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Spg014231 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg014231
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionE3 ubiquitin-protein ligase MIEL1-like
Genome locationscaffold3:44069759..44070097
RNA-Seq ExpressionSpg014231
SyntenySpg014231
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575858.1 hypothetical protein SDJN03_26497, partial [Cucurbita argyrosperma subsp. sororia]9.9e-2366.98Show/hide
Query:  MASIKSLLSIALVSLLLISESHATSAAVHGGAYYSNSLAGIIHRNILQTADHRQVAENKNG-EYSFEQKIRRRPRRPVKRAEGPSPSAANRSRTSSFGVG
        MA IKSL+SIAL++LLL+SE    SAA HG A   + LAG+  R+ LQTA+  QVAEN  G +YSFEQKIRRR RR V+RAEGPSPS+AN SRTSSFG+G
Subjt:  MASIKSLLSIALVSLLLISESHATSAAVHGGAYYSNSLAGIIHRNILQTADHRQVAENKNG-EYSFEQKIRRRPRRPVKRAEGPSPSAANRSRTSSFGVG

Query:  SVLCLC
        S+LCLC
Subjt:  SVLCLC

KAG6575859.1 hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia]6.6e-1153.91Show/hide
Query:  MASIKSLLSIALVSLLLISESHATSAAVHGGAYYSNSLAGIIHRNILQTADHRQVAENKNGEYSFEQKIR---RRPRRPVKRAEGPSPSAANRSRTSSFG
        MA++KSL+S+AL++LLL SES   SA    G   SNSL G++ RN+LQTA H Q+A+N + E S E+K+    +R  RPV  A G   SAANRSR +S G
Subjt:  MASIKSLLSIALVSLLLISESHATSAAVHGGAYYSNSLAGIIHRNILQTADHRQVAENKNGEYSFEQKIR---RRPRRPVKRAEGPSPSAANRSRTSSFG

Query:  VGSVLCLCIVLGLFL
        VGSVL   +VLGLFL
Subjt:  VGSVLCLCIVLGLFL

KAG6593163.1 hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1560.53Show/hide
Query:  MASIKSLLSIALVSLLLISESHATSAAVHGGAYYSNSLAGIIHRNILQ-TADHRQVAENKNGEYSFEQKIRRRPR-RPVKRAEGPSPSAANRSRTSSFGV
        MA+IK+LLSIAL++LLL  ES  TSAAVH GA  S SLAGI+ RNI+Q TADH QVAE K     F   I+RR R RPV     P  SAANRSR +  GV
Subjt:  MASIKSLLSIALVSLLLISESHATSAAVHGGAYYSNSLAGIIHRNILQ-TADHRQVAENKNGEYSFEQKIRRRPR-RPVKRAEGPSPSAANRSRTSSFGV

Query:  GSVLCLCIVLGLFL
        GS+LC+ ++LGLFL
Subjt:  GSVLCLCIVLGLFL

XP_022954099.1 uncharacterized protein LOC111456466 [Cucurbita moschata]8.9e-2466.37Show/hide
Query:  MASIKSLLSIALVSLLLISESHATSAAVHGGAYYSNSLAGIIHRNILQTADHRQVAENKNG-EYSFEQKIRRRPRRPVKRAEGPSPSAANRSRTSSFGVG
        MA IKSL+SIAL++LLL+SE    SAA HG A   + LA +  R+ LQTA+  QVAEN  G +YSFEQKIRRR RR V+RAEGPSPS+AN S+TSSFGVG
Subjt:  MASIKSLLSIALVSLLLISESHATSAAVHGGAYYSNSLAGIIHRNILQTADHRQVAENKNG-EYSFEQKIRRRPRRPVKRAEGPSPSAANRSRTSSFGVG

Query:  SVLCLCIVLGLFL
        S+LCLC V GLFL
Subjt:  SVLCLCIVLGLFL

XP_022992473.1 uncharacterized protein LOC111488793 isoform X1 [Cucurbita maxima]1.2e-2366.37Show/hide
Query:  MASIKSLLSIALVSLLLISESHATSAAVHGGAYYSNSLAGIIHRNILQTADHRQVAENKNG-EYSFEQKIRRRPRRPVKRAEGPSPSAANRSRTSSFGVG
        MA IKSL+SIAL++LLL+ E    SAA HG A   + LAG+   + LQTA+  QVAEN  G +YSFEQKIRRR RR V+RAEGPSPS+AN SRTSSFGVG
Subjt:  MASIKSLLSIALVSLLLISESHATSAAVHGGAYYSNSLAGIIHRNILQTADHRQVAENKNG-EYSFEQKIRRRPRRPVKRAEGPSPSAANRSRTSSFGVG

Query:  SVLCLCIVLGLFL
        S+LCLC V GLFL
Subjt:  SVLCLCIVLGLFL

TrEMBL top hitse value%identityAlignment
A0A0A0K7L9 Uncharacterized protein4.1e-0644.35Show/hide
Query:  ASIKSLLSIALVSL-LLISESHATSAAV-HGGAYYSNSLAGIIHRNILQTADHRQVAENKNGEYSFEQKIRRRPRRPVKR--AEGPSPSAANRSRTSSFG
        +S+K+L+SI  ++L +L+S++ +TS+AV H  A+ S +     HRN+LQ  D  Q     +G        RRR RR V R  A+ PSPS ANRS+T S G
Subjt:  ASIKSLLSIALVSL-LLISESHATSAAV-HGGAYYSNSLAGIIHRNILQTADHRQVAENKNGEYSFEQKIRRRPRRPVKR--AEGPSPSAANRSRTSSFG

Query:  VGSVLCLCIVLGLFL
         GSVL L IV+ LF+
Subjt:  VGSVLCLCIVLGLFL

A0A0A0K934 Uncharacterized protein6.1e-1053.06Show/hide
Query:  IKSLLSIALVSLLLISESHATSAAVHGGAYYSNSLAGIIHRNILQTADHRQVAENKNG-EYSFEQKI-RRRPRRPVKRAEGPSPSAANRSRTSSFGVG
        IKSL+S+AL++LLL+S   +TSA  H  A   NS  G     + Q  +++QV ENKNG  YSFEQKI ++R RR  K AEGPSPS ANRSR + F +G
Subjt:  IKSLLSIALVSLLLISESHATSAAVHGGAYYSNSLAGIIHRNILQTADHRQVAENKNG-EYSFEQKI-RRRPRRPVKRAEGPSPSAANRSRTSSFGVG

A0A5D3D3Y6 E3 ubiquitin-protein ligase MIEL1-like4.3e-0846.28Show/hide
Query:  MASIKSLLSIALVSLLLISESHATSAAVHGGAYYSNSLAGIIHRNILQTADHRQVAENKNGEYSFEQKIR------RRPRRPVKRAEGPS---PSAANRS
        MA+I+ L+SIAL++LL  SES  T          S+SL GI HRNIL T  HR V  N + E S+++K        RR  RP+  +        SA NRS
Subjt:  MASIKSLLSIALVSLLLISESHATSAAVHGGAYYSNSLAGIIHRNILQTADHRQVAENKNGEYSFEQKIR------RRPRRPVKRAEGPS---PSAANRS

Query:  RTSSFGVGSVLCLCIVLGLFL
        R +SF VGS+LC+CI LGLFL
Subjt:  RTSSFGVGSVLCLCIVLGLFL

A0A6J1GRX2 uncharacterized protein LOC1114564664.3e-2466.37Show/hide
Query:  MASIKSLLSIALVSLLLISESHATSAAVHGGAYYSNSLAGIIHRNILQTADHRQVAENKNG-EYSFEQKIRRRPRRPVKRAEGPSPSAANRSRTSSFGVG
        MA IKSL+SIAL++LLL+SE    SAA HG A   + LA +  R+ LQTA+  QVAEN  G +YSFEQKIRRR RR V+RAEGPSPS+AN S+TSSFGVG
Subjt:  MASIKSLLSIALVSLLLISESHATSAAVHGGAYYSNSLAGIIHRNILQTADHRQVAENKNG-EYSFEQKIRRRPRRPVKRAEGPSPSAANRSRTSSFGVG

Query:  SVLCLCIVLGLFL
        S+LCLC V GLFL
Subjt:  SVLCLCIVLGLFL

A0A6J1JZB1 uncharacterized protein LOC111488793 isoform X15.6e-2466.37Show/hide
Query:  MASIKSLLSIALVSLLLISESHATSAAVHGGAYYSNSLAGIIHRNILQTADHRQVAENKNG-EYSFEQKIRRRPRRPVKRAEGPSPSAANRSRTSSFGVG
        MA IKSL+SIAL++LLL+ E    SAA HG A   + LAG+   + LQTA+  QVAEN  G +YSFEQKIRRR RR V+RAEGPSPS+AN SRTSSFGVG
Subjt:  MASIKSLLSIALVSLLLISESHATSAAVHGGAYYSNSLAGIIHRNILQTADHRQVAENKNG-EYSFEQKIRRRPRRPVKRAEGPSPSAANRSRTSSFGVG

Query:  SVLCLCIVLGLFL
        S+LCLC V GLFL
Subjt:  SVLCLCIVLGLFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATCAAATCCCTACTTTCAATTGCTCTTGTCTCTCTTCTCTTGATCTCTGAATCCCATGCCACTTCCGCCGCCGTCCACGGTGGAGCTTATTATTCCAATTC
TCTTGCCGGAATCATTCACCGGAACATCCTTCAGACGGCGGATCATCGTCAAGTTGCAGAGAATAAGAACGGAGAGTACTCGTTTGAACAAAAGATCAGAAGGCGGCCCC
GACGACCTGTAAAGAGAGCCGAAGGTCCAAGTCCGTCGGCTGCGAATCGGAGCCGAACGTCGTCATTTGGCGTTGGGTCTGTGTTGTGTCTCTGTATTGTTCTTGGTTTG
TTCCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCATCAAATCCCTACTTTCAATTGCTCTTGTCTCTCTTCTCTTGATCTCTGAATCCCATGCCACTTCCGCCGCCGTCCACGGTGGAGCTTATTATTCCAATTC
TCTTGCCGGAATCATTCACCGGAACATCCTTCAGACGGCGGATCATCGTCAAGTTGCAGAGAATAAGAACGGAGAGTACTCGTTTGAACAAAAGATCAGAAGGCGGCCCC
GACGACCTGTAAAGAGAGCCGAAGGTCCAAGTCCGTCGGCTGCGAATCGGAGCCGAACGTCGTCATTTGGCGTTGGGTCTGTGTTGTGTCTCTGTATTGTTCTTGGTTTG
TTCCTATGA
Protein sequenceShow/hide protein sequence
MASIKSLLSIALVSLLLISESHATSAAVHGGAYYSNSLAGIIHRNILQTADHRQVAENKNGEYSFEQKIRRRPRRPVKRAEGPSPSAANRSRTSSFGVGSVLCLCIVLGL
FL