTGV
VLATPPPMLKSVIEGNMSKTRELEEEKREFLDPFSKVEEGIKKLVSTVIGNFGPPDAQGADEDVRAKIGLGVRPRGRTDQRAGPTWPDPYGWPWPKAEADHSARLRGPSS
VISSRSPMPLAASVSPGLSRNASEFLKTLGARAVGAVCGEESLPNLHIGHSMSKGMEKRIQDINTENSDGDRHQRRSREEGRERPQTESPRPRSPLPSSREKQADLKFTA
LENKVSAMDHNLSRILRILDKSGPSTKTPDERLVRDPRKGKEPIEYIAESETRSKGKKTSSMTSKIRGLKPTDRTILRSLESSTLRGRDYTVSTPSYGHTKTDLRNLIEE
KRRSAKTAESEARAAEAEARAAEAEARAAEAEAKKDNLPWKTELLNALKELGNPQGDLQKSRDLGDQDLEELVDQKYMSAEELLKSKKSEREHKRSSSSDHDSRKDKKQR
TDEGGRGRPDRAHPFGKFEKYTPTAIPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQR