; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg014226 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg014226
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionhelicase protein MOM1
Genome locationscaffold3:29990081..29991093
RNA-Seq ExpressionSpg014226
SyntenySpg014226
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0004386 - helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0070615 - nucleosome-dependent ATPase activity (molecular function)
InterPro domainsIPR000330 - SNF2, N-terminal
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR038718 - SNF2-like, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607145.1 Helicase protein MOM1, partial [Cucurbita argyrosperma subsp. sororia]8.4e-10986.96Show/hide
Query:  MAKVIAFILTLQPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDEC
        M KVIAFILTL+PDV +PFLIISTST LG WDD L R+APSFS VVYKGNKNVRKNIRDLEFYQGN P+FQALICSPEVMMEDLDVL CINWEVIVVDEC
Subjt:  MAKVIAFILTLQPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDEC

Query:  QRPAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLETNDGDNVSKLKERLLHHTAYTCTSKFVEYWVPARISNVQLELYCA
        QRP ISSHFEKMK L ADMWLLVLADQLKDIKDDYHNLLSLL+ N+QVQS++TL+TNDGDN+SKLKERLL+HTAYTCTSKFVEYWVPARISNVQLELYCA
Subjt:  QRPAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLETNDGDNVSKLKERLLHHTAYTCTSKFVEYWVPARISNVQLELYCA

Query:  ALLCNSALLCSSFKSDLLDNIHDMLVSTRK
         LL N+ LL SSFKSDLLDNIH+MLVSTRK
Subjt:  ALLCNSALLCSSFKSDLLDNIHDMLVSTRK

KAG7036831.1 Helicase protein MOM1 [Cucurbita argyrosperma subsp. argyrosperma]8.4e-10986.96Show/hide
Query:  MAKVIAFILTLQPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDEC
        M KVIAFILTL+PDV +PFLIISTST LG WDD L R+APSFS VVYKGNKNVRKNIRDLEFYQGN P+FQALICSPEVMMEDLDVL CINWEVIVVDEC
Subjt:  MAKVIAFILTLQPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDEC

Query:  QRPAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLETNDGDNVSKLKERLLHHTAYTCTSKFVEYWVPARISNVQLELYCA
        QRP ISSHFEKMK L ADMWLLVLADQLKDIKDDYHNLLSLL+ N+QVQS++TL+TNDGDN+SKLKERLL+HTAYTCTSKFVEYWVPARISNVQLELYCA
Subjt:  QRPAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLETNDGDNVSKLKERLLHHTAYTCTSKFVEYWVPARISNVQLELYCA

Query:  ALLCNSALLCSSFKSDLLDNIHDMLVSTRK
         LL N+ LL SSFKSDLLDNIH+MLVSTRK
Subjt:  ALLCNSALLCSSFKSDLLDNIHDMLVSTRK

XP_022949439.1 helicase protein MOM1 isoform X1 [Cucurbita moschata]8.4e-10986.96Show/hide
Query:  MAKVIAFILTLQPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDEC
        M KVIAFILTL+PDV +PFLIISTST LG WDD L R+APSFS VVYKGNKNVRKNIRDLEFYQGN P+FQALICSPEVMMEDLDVL CINWEVIVVDEC
Subjt:  MAKVIAFILTLQPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDEC

Query:  QRPAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLETNDGDNVSKLKERLLHHTAYTCTSKFVEYWVPARISNVQLELYCA
        QRP ISSHFEKMK L ADMWLLVLADQLKDIKDDYHNLLSLL+ N+QVQS++TL+TNDGDN+SKLKERLL+HTAYTCTSKFVEYWVPARISNVQLELYCA
Subjt:  QRPAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLETNDGDNVSKLKERLLHHTAYTCTSKFVEYWVPARISNVQLELYCA

Query:  ALLCNSALLCSSFKSDLLDNIHDMLVSTRK
         LL N+ LL SSFKSDLLDNIH+MLVSTRK
Subjt:  ALLCNSALLCSSFKSDLLDNIHDMLVSTRK

XP_022949441.1 helicase protein MOM1 isoform X2 [Cucurbita moschata]8.4e-10986.96Show/hide
Query:  MAKVIAFILTLQPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDEC
        M KVIAFILTL+PDV +PFLIISTST LG WDD L R+APSFS VVYKGNKNVRKNIRDLEFYQGN P+FQALICSPEVMMEDLDVL CINWEVIVVDEC
Subjt:  MAKVIAFILTLQPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDEC

Query:  QRPAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLETNDGDNVSKLKERLLHHTAYTCTSKFVEYWVPARISNVQLELYCA
        QRP ISSHFEKMK L ADMWLLVLADQLKDIKDDYHNLLSLL+ N+QVQS++TL+TNDGDN+SKLKERLL+HTAYTCTSKFVEYWVPARISNVQLELYCA
Subjt:  QRPAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLETNDGDNVSKLKERLLHHTAYTCTSKFVEYWVPARISNVQLELYCA

Query:  ALLCNSALLCSSFKSDLLDNIHDMLVSTRK
         LL N+ LL SSFKSDLLDNIH+MLVSTRK
Subjt:  ALLCNSALLCSSFKSDLLDNIHDMLVSTRK

XP_023523644.1 helicase protein MOM1 [Cucurbita pepo subsp. pepo]8.4e-10986.96Show/hide
Query:  MAKVIAFILTLQPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDEC
        M KVIAFILTL+PDV +PFLIISTST LG WDD L R+APSFS VVYKGNKNVRKNIRDLEFYQGN P+FQALICSPEVMMEDLDVL CINWEVIVVDEC
Subjt:  MAKVIAFILTLQPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDEC

Query:  QRPAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLETNDGDNVSKLKERLLHHTAYTCTSKFVEYWVPARISNVQLELYCA
        QRP ISSHFEKMK L ADMWLLVLADQLKDIKDDYHNLLSLL+ N+QVQS++TL+TNDGDN+SKLKERLL+HTAYTCTSKFVEYWVPARISNVQLELYCA
Subjt:  QRPAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLETNDGDNVSKLKERLLHHTAYTCTSKFVEYWVPARISNVQLELYCA

Query:  ALLCNSALLCSSFKSDLLDNIHDMLVSTRK
         LL N+ LL SSFKSDLLDNIH+MLVSTRK
Subjt:  ALLCNSALLCSSFKSDLLDNIHDMLVSTRK

TrEMBL top hitse value%identityAlignment
A0A6J1GC12 helicase protein MOM1 isoform X34.1e-10986.96Show/hide
Query:  MAKVIAFILTLQPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDEC
        M KVIAFILTL+PDV +PFLIISTST LG WDD L R+APSFS VVYKGNKNVRKNIRDLEFYQGN P+FQALICSPEVMMEDLDVL CINWEVIVVDEC
Subjt:  MAKVIAFILTLQPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDEC

Query:  QRPAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLETNDGDNVSKLKERLLHHTAYTCTSKFVEYWVPARISNVQLELYCA
        QRP ISSHFEKMK L ADMWLLVLADQLKDIKDDYHNLLSLL+ N+QVQS++TL+TNDGDN+SKLKERLL+HTAYTCTSKFVEYWVPARISNVQLELYCA
Subjt:  QRPAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLETNDGDNVSKLKERLLHHTAYTCTSKFVEYWVPARISNVQLELYCA

Query:  ALLCNSALLCSSFKSDLLDNIHDMLVSTRK
         LL N+ LL SSFKSDLLDNIH+MLVSTRK
Subjt:  ALLCNSALLCSSFKSDLLDNIHDMLVSTRK

A0A6J1GC13 helicase protein MOM1 isoform X24.1e-10986.96Show/hide
Query:  MAKVIAFILTLQPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDEC
        M KVIAFILTL+PDV +PFLIISTST LG WDD L R+APSFS VVYKGNKNVRKNIRDLEFYQGN P+FQALICSPEVMMEDLDVL CINWEVIVVDEC
Subjt:  MAKVIAFILTLQPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDEC

Query:  QRPAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLETNDGDNVSKLKERLLHHTAYTCTSKFVEYWVPARISNVQLELYCA
        QRP ISSHFEKMK L ADMWLLVLADQLKDIKDDYHNLLSLL+ N+QVQS++TL+TNDGDN+SKLKERLL+HTAYTCTSKFVEYWVPARISNVQLELYCA
Subjt:  QRPAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLETNDGDNVSKLKERLLHHTAYTCTSKFVEYWVPARISNVQLELYCA

Query:  ALLCNSALLCSSFKSDLLDNIHDMLVSTRK
         LL N+ LL SSFKSDLLDNIH+MLVSTRK
Subjt:  ALLCNSALLCSSFKSDLLDNIHDMLVSTRK

A0A6J1GCT4 helicase protein MOM1 isoform X14.1e-10986.96Show/hide
Query:  MAKVIAFILTLQPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDEC
        M KVIAFILTL+PDV +PFLIISTST LG WDD L R+APSFS VVYKGNKNVRKNIRDLEFYQGN P+FQALICSPEVMMEDLDVL CINWEVIVVDEC
Subjt:  MAKVIAFILTLQPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDEC

Query:  QRPAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLETNDGDNVSKLKERLLHHTAYTCTSKFVEYWVPARISNVQLELYCA
        QRP ISSHFEKMK L ADMWLLVLADQLKDIKDDYHNLLSLL+ N+QVQS++TL+TNDGDN+SKLKERLL+HTAYTCTSKFVEYWVPARISNVQLELYCA
Subjt:  QRPAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLETNDGDNVSKLKERLLHHTAYTCTSKFVEYWVPARISNVQLELYCA

Query:  ALLCNSALLCSSFKSDLLDNIHDMLVSTRK
         LL N+ LL SSFKSDLLDNIH+MLVSTRK
Subjt:  ALLCNSALLCSSFKSDLLDNIHDMLVSTRK

A0A6J1K931 helicase protein MOM1 isoform X36.9e-10986.52Show/hide
Query:  MAKVIAFILTLQPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDEC
        M KVIAFILTL+PDV +PFLIISTST LG WDD L R+APSFS VVYKGNKNVRKNIRDLEFYQGN P+FQALICSPEVMMED+DVL CINWEVIVVDEC
Subjt:  MAKVIAFILTLQPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDEC

Query:  QRPAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLETNDGDNVSKLKERLLHHTAYTCTSKFVEYWVPARISNVQLELYCA
        QRP ISSHFEKMK L ADMWLLVLADQLKDIKDDYHNLLSLL+ N+QVQS++TL+TNDGDN+SKLKERLL+HTAYTCTSKFVEYWVPARISNVQLELYCA
Subjt:  QRPAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLETNDGDNVSKLKERLLHHTAYTCTSKFVEYWVPARISNVQLELYCA

Query:  ALLCNSALLCSSFKSDLLDNIHDMLVSTRK
         LL N+ LL SSFKSDLLDNIH+MLVSTRK
Subjt:  ALLCNSALLCSSFKSDLLDNIHDMLVSTRK

A0A6J1KDL3 helicase protein MOM1 isoform X16.9e-10986.52Show/hide
Query:  MAKVIAFILTLQPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDEC
        M KVIAFILTL+PDV +PFLIISTST LG WDD L R+APSFS VVYKGNKNVRKNIRDLEFYQGN P+FQALICSPEVMMED+DVL CINWEVIVVDEC
Subjt:  MAKVIAFILTLQPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDEC

Query:  QRPAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLETNDGDNVSKLKERLLHHTAYTCTSKFVEYWVPARISNVQLELYCA
        QRP ISSHFEKMK L ADMWLLVLADQLKDIKDDYHNLLSLL+ N+QVQS++TL+TNDGDN+SKLKERLL+HTAYTCTSKFVEYWVPARISNVQLELYCA
Subjt:  QRPAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLETNDGDNVSKLKERLLHHTAYTCTSKFVEYWVPARISNVQLELYCA

Query:  ALLCNSALLCSSFKSDLLDNIHDMLVSTRK
         LL N+ LL SSFKSDLLDNIH+MLVSTRK
Subjt:  ALLCNSALLCSSFKSDLLDNIHDMLVSTRK

SwissProt top hitse value%identityAlignment
E9PZM4 Chromodomain-helicase-DNA-binding protein 21.1e-0727Show/hide
Query:  KVIAFILTL--QPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCP--MFQALICSPEVMMEDLDVLGCINWEVIVVD
        + I+F+  L  Q  +  PFLI+   +TL  W      +AP  +VVVY G+   R  IR+ E+         F ALI + E++++D  VLG INW  + VD
Subjt:  KVIAFILTL--QPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCP--MFQALICSPEVMMEDLDVLGCINWEVIVVD

Query:  ECQR--PAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLETNDG---DNVSKLKERLLHHTAYTCTSKFVEYWVPARISNV
        E  R     S  ++ +   K++  LL+    L++   +  +LL  +   ++ +  +  E + G   +N  +   ++L         K VE  +PA++  +
Subjt:  ECQR--PAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLETNDG---DNVSKLKERLLHHTAYTCTSKFVEYWVPARISNV

O14647 Chromodomain-helicase-DNA-binding protein 21.1e-0727Show/hide
Query:  KVIAFILTL--QPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCP--MFQALICSPEVMMEDLDVLGCINWEVIVVD
        + I+F+  L  Q  +  PFLI+   +TL  W      +AP  +VVVY G+   R  IR+ E+         F ALI + E++++D  VLG INW  + VD
Subjt:  KVIAFILTL--QPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCP--MFQALICSPEVMMEDLDVLGCINWEVIVVD

Query:  ECQR--PAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLETNDG---DNVSKLKERLLHHTAYTCTSKFVEYWVPARISNV
        E  R     S  ++ +   K++  LL+    L++   +  +LL  +   ++ +  +  E + G   +N  +   ++L         K VE  +PA++  +
Subjt:  ECQR--PAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLETNDG---DNVSKLKERLLHHTAYTCTSKFVEYWVPARISNV

Q12873 Chromodomain-helicase-DNA-binding protein 37.4e-0727.32Show/hide
Query:  KVIAFILTLQPD--VRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEF-YQGNC---------------PMFQALICSPEVMMEDL
        + I F+ +L  +   + PFL+ +  +T+  W+     +AP F VV Y G+K+ R  IR+ EF ++ N                  F  L+ S E++  D 
Subjt:  KVIAFILTLQPD--VRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEF-YQGNC---------------PMFQALICSPEVMMEDL

Query:  DVLGCINWEVIVVDECQR--PAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLD----TNDQVQSEDTLETNDGDNVSKLKERLLHH
          LG I W  +VVDE  R     S  F  +   K D  LL+    L++  ++  +LL+ L      N +   E+  + +  D + KL + L  H
Subjt:  DVLGCINWEVIVVDECQR--PAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLD----TNDQVQSEDTLETNDGDNVSKLKERLLHH

Q8TDI0 Chromodomain-helicase-DNA-binding protein 57.4e-0726.8Show/hide
Query:  KVIAFILTLQPD--VRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEF-YQGNC---------------PMFQALICSPEVMMEDL
        + I F+ +L  +   + P+L+ +  +T+  W+     +AP F VV Y G+K  R  IR+ EF ++ N                  F  L+ S E++  D 
Subjt:  KVIAFILTLQPD--VRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEF-YQGNC---------------PMFQALICSPEVMMEDL

Query:  DVLGCINWEVIVVDECQR--PAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLD----TNDQVQSEDTLETNDGDNVSKLKERLLHH
         +LG I W  +VVDE  R     S  F  +   K D  LL+    L++  ++  +LL+ L      N +   E+  + +  D + KL + L  H
Subjt:  DVLGCINWEVIVVDECQR--PAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLD----TNDQVQSEDTLETNDGDNVSKLKERLLHH

Q9US25 Chromodomain helicase hrp11.8e-0826.53Show/hide
Query:  KVIAFILTLQPDVRQ--PFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFY---QGNCPMFQALICSPEVMMEDLDVLGCINWEVIVV
        + + F+  L   ++Q  PFLI+   +T+  W + L  + P  + + Y GN   R NIR+ EFY         F  L+ + E +++D   L  I W+ + +
Subjt:  KVIAFILTLQPDVRQ--PFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFY---QGNCPMFQALICSPEVMMEDLDVLGCINWEVIVV

Query:  DECQR--PAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLL
        DE  R   + SS +E +   +    LL+    L++   +  +L++ L
Subjt:  DECQR--PAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLL

Arabidopsis top hitse value%identityAlignment
AT2G13370.1 chromatin remodeling 53.4e-0726.39Show/hide
Query:  PFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQ----GNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDECQRPAISSH--FEK
        PFL++   +TL  W     ++ P  +++VY G +  R+  +  EFY     G    F AL+ + EV+++D  VL  I W  ++VDE  R   S    +  
Subjt:  PFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQ----GNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDECQRPAISSH--FEK

Query:  MKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLE
        +        LL+    L++  ++   LL  LD       ++ +E
Subjt:  MKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLE

AT2G25170.1 chromatin remodeling factor CHD3 (PICKLE)1.5e-0723.46Show/hide
Query:  IAFILTLQPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCP--------------------MFQALICSPEVMMEDL
        IA + +L  +   P L+I+  +TL  W+     +AP  +VV+Y G    R  IR+ EFY                          F  L+ S E++  D 
Subjt:  IAFILTLQPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCP--------------------MFQALICSPEVMMEDL

Query:  DVLGCINWEVIVVDECQR--PAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTND----QVQSEDTLETNDGDNVSKLKERLLHHTAYTCT
         VL  I WE ++VDE  R     S  F  +    ++  +L+    L++  D+   L+  LD       +   E+  + N  + +S+L + L  H      
Subjt:  DVLGCINWEVIVVDECQR--PAISSHFEKMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTND----QVQSEDTLETNDGDNVSKLKERLLHHTAYTCT

Query:  SKFVEYWVPAR-------ISNVQLELYCAALLCNSALLCSSFKSDLLDNIHDMLVSTRKV
           ++   P +       +S++Q E Y A    N  +L    K     +++++++  RKV
Subjt:  SKFVEYWVPAR-------ISNVQLELYCAALLCNSALLCSSFKSDLLDNIHDMLVSTRKV

AT2G44980.1 SNF2 domain-containing protein / helicase domain-containing protein4.4e-0729.41Show/hide
Query:  PFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDECQR
        PFL++   +    W   + RF P+  V+ Y G+K  R ++R   +  G+   F  L+ + ++ + D D L  I W+  ++DE QR
Subjt:  PFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDECQR

AT2G46020.2 transcription regulatory protein SNF2, putative1.7e-0634.88Show/hide
Query:  PFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPM-FQALICSPEVMMEDLDVLGCINWEVIVVDECQR
        P LII  +  L  W   L  + PS S + Y G K+ R  +    F Q  C M F  L+ + E +M D   L  ++W+ I++DE QR
Subjt:  PFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPM-FQALICSPEVMMEDLDVLGCINWEVIVVDECQR

AT5G18620.1 chromatin remodeling factor172.9e-0624.43Show/hide
Query:  VRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDECQRPAISSHF--EKM
        +  P ++++  +TLG W + + RF P    V + GN   R++IR+     G    F   + S E+ +++   L   +W  I++DE  R    +    + M
Subjt:  VRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDECQRPAISSHF--EKM

Query:  KMLKADMWLLVLADQLKDIKDDYHNLLSLLD
        ++   +  LL+    L   +++ H L +LL+
Subjt:  KMLKADMWLLVLADQLKDIKDDYHNLLSLLD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGGTTATTGCATTTATTTTAACTTTGCAGCCTGATGTCCGTCAACCCTTTCTCATCATCTCAACTTCCACTACACTTGGTTTCTGGGATGATGTGTTATTTCG
TTTTGCACCATCTTTCAGTGTTGTAGTTTATAAAGGAAACAAAAATGTACGGAAAAACATTAGAGATCTAGAGTTTTACCAAGGAAATTGCCCAATGTTTCAAGCTCTTA
TTTGCTCCCCGGAAGTAATGATGGAGGATCTAGATGTGTTGGGCTGCATAAACTGGGAAGTAATAGTTGTTGATGAGTGTCAACGCCCAGCAATTTCTTCACATTTTGAA
AAAATGAAGATGCTAAAGGCAGATATGTGGCTTCTTGTTCTTGCTGATCAGCTAAAGGATATCAAAGATGATTATCATAATCTTCTCTCTCTACTTGACACGAATGACCA
AGTTCAAAGTGAAGATACTCTGGAGACCAATGATGGTGATAATGTCAGCAAACTTAAGGAGAGATTATTACATCATACTGCATATACTTGCACTTCTAAATTTGTTGAGT
ATTGGGTTCCTGCACGGATATCAAATGTGCAACTTGAGCTTTATTGTGCCGCCCTACTTTGTAACTCTGCATTGCTTTGCTCATCATTCAAAAGTGATTTGCTTGACAAC
ATCCATGACATGCTCGTTTCAACTAGGAAGGTTGATTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGGTTATTGCATTTATTTTAACTTTGCAGCCTGATGTCCGTCAACCCTTTCTCATCATCTCAACTTCCACTACACTTGGTTTCTGGGATGATGTGTTATTTCG
TTTTGCACCATCTTTCAGTGTTGTAGTTTATAAAGGAAACAAAAATGTACGGAAAAACATTAGAGATCTAGAGTTTTACCAAGGAAATTGCCCAATGTTTCAAGCTCTTA
TTTGCTCCCCGGAAGTAATGATGGAGGATCTAGATGTGTTGGGCTGCATAAACTGGGAAGTAATAGTTGTTGATGAGTGTCAACGCCCAGCAATTTCTTCACATTTTGAA
AAAATGAAGATGCTAAAGGCAGATATGTGGCTTCTTGTTCTTGCTGATCAGCTAAAGGATATCAAAGATGATTATCATAATCTTCTCTCTCTACTTGACACGAATGACCA
AGTTCAAAGTGAAGATACTCTGGAGACCAATGATGGTGATAATGTCAGCAAACTTAAGGAGAGATTATTACATCATACTGCATATACTTGCACTTCTAAATTTGTTGAGT
ATTGGGTTCCTGCACGGATATCAAATGTGCAACTTGAGCTTTATTGTGCCGCCCTACTTTGTAACTCTGCATTGCTTTGCTCATCATTCAAAAGTGATTTGCTTGACAAC
ATCCATGACATGCTCGTTTCAACTAGGAAGGTTGATTCTTGA
Protein sequenceShow/hide protein sequence
MAKVIAFILTLQPDVRQPFLIISTSTTLGFWDDVLFRFAPSFSVVVYKGNKNVRKNIRDLEFYQGNCPMFQALICSPEVMMEDLDVLGCINWEVIVVDECQRPAISSHFE
KMKMLKADMWLLVLADQLKDIKDDYHNLLSLLDTNDQVQSEDTLETNDGDNVSKLKERLLHHTAYTCTSKFVEYWVPARISNVQLELYCAALLCNSALLCSSFKSDLLDN
IHDMLVSTRKVDS