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Spg014220 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg014220
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtodermal factor 1 like
Genome locationscaffold3:42118419..42119299
RNA-Seq ExpressionSpg014220
SyntenySpg014220
Gene Ontology termsNA
InterPro domainsIPR039923 - Protodermal factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148954.1 uncharacterized protein LOC101220310 [Cucumis sativus]1.1e-6186.75Show/hide
Query:  METPRLLNLLLLLCFAAAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAA-AADEEEEAFGRVVKE
        M++ R LNLLLLLCFAAA AE AS RRPGFLFSRT GRCT QFWSS  EAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAA A DEEEE FGRVVKE
Subjt:  METPRLLNLLLLLCFAAAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAA-AADEEEEAFGRVVKE

Query:  ATAALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN
        ATAALLNSY RRR FPYSAWEVKTLFIKALVSKEAA LQSQRFA AN+ CN
Subjt:  ATAALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN

XP_022953859.1 uncharacterized protein LOC111456270 [Cucurbita moschata]3.7e-5783.23Show/hide
Query:  METPRLLNLLLLLCFA-AAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAA----DEEEEAFGR
        MET RLL+ LLLL FA AAA EAA +RRPGFLFSRTRGRCTP+FWSS REAWPRMAPESATVAKIFGSRAHERYGSEMTL+ AA  A    +EEEEAFGR
Subjt:  METPRLLNLLLLLCFA-AAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAA----DEEEEAFGR

Query:  VVKEATAALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN
        VVKEATAALLNSYA RR+FPY+AWEVKTL IKALVSKEAAALQSQRFA AN+ CN
Subjt:  VVKEATAALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN

XP_022991546.1 uncharacterized protein LOC111488125 [Cucurbita maxima]1.3e-5783.77Show/hide
Query:  METPRLLNLLLLLCFAAAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAA----DEEEEAFGRV
        MET RLL+ LLLL FAAAA EAA +RRPGFLFSRTRGRCTP+FWSS REAWPRMAPESATVAKIFGSRAHERYGSEMTL+ AA  A    +EEEEAFGRV
Subjt:  METPRLLNLLLLLCFAAAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAA----DEEEEAFGRV

Query:  VKEATAALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN
        VKEATAALLNSYA RR+FPY+AWEVKTL IKALVSKEAAALQSQRFA AN+ CN
Subjt:  VKEATAALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN

XP_023548905.1 uncharacterized protein LOC111807417 [Cucurbita pepo subsp. pepo]4.1e-5682.58Show/hide
Query:  METPRLLNLLLLLCFA-AAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAA----DEEEEAFGR
        MET RLL+ LLLL FA AAA EAA +R PGFLFSRTRGRCTP+FWSS REAWPRMAPESATVAKIFGSRAHERYGSEMTL+ AA  A    +EEEEAFGR
Subjt:  METPRLLNLLLLLCFA-AAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAA----DEEEEAFGR

Query:  VVKEATAALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN
        VVKEATAALLNSYA RR+FPYSAWEVKTL IKALVSKEAAALQS RFA AN+ CN
Subjt:  VVKEATAALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN

XP_038899192.1 uncharacterized protein LOC120086555 [Benincasa hispida]1.7e-6286.71Show/hide
Query:  METPRLLN-LLLLLCFA---AAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAA----AAADEEEEA
        M++ RL N LLLLLCFA   A AAEA STRRPGFLFSRTRGRCT QFWSSGREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAA    AAADEEEEA
Subjt:  METPRLLN-LLLLLCFA---AAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAA----AAADEEEEA

Query:  FGRVVKEATAALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN
        FGRVVKEAT ALLNSYARRREFPYSAWEVKTLFIKALVSKEAA LQS+RFA AN+ CN
Subjt:  FGRVVKEATAALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN

TrEMBL top hitse value%identityAlignment
A0A0A0K735 Uncharacterized protein5.4e-6286.75Show/hide
Query:  METPRLLNLLLLLCFAAAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAA-AADEEEEAFGRVVKE
        M++ R LNLLLLLCFAAA AE AS RRPGFLFSRT GRCT QFWSS  EAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAA A DEEEE FGRVVKE
Subjt:  METPRLLNLLLLLCFAAAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAA-AADEEEEAFGRVVKE

Query:  ATAALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN
        ATAALLNSY RRR FPYSAWEVKTLFIKALVSKEAA LQSQRFA AN+ CN
Subjt:  ATAALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN

A0A5A7UZL8 Uncharacterized protein7.0e-5481.88Show/hide
Query:  METPRLLNLLLLLCFAAAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAADEEEEAFGRVVKEA
        M++   L LLLLL F AAAAE AS R PGFLFSRT GRCT QFWSS  EAWPRMAPESATVAKIFGSRA ERYGSEMTLMEAA  A  EEE FGRVVKEA
Subjt:  METPRLLNLLLLLCFAAAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAADEEEEAFGRVVKEA

Query:  TAALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFALANQLC
        TAALLNSYARRR+FPYSAWEVKTL IKALVSKEAA LQSQRFA AN+ C
Subjt:  TAALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFALANQLC

A0A6J1CRA8 uncharacterized protein LOC1110134595.7e-5681.58Show/hide
Query:  METPRLLNLLLLLCFAAA--AAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAADEEEEAFGRVVK
        METPR LNLLLLLCFA +   A AAS RRPGFLFSR RGRCT QFWSS REAWPRMAPE+ATVAK+FGSRA ERYGSEMTLMEAAA A   +EAFGR+VK
Subjt:  METPRLLNLLLLLCFAAA--AAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAADEEEEAFGRVVK

Query:  EATAALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN
        EATAALLNSY  RREFP SAWEVKTL IKALVS+EAAALQSQRFA+AN +CN
Subjt:  EATAALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN

A0A6J1GR22 uncharacterized protein LOC1114562701.8e-5783.23Show/hide
Query:  METPRLLNLLLLLCFA-AAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAA----DEEEEAFGR
        MET RLL+ LLLL FA AAA EAA +RRPGFLFSRTRGRCTP+FWSS REAWPRMAPESATVAKIFGSRAHERYGSEMTL+ AA  A    +EEEEAFGR
Subjt:  METPRLLNLLLLLCFA-AAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAA----DEEEEAFGR

Query:  VVKEATAALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN
        VVKEATAALLNSYA RR+FPY+AWEVKTL IKALVSKEAAALQSQRFA AN+ CN
Subjt:  VVKEATAALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN

A0A6J1JR18 uncharacterized protein LOC1114881256.1e-5883.77Show/hide
Query:  METPRLLNLLLLLCFAAAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAA----DEEEEAFGRV
        MET RLL+ LLLL FAAAA EAA +RRPGFLFSRTRGRCTP+FWSS REAWPRMAPESATVAKIFGSRAHERYGSEMTL+ AA  A    +EEEEAFGRV
Subjt:  METPRLLNLLLLLCFAAAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAA----DEEEEAFGRV

Query:  VKEATAALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN
        VKEATAALLNSYA RR+FPY+AWEVKTL IKALVSKEAAALQSQRFA AN+ CN
Subjt:  VKEATAALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G16630.1 Pollen Ole e 1 allergen and extensin family protein5.9e-0536.61Show/hide
Query:  CTPQFWSSG--REAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAADEEEEAFGRVVKEATAALLNSYARRREFPYSAWEVKTLFIKALV--SKEA
        C+ Q W     R  W  + P++  VA  FG  A   YG++MT+ E   A D   EA+  +++EAT ALLNSY     FPY++  V T    AL+  S+  
Subjt:  CTPQFWSSG--REAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAADEEEEAFGRVVKEATAALLNSYARRREFPYSAWEVKTLFIKALV--SKEA

Query:  AALQSQRFALAN
          + + RF  AN
Subjt:  AALQSQRFALAN

AT2G20515.1 unknown protein9.4e-3553.42Show/hide
Query:  LLNLLLLLCFAAAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESATVAKIFGSR-AHERYGSEMTLMEAAAAADEEEEAFGRVVKEATAAL
        +L    LLCF A  + A    RPGF+++R RGRCTPQ+WSS REAWPRM PE +TV KIFG   A ER+ S++TL+E+ A  DEE  A+G ++K+  AAL
Subjt:  LLNLLLLLCFAAAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESATVAKIFGSR-AHERYGSEMTLMEAAAAADEEEEAFGRVVKEATAAL

Query:  LNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN
        +NSYA R+ F Y+ WEVKT+ I+A+VS+ AA  Q++ FA+AN  C+
Subjt:  LNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACTCCTCGTTTACTCAATCTTCTTCTCCTTCTCTGCTTCGCCGCCGCCGCTGCAGAAGCAGCATCAACGCGCCGCCCTGGTTTTCTCTTCTCAAGAACCAGAGG
AAGATGCACTCCACAATTCTGGAGTAGTGGGAGAGAGGCTTGGCCAAGGATGGCGCCGGAGTCGGCGACGGTGGCGAAAATTTTCGGATCGAGAGCTCACGAACGGTACG
GATCTGAGATGACGCTAATGGAGGCGGCGGCGGCGGCGGATGAGGAAGAGGAGGCGTTCGGTAGAGTTGTGAAGGAAGCTACTGCAGCATTGTTGAATTCGTATGCGAGA
AGAAGGGAGTTTCCATATTCGGCTTGGGAGGTGAAGACTTTGTTCATCAAAGCTTTGGTGTCTAAAGAGGCTGCTGCTCTTCAGTCTCAACGTTTTGCTCTCGCTAATCA
GCTCTGTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGACTCCTCGTTTACTCAATCTTCTTCTCCTTCTCTGCTTCGCCGCCGCCGCTGCAGAAGCAGCATCAACGCGCCGCCCTGGTTTTCTCTTCTCAAGAACCAGAGG
AAGATGCACTCCACAATTCTGGAGTAGTGGGAGAGAGGCTTGGCCAAGGATGGCGCCGGAGTCGGCGACGGTGGCGAAAATTTTCGGATCGAGAGCTCACGAACGGTACG
GATCTGAGATGACGCTAATGGAGGCGGCGGCGGCGGCGGATGAGGAAGAGGAGGCGTTCGGTAGAGTTGTGAAGGAAGCTACTGCAGCATTGTTGAATTCGTATGCGAGA
AGAAGGGAGTTTCCATATTCGGCTTGGGAGGTGAAGACTTTGTTCATCAAAGCTTTGGTGTCTAAAGAGGCTGCTGCTCTTCAGTCTCAACGTTTTGCTCTCGCTAATCA
GCTCTGTAATTAA
Protein sequenceShow/hide protein sequence
METPRLLNLLLLLCFAAAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAADEEEEAFGRVVKEATAALLNSYAR
RREFPYSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN