; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg014201 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg014201
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCold regulated protein 27, putative isoform 2
Genome locationscaffold3:36226655..36231206
RNA-Seq ExpressionSpg014201
SyntenySpg014201
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022450.1 hypothetical protein SDJN02_16181, partial [Cucurbita argyrosperma subsp. argyrosperma]9.2e-9771.8Show/hide
Query:  MGDHL------PSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKDLPAHRCLELDAVKLRLFCLLFVHTHWTDEKHRSYLDSLEASFVQELHQ
        MGDHL      PSS+SPPV DRQPPS +SAS LT LNS+SYSSS T+D FKD P+HRCL+LDAV+          THWTDEKHRSYL SLEASFVQELHQ
Subjt:  MGDHL------PSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKDLPAHRCLELDAVKLRLFCLLFVHTHWTDEKHRSYLDSLEASFVQELHQ

Query:  YRHLHALSSKQKMRRKPIMHNISTSELMVLQDASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCG
        YR L ALSSKQKMR +P M +IS+SELMVLQDASWQKANIG NDPLL+R ADSPAIL+DVWIN FPSAGK C  ++PDLLEE G+ SD RHLRNTK+S  
Subjt:  YRHLHALSSKQKMRRKPIMHNISTSELMVLQDASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCG

Query:  SARSSQQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSDNQVVSYKNKRL
        SARSSQQIPPCCR+SY +ITEVSDQNFVDN  GE+S GM  AKRLKK +SDS +++QVV YK   L
Subjt:  SARSSQQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSDNQVVSYKNKRL

XP_022952080.1 uncharacterized protein LOC111454842 isoform X1 [Cucurbita moschata]8.1e-9369.96Show/hide
Query:  HLPSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVKLRLFCLLFVHTHWTDEKHRSYLDSLEASFVQELHQYRHLH
        H PSS+SPPVADR+ P + SAS LTRLNSESYSSS T+D  +     +P+H C +LDAV+          THWT+EKHR +LDSLEASFVQ+LH+YRHL 
Subjt:  HLPSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVKLRLFCLLFVHTHWTDEKHRSYLDSLEASFVQELHQYRHLH

Query:  ALSSKQKMRRKPIMHNISTSELMVLQDASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCGSARSS
        ALSSKQKMRRKPIM NIS+SE MVLQDASWQKAN+G  DPLLD+TADSPAILEDVWINHFPSAG QC L++ D+LEECG+CSDR H+RN  +S  SARSS
Subjt:  ALSSKQKMRRKPIMHNISTSELMVLQDASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCGSARSS

Query:  QQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSDNQV
        QQIPPCCRDS+ ++TEVSDQNFVD H GELSDG  I KRLKK +SDS  +N+V
Subjt:  QQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSDNQV

XP_022952081.1 uncharacterized protein LOC111454842 isoform X2 [Cucurbita moschata]1.7e-9569.81Show/hide
Query:  HLPSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVKLRLFCLLFVHTHWTDEKHRSYLDSLEASFVQELHQYRHLH
        H PSS+SPPVADR+ P + SAS LTRLNSESYSSS T+D  +     +P+H C +LDAV+          THWT+EKHR +LDSLEASFVQ+LH+YRHL 
Subjt:  HLPSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVKLRLFCLLFVHTHWTDEKHRSYLDSLEASFVQELHQYRHLH

Query:  ALSSKQKMRRKPIMHNISTSELMVLQDASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCGSARSS
        ALSSKQKMRRKPIM NIS+SE MVLQDASWQKAN+G  DPLLD+TADSPAILEDVWINHFPSAG QC L++ D+LEECG+CSDR H+RN  +S  SARSS
Subjt:  ALSSKQKMRRKPIMHNISTSELMVLQDASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCGSARSS

Query:  QQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSDNQVVSYKNKRLSSER
        QQIPPCCRDS+ ++TEVSDQNFVD H GELSDG  I KRLKK +SDS  +N+V  Y  KRLSSER
Subjt:  QQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSDNQVVSYKNKRLSSER

XP_023529516.1 uncharacterized protein LOC111792349 isoform X1 [Cucurbita pepo subsp. pepo]2.9e-9872.18Show/hide
Query:  MGDHL------PSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKDLPAHRCLELDAVKLRLFCLLFVHTHWTDEKHRSYLDSLEASFVQELHQ
        MGDHL      PSS+SPPV DRQPPS +SAS LT LNS+SYSSS+T+D FKD P+HRCL+LDAV+          THWTDEKHRSYL SLEASFVQELHQ
Subjt:  MGDHL------PSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKDLPAHRCLELDAVKLRLFCLLFVHTHWTDEKHRSYLDSLEASFVQELHQ

Query:  YRHLHALSSKQKMRRKPIMHNISTSELMVLQDASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCG
        YR L ALSSKQKMR +P M +IS+SELMVLQDASWQKANIG NDPLL+R AD PAIL+DVWIN FPSAGKQC  ++PDLLEE G+ SDRRHLRNTK+S  
Subjt:  YRHLHALSSKQKMRRKPIMHNISTSELMVLQDASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCG

Query:  SARSSQQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSDNQVVSYKNKRL
        SARSSQQ+PPCCR+SY +ITEVSDQNFVDNH GE+S GM  AKRLKK +SDS +++QVV YK   L
Subjt:  SARSSQQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSDNQVVSYKNKRL

XP_023553839.1 uncharacterized protein LOC111811294 isoform X2 [Cucurbita pepo subsp. pepo]6.2e-9368.68Show/hide
Query:  HLPSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVKLRLFCLLFVHTHWTDEKHRSYLDSLEASFVQELHQYRHLH
        H PSS+SPPVADR+ P + SAS LTRLNSESYSSS T+D  +     +P+H C +LDAV+          THWTDEKHR +LDSLEASFVQ+LH+YRHL 
Subjt:  HLPSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVKLRLFCLLFVHTHWTDEKHRSYLDSLEASFVQELHQYRHLH

Query:  ALSSKQKMRRKPIMHNISTSELMVLQDASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCGSARSS
        A SSKQK+RRK IM NIS+SE +VLQDASWQKANIG  DPLL +TADSPAILEDVWINHFPSAGK C L++ D+LEECG+CSDRRH+RN  +SC SARSS
Subjt:  ALSSKQKMRRKPIMHNISTSELMVLQDASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCGSARSS

Query:  QQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSDNQVVSYKNKRLSSER
        QQIP CCRDS+ + TEVSDQNFVD H GELSDG  I KRLKK +SDS  +++V  Y  KRLSSER
Subjt:  QQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSDNQVVSYKNKRLSSER

TrEMBL top hitse value%identityAlignment
A0A1S3BZU8 uncharacterized protein LOC103495241 isoform X13.6e-9170Show/hide
Query:  MGD-HLPSSVSPPVADRQP--PSAASASYLTRLNSESYSSSITLDGFKD-LPAHRCLELDAVKLRLFCLLFVHTHWTDEKHRSYLDSLEASFVQELHQYR
        MGD H PS VS P+ADRQ   P A+S +  T  NSES+SSSIT+DG K  L +H CL+LDA +          THWTDEKHRSYLDSLEASFVQ LHQ+R
Subjt:  MGD-HLPSSVSPPVADRQP--PSAASASYLTRLNSESYSSSITLDGFKD-LPAHRCLELDAVKLRLFCLLFVHTHWTDEKHRSYLDSLEASFVQELHQYR

Query:  HLHALSSKQKMRRKPIMHNISTSELMVLQDASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCGSA
         +HALSSKQKMRRKPIM + S+SELMVLQDASWQKANIG NDPLLD+TADSPAILED+WINHFPSAGKQC+L++PDLLEECG+CSDRRH+R+  +SCGSA
Subjt:  HLHALSSKQKMRRKPIMHNISTSELMVLQDASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCGSA

Query:  RSSQQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSDNQVVSYK
        R+SQQ  PCC +SY +ITEVSDQNFVDN  GELS GM  AKRLKK +S  L + QVV +K
Subjt:  RSSQQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSDNQVVSYK

A0A5D3C4A3 Cold regulated protein 27, putative isoform 22.0e-8970.2Show/hide
Query:  MGD-HLPSSVSPPVADRQP--PSAASASYLTRLNSESYSSSITLDGFKD-LPAHRCLELDAVKLRLFCLLFVHTHWTDEKHRSYLDSLEASFVQELHQYR
        MGD H PS VS P+ADRQ   P A+S +  T  NSES+SSSIT+DG K  L +H CL+LDA +          THWTDEKHRSYLDSLEASFVQ LHQ+R
Subjt:  MGD-HLPSSVSPPVADRQP--PSAASASYLTRLNSESYSSSITLDGFKD-LPAHRCLELDAVKLRLFCLLFVHTHWTDEKHRSYLDSLEASFVQELHQYR

Query:  HLHALSSKQKMRRKPIMHNISTSELMVLQDASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCGSA
         +HALSSKQKMRRKPIM + S+SELMVLQDASWQKANIG NDPLLD+TADSPAILED+WINHFPSAGKQC+L++PDLLEECG+CSDRRH+R+  +SCGSA
Subjt:  HLHALSSKQKMRRKPIMHNISTSELMVLQDASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCGSA

Query:  RSSQQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSDNQ
        R+SQQ  PCC +SY +ITEVSDQNFVDN  GELS GM  AKRLKK +S  L + Q
Subjt:  RSSQQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSDNQ

A0A6J1GJA3 uncharacterized protein LOC111454842 isoform X28.4e-9669.81Show/hide
Query:  HLPSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVKLRLFCLLFVHTHWTDEKHRSYLDSLEASFVQELHQYRHLH
        H PSS+SPPVADR+ P + SAS LTRLNSESYSSS T+D  +     +P+H C +LDAV+          THWT+EKHR +LDSLEASFVQ+LH+YRHL 
Subjt:  HLPSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVKLRLFCLLFVHTHWTDEKHRSYLDSLEASFVQELHQYRHLH

Query:  ALSSKQKMRRKPIMHNISTSELMVLQDASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCGSARSS
        ALSSKQKMRRKPIM NIS+SE MVLQDASWQKAN+G  DPLLD+TADSPAILEDVWINHFPSAG QC L++ D+LEECG+CSDR H+RN  +S  SARSS
Subjt:  ALSSKQKMRRKPIMHNISTSELMVLQDASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCGSARSS

Query:  QQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSDNQVVSYKNKRLSSER
        QQIPPCCRDS+ ++TEVSDQNFVD H GELSDG  I KRLKK +SDS  +N+V  Y  KRLSSER
Subjt:  QQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSDNQVVSYKNKRLSSER

A0A6J1GKR5 uncharacterized protein LOC111454842 isoform X13.9e-9369.96Show/hide
Query:  HLPSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVKLRLFCLLFVHTHWTDEKHRSYLDSLEASFVQELHQYRHLH
        H PSS+SPPVADR+ P + SAS LTRLNSESYSSS T+D  +     +P+H C +LDAV+          THWT+EKHR +LDSLEASFVQ+LH+YRHL 
Subjt:  HLPSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVKLRLFCLLFVHTHWTDEKHRSYLDSLEASFVQELHQYRHLH

Query:  ALSSKQKMRRKPIMHNISTSELMVLQDASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCGSARSS
        ALSSKQKMRRKPIM NIS+SE MVLQDASWQKAN+G  DPLLD+TADSPAILEDVWINHFPSAG QC L++ D+LEECG+CSDR H+RN  +S  SARSS
Subjt:  ALSSKQKMRRKPIMHNISTSELMVLQDASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCGSARSS

Query:  QQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSDNQV
        QQIPPCCRDS+ ++TEVSDQNFVD H GELSDG  I KRLKK +SDS  +N+V
Subjt:  QQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSDNQV

A0A6J1I9R8 uncharacterized protein LOC111470946 isoform X29.6e-9267.92Show/hide
Query:  HLPSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVKLRLFCLLFVHTHWTDEKHRSYLDSLEASFVQELHQYRHLH
        H PSS+SPPVADR+   + SAS LTRLNSESYSSS T+D  +     +P+H C +LDAV+          THWTDEKHR +LD+LEASFVQ+LH+YRHL 
Subjt:  HLPSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVKLRLFCLLFVHTHWTDEKHRSYLDSLEASFVQELHQYRHLH

Query:  ALSSKQKMRRKPIMHNISTSELMVLQDASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCGSARSS
        A SSKQKMRRKPIM NIS+SE MVLQDASWQKANIG  DPLL +TADSPAILEDVWINHFPSAG Q   ++ D+LEECG+CSDR H+RN  +SC SARSS
Subjt:  ALSSKQKMRRKPIMHNISTSELMVLQDASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCGSARSS

Query:  QQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSDNQVVSYKNKRLSSER
        QQIPPCCRDS+ ++ EVSDQNFVD H GELS G  I KRLKK +SDSL +++V  Y  KRLSSER
Subjt:  QQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSDNQVVSYKNKRLSSER

SwissProt top hitse value%identityAlignment
Q8L8T7 Cold-regulated protein 273.4e-0931.19Show/hide
Query:  FVHTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMR--------RKPIMHNISTSELMVLQDASWQKANIGMNDPLLD--RTADSPAILEDVWI
        ++ T WT+EKH  YL S+EASFV +L  Y  L AL   + +         RKP     S  +  VL D  WQK N+   +  ++     +S   L   WI
Subjt:  FVHTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMR--------RKPIMHNISTSELMVLQDASWQKANIGMNDPLLD--RTADSPAILEDVWI

Query:  NHF-PSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCGSARSSQQIPPCCRDSYAVI---TEVSDQNFVDNHSGELSDGMFIAKRLKKT-TSDSLSDNQ
         H+ P    Q  +      +   + + ++ +     S GSA S +Q+    RD   +     EVSDQNFV N   +  +G   +K++K    S+S S +Q
Subjt:  NHF-PSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCGSARSSQQIPPCCRDSYAVI---TEVSDQNFVDNHSGELSDGMFIAKRLKKT-TSDSLSDNQ

Query:  VV
        VV
Subjt:  VV

Q8L983 Cold-regulated protein 287.8e-0636.71Show/hide
Query:  THWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMRRKPIMHNI--STSELMVLQDASWQKANIGMNDPLLDRTAD
        T WT+EKH SYLD LE+SFV++L+    L    +++  R + +  N   S  +  VLQ+  WQK N G     L+ +++
Subjt:  THWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMRRKPIMHNI--STSELMVLQDASWQKANIGMNDPLLDRTAD

Arabidopsis top hitse value%identityAlignment
AT4G33980.1 BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2)5.5e-0736.71Show/hide
Query:  THWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMRRKPIMHNI--STSELMVLQDASWQKANIGMNDPLLDRTAD
        T WT+EKH SYLD LE+SFV++L+    L    +++  R + +  N   S  +  VLQ+  WQK N G     L+ +++
Subjt:  THWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMRRKPIMHNI--STSELMVLQDASWQKANIGMNDPLLDRTAD

AT4G33980.2 FUNCTIONS IN: molecular_function unknown5.5e-0736.71Show/hide
Query:  THWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMRRKPIMHNI--STSELMVLQDASWQKANIGMNDPLLDRTAD
        T WT+EKH SYLD LE+SFV++L+    L    +++  R + +  N   S  +  VLQ+  WQK N G     L+ +++
Subjt:  THWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMRRKPIMHNI--STSELMVLQDASWQKANIGMNDPLLDRTAD

AT5G42900.1 cold regulated gene 272.4e-1031.19Show/hide
Query:  FVHTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMR--------RKPIMHNISTSELMVLQDASWQKANIGMNDPLLD--RTADSPAILEDVWI
        ++ T WT+EKH  YL S+EASFV +L  Y  L AL   + +         RKP     S  +  VL D  WQK N+   +  ++     +S   L   WI
Subjt:  FVHTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMR--------RKPIMHNISTSELMVLQDASWQKANIGMNDPLLD--RTADSPAILEDVWI

Query:  NHF-PSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCGSARSSQQIPPCCRDSYAVI---TEVSDQNFVDNHSGELSDGMFIAKRLKKT-TSDSLSDNQ
         H+ P    Q  +      +   + + ++ +     S GSA S +Q+    RD   +     EVSDQNFV N   +  +G   +K++K    S+S S +Q
Subjt:  NHF-PSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCGSARSSQQIPPCCRDSYAVI---TEVSDQNFVDNHSGELSDGMFIAKRLKKT-TSDSLSDNQ

Query:  VV
        VV
Subjt:  VV

AT5G42900.2 cold regulated gene 272.4e-1031.19Show/hide
Query:  FVHTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMR--------RKPIMHNISTSELMVLQDASWQKANIGMNDPLLD--RTADSPAILEDVWI
        ++ T WT+EKH  YL S+EASFV +L  Y  L AL   + +         RKP     S  +  VL D  WQK N+   +  ++     +S   L   WI
Subjt:  FVHTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMR--------RKPIMHNISTSELMVLQDASWQKANIGMNDPLLD--RTADSPAILEDVWI

Query:  NHF-PSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCGSARSSQQIPPCCRDSYAVI---TEVSDQNFVDNHSGELSDGMFIAKRLKKT-TSDSLSDNQ
         H+ P    Q  +      +   + + ++ +     S GSA S +Q+    RD   +     EVSDQNFV N   +  +G   +K++K    S+S S +Q
Subjt:  NHF-PSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCGSARSSQQIPPCCRDSYAVI---TEVSDQNFVDNHSGELSDGMFIAKRLKKT-TSDSLSDNQ

Query:  VV
        VV
Subjt:  VV

AT5G42900.3 cold regulated gene 278.2e-1131.84Show/hide
Query:  FVHTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMR--------RKPIMHNISTSELMVLQDASWQKANIGMNDPLLD--RTADSPAILEDVWI
        ++ T WT+EKH  YL S+EASFV +L  Y  L AL   + +         RKP     S  +  VL D  WQK N+   +  ++     +S   L   WI
Subjt:  FVHTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMR--------RKPIMHNISTSELMVLQDASWQKANIGMNDPLLD--RTADSPAILEDVWI

Query:  NHF-PSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCGSARSSQQIPPCCR--DSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKT-TSDSLSDNQV
         H+ P    Q  +      +   + + ++ +     S GSA S +Q+    R  D  +V  EVSDQNFV N   +  +G   +K++K    S+S S +QV
Subjt:  NHF-PSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCGSARSSQQIPPCCR--DSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKT-TSDSLSDNQV

Query:  V
        V
Subjt:  V


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCACGCGCGAAAAAATATCTGGTGAGCGCGTGGAGAAACGGCGGCGATTTCCCCTTGTTTTTGATCCATCAATAATGGGAGACCATCTGCCGTCGTCCGTATCGCC
GCCGGTTGCTGATCGACAACCACCCTCGGCGGCCTCTGCTAGCTACTTGACTCGCTTGAACTCCGAATCCTACTCTTCTTCCATTACTCTTGACGGCTTCAAGGATTTGC
CTGCTCATCGTTGTCTGGAACTGGATGCGGTAAAATTGCGACTCTTCTGCCTTTTGTTTGTGCATACACATTGGACAGATGAGAAACACAGATCATATCTTGATTCTTTA
GAGGCATCTTTTGTCCAAGAGTTACATCAATATAGACACTTGCATGCTTTGTCCTCGAAACAGAAAATGCGTCGGAAGCCGATCATGCATAATATATCTACTTCAGAGTT
GATGGTCCTTCAAGATGCCTCCTGGCAGAAGGCTAACATTGGGATGAATGATCCTTTATTGGATAGGACTGCCGATTCTCCTGCTATTTTAGAGGATGTATGGATAAATC
ATTTTCCTTCTGCAGGAAAACAGTGTGCTCTGGATTCTCCTGATCTCCTTGAAGAATGTGGAACTTGTAGTGATAGGAGACACTTAAGAAACACGAAAAGCTCCTGTGGA
TCTGCCAGAAGTTCACAGCAGATCCCTCCATGCTGTCGTGATTCTTATGCAGTCATTACAGAAGTTTCAGATCAAAACTTTGTGGATAATCATTCAGGAGAGTTGTCTGA
TGGCATGTTTATTGCAAAAAGACTAAAGAAAACTACTTCTGATTCTTTGAGCGACAACCAGGTTGTATCATATAAGAATAAGAGATTATCATCAGAAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCACGCGCGAAAAAATATCTGGTGAGCGCGTGGAGAAACGGCGGCGATTTCCCCTTGTTTTTGATCCATCAATAATGGGAGACCATCTGCCGTCGTCCGTATCGCC
GCCGGTTGCTGATCGACAACCACCCTCGGCGGCCTCTGCTAGCTACTTGACTCGCTTGAACTCCGAATCCTACTCTTCTTCCATTACTCTTGACGGCTTCAAGGATTTGC
CTGCTCATCGTTGTCTGGAACTGGATGCGGTAAAATTGCGACTCTTCTGCCTTTTGTTTGTGCATACACATTGGACAGATGAGAAACACAGATCATATCTTGATTCTTTA
GAGGCATCTTTTGTCCAAGAGTTACATCAATATAGACACTTGCATGCTTTGTCCTCGAAACAGAAAATGCGTCGGAAGCCGATCATGCATAATATATCTACTTCAGAGTT
GATGGTCCTTCAAGATGCCTCCTGGCAGAAGGCTAACATTGGGATGAATGATCCTTTATTGGATAGGACTGCCGATTCTCCTGCTATTTTAGAGGATGTATGGATAAATC
ATTTTCCTTCTGCAGGAAAACAGTGTGCTCTGGATTCTCCTGATCTCCTTGAAGAATGTGGAACTTGTAGTGATAGGAGACACTTAAGAAACACGAAAAGCTCCTGTGGA
TCTGCCAGAAGTTCACAGCAGATCCCTCCATGCTGTCGTGATTCTTATGCAGTCATTACAGAAGTTTCAGATCAAAACTTTGTGGATAATCATTCAGGAGAGTTGTCTGA
TGGCATGTTTATTGCAAAAAGACTAAAGAAAACTACTTCTGATTCTTTGAGCGACAACCAGGTTGTATCATATAAGAATAAGAGATTATCATCAGAAAGATAA
Protein sequenceShow/hide protein sequence
MVTREKISGERVEKRRRFPLVFDPSIMGDHLPSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKDLPAHRCLELDAVKLRLFCLLFVHTHWTDEKHRSYLDSL
EASFVQELHQYRHLHALSSKQKMRRKPIMHNISTSELMVLQDASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCG
SARSSQQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSDNQVVSYKNKRLSSER