; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg014259 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg014259
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description40S ribosomal protein S19
Genome locationscaffold3:43352673..43355113
RNA-Seq ExpressionSpg014259
SyntenySpg014259
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001266 - Ribosomal protein S19e
IPR018277 - Ribosomal protein S19e, conserved site
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578553.1 40S ribosomal protein S19-3, partial [Cucurbita argyrosperma subsp. sororia]1.8e-7496.53Show/hide
Query:  AMATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGA
        +MATA+TVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGA
Subjt:  AMATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGA

Query:  IARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVAP
        IARHILQQLQEM+I+DVDPKGGR+ITSSGRRDLDQVAGRIVVAP
Subjt:  IARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVAP

KAG6593129.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]9.3e-9296.05Show/hide
Query:  STYHSSKTLELEKGGNPSSAIGAFAGLCSLNSTAMATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIY
        + Y SSKTLE EKGG+PSSAIGAFAGLCSLNSTAMATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIY
Subjt:  STYHSSKTLELEKGGNPSSAIGAFAGLCSLNSTAMATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIY

Query:  LRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAIARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVAP
        LRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAIARHILQQLQEM+I+DVDPKGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  LRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAIARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVAP

XP_022923365.1 40S ribosomal protein S19-3-like [Cucurbita moschata]7.9e-7597.9Show/hide
Query:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MATA+TVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
Subjt:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEM+I+DVDPKGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVAP

XP_022938991.1 40S ribosomal protein S19-3 [Cucurbita moschata]1.8e-7497.2Show/hide
Query:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MATA+TVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
Subjt:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEM+I+DVDPKGGR+ITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVAP

XP_022954406.1 40S ribosomal protein S19-3-like [Cucurbita moschata]3.5e-7598.6Show/hide
Query:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
Subjt:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEM+I+DVDPKGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVAP

TrEMBL top hitse value%identityAlignment
A0A6J1EBL3 40S ribosomal protein S19-3-like3.8e-7597.9Show/hide
Query:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MATA+TVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
Subjt:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEM+I+DVDPKGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVAP

A0A6J1H7M6 40S ribosomal protein S19-3-like1.7e-7598.6Show/hide
Query:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
Subjt:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEM+I+DVDPKGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVAP

A0A6J1JTL0 40S ribosomal protein S19-3-like3.8e-7597.9Show/hide
Query:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MATA+TVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
Subjt:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEM+I+DVDPKGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVAP

A0A6J1JTW8 40S ribosomal protein S19-3-like1.7e-7598.6Show/hide
Query:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
Subjt:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEM+I+DVDPKGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVAP

A0A6J1JX06 40S ribosomal protein S19-38.5e-7597.2Show/hide
Query:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MATA+TVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
Subjt:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEM+I+DVDPKGGR+ITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVAP

SwissProt top hitse value%identityAlignment
P40978 40S ribosomal protein S195.0e-6481.69Show/hide
Query:  AMATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGA
        A +TARTVKDV+PHEFVKAY+AHLKRSGK+ELP W DIVKTARFKEL PYDPDWYY RAAS+ARKIYLR G+GVG F++IYGG +RNGSRPPHFC+SSGA
Subjt:  AMATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGA

Query:  IARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVV
        I+R+ILQQLQ+M IIDVDPKGGR ITS GRRDLDQVAGR+ V
Subjt:  IARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVV

Q94613 40S ribosomal protein S191.8e-4556.72Show/hide
Query:  TVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAIARHIL
        +VKDVS HEF +A+AA LK+SGK+++P WTD VKT  FKEL+PY+PDWY++RAAS+ R +Y+R   G+G+F++IYGG +R G+ P HFC+++G+I+R +L
Subjt:  TVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAIARHIL

Query:  QQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRI
        Q L+ + I++ DP GGRR+TS GRRDLD++A +I
Subjt:  QQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRI

Q9FNP8 40S ribosomal protein S19-33.3e-6884.51Show/hide
Query:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MAT +TVKDVSPHEFVKAYAAHLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAASMARK+YLRGGLGVGAF+RIYGGSKRNGSRPPHFC+SSG +
Subjt:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVA
        ARHILQQLQ M+I+D+D KGGR+ITSSG+RDLDQVAGRI  A
Subjt:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVA

Q9LF30 40S ribosomal protein S19-21.7e-6786.33Show/hide
Query:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MAT +TVKDVSPH+FVKAYA+HLKRSGK+ELP WTDIVKT R KELAPYDPDWYY+RAASMARKIYLRGGLGVGAF+RIYGGSKRNGSRPPHFC+SSG I
Subjt:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRI
        ARHILQQL+ MSI+++D KGGRRITSSG+RDLDQVAGRI
Subjt:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRI

Q9SGA6 40S ribosomal protein S19-13.3e-6883.22Show/hide
Query:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MAT +TVKDVSPH+FVKAYA+HLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAASMARK+YLRGGLGVGAF+RIYGGSKRNGSRPPHFC+SSG I
Subjt:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQL+ M+I+++D KGGRRITSSG+RDLDQVAGRI V P
Subjt:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVAP

Arabidopsis top hitse value%identityAlignment
AT3G02080.1 Ribosomal protein S19e family protein2.4e-6983.22Show/hide
Query:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MAT +TVKDVSPH+FVKAYA+HLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAASMARK+YLRGGLGVGAF+RIYGGSKRNGSRPPHFC+SSG I
Subjt:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQL+ M+I+++D KGGRRITSSG+RDLDQVAGRI V P
Subjt:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVAP

AT5G15520.1 Ribosomal protein S19e family protein1.2e-6886.33Show/hide
Query:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MAT +TVKDVSPH+FVKAYA+HLKRSGK+ELP WTDIVKT R KELAPYDPDWYY+RAASMARKIYLRGGLGVGAF+RIYGGSKRNGSRPPHFC+SSG I
Subjt:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRI
        ARHILQQL+ MSI+++D KGGRRITSSG+RDLDQVAGRI
Subjt:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRI

AT5G61170.1 Ribosomal protein S19e family protein2.4e-6984.51Show/hide
Query:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MAT +TVKDVSPHEFVKAYAAHLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAASMARK+YLRGGLGVGAF+RIYGGSKRNGSRPPHFC+SSG +
Subjt:  MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVA
        ARHILQQLQ M+I+D+D KGGR+ITSSG+RDLDQVAGRI  A
Subjt:  ARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGCACTTATCACTCTTCGAAAACCCTAGAGCTTGAGAAAGGCGGAAACCCTAGTTCTGCGATCGGAGCTTTTGCCGGCCTTTGCTCACTGAATTCAACAGCCATGGCCAC
TGCTAGGACCGTCAAGGATGTCTCTCCTCATGAGTTCGTGAAGGCCTATGCCGCTCATCTCAAGAGATCCGGAAAGGTTGAACTTCCACCATGGACGGATATTGTTAAGA
CTGCAAGATTCAAAGAGCTTGCTCCTTACGACCCTGATTGGTATTATGTGAGAGCTGCATCCATGGCAAGGAAGATCTACTTGAGGGGAGGTCTTGGTGTTGGGGCATTT
AAGCGGATTTATGGTGGAAGCAAGAGGAACGGAAGTCGCCCTCCACACTTTTGCGAAAGCAGTGGTGCCATCGCCCGTCACATTCTACAACAGTTGCAGGAGATGAGCAT
TATTGATGTTGACCCAAAGGGTGGAAGGAGAATCACCTCAAGCGGTCGACGGGATCTTGATCAAGTCGCTGGCAGGATTGTTGTTGCCCCTTGA
mRNA sequenceShow/hide mRNA sequence
AGCACTTATCACTCTTCGAAAACCCTAGAGCTTGAGAAAGGCGGAAACCCTAGTTCTGCGATCGGAGCTTTTGCCGGCCTTTGCTCACTGAATTCAACAGCCATGGCCAC
TGCTAGGACCGTCAAGGATGTCTCTCCTCATGAGTTCGTGAAGGCCTATGCCGCTCATCTCAAGAGATCCGGAAAGGTTGAACTTCCACCATGGACGGATATTGTTAAGA
CTGCAAGATTCAAAGAGCTTGCTCCTTACGACCCTGATTGGTATTATGTGAGAGCTGCATCCATGGCAAGGAAGATCTACTTGAGGGGAGGTCTTGGTGTTGGGGCATTT
AAGCGGATTTATGGTGGAAGCAAGAGGAACGGAAGTCGCCCTCCACACTTTTGCGAAAGCAGTGGTGCCATCGCCCGTCACATTCTACAACAGTTGCAGGAGATGAGCAT
TATTGATGTTGACCCAAAGGGTGGAAGGAGAATCACCTCAAGCGGTCGACGGGATCTTGATCAAGTCGCTGGCAGGATTGTTGTTGCCCCTTGA
Protein sequenceShow/hide protein sequence
STYHSSKTLELEKGGNPSSAIGAFAGLCSLNSTAMATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAF
KRIYGGSKRNGSRPPHFCESSGAIARHILQQLQEMSIIDVDPKGGRRITSSGRRDLDQVAGRIVVAP