CuGenDBv2

Gene ID	Spg014402
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	pre-mRNA-processing factor 39-like
Genome location	scaffold3:41178067..41185159
RNA-Seq Expression	Spg014402
Synteny	Spg014402
Gene Ontology terms	GO:0000395 - mRNA 5'-splice site recognition (biological process) GO:0048510 - regulation of timing of transition from vegetative to reproductive phase (biological process) GO:0000243 - commitment complex (cellular component) GO:0005685 - U1 snRNP (cellular component) GO:0071004 - U2-type prespliceosome (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6592841.1 Pre-mRNA-processing factor 39, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-179

96.21

Show/hide

Query:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR
        +RRPEIHLF+ARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME+RLGNLE+AYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR
Subjt:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR

Query:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK
        EILDKAVEHGELSKPLIEALIHFE+IQSAAKRIDYLDSLVEKVI+PNTENA+VVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK
Subjt:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK

Query:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT
        KRLADDYLASEKAKMAKSYPSVASPAQS+MGAYPTGQNQWAASYG+QPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNP VSTSVSQAS+YATYPPT
Subjt:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT

Query:  YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG
        YPVQQQAYSAQSYAQPTAQATI PSQQPA+VAQPYYGSYYMNG
Subjt:  YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG

XP_023004938.1 pre-mRNA-processing factor 39 isoform X2 [Cucurbita maxima]

2.1e-180

96.79

Show/hide

Query:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR
        +RRPEIHLF+ARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME+RLGNLE+AYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR
Subjt:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR

Query:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK
        EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVI+PNTENA+VVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK
Subjt:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK

Query:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT
        KRLADDYLASEKAKMAKSYPSVASPAQS+MGAYPTGQNQWAASYG+QPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNP VSTSVSQASTYATYPPT
Subjt:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT

Query:  YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG
        YPVQQQAYSAQSYAQPTAQATI PSQQPA+VAQPYYGSYYMNG
Subjt:  YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG

XP_023514089.1 pre-mRNA-processing factor 39-like isoform X2 [Cucurbita pepo subsp. pepo]

1.8e-179

96.5

Show/hide

Query:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR
        +RRPEIHLF+ARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME+RLGNLE+AYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR
Subjt:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR

Query:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK
        EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVI+PNTENA+VVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFIS KSTSELK
Subjt:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK

Query:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT
        KRLADDYLASEKAKMAKSYPSVASPAQS+MGAYPTGQNQWAASYG+QPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNP VSTSVSQASTYATYPPT
Subjt:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT

Query:  YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG
        YPVQQQAYSAQSYAQPTAQATI PSQQPA+VAQPYYGSYYMNG
Subjt:  YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG

XP_038876250.1 pre-mRNA-processing factor 39 isoform X1 [Benincasa hispida]

6.2e-180

96.21

Show/hide

Query:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR
        +RRPEIHLFAARFKEQNGD+AGARASYQLVHTEISPGLLEAIIKHANME+RLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR
Subjt:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR

Query:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK
        EILDKAVEHGELSKPLIEALIHFEAIQS AKRIDYLDSLVEKVI+PNTENATV SASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK
Subjt:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK

Query:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT
        KRLADDYLASEKAKMAKSYP VASPAQSLMG YPTGQNQWAASYG+QPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT
Subjt:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT

Query:  YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG
        YP QQQAY+AQSYAQPTAQ TIAPSQQPA+VAQPYYGSYYMNG
Subjt:  YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG

XP_038876253.1 pre-mRNA-processing factor 39 isoform X3 [Benincasa hispida]

6.2e-180

96.21

Show/hide

Query:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR
        +RRPEIHLFAARFKEQNGD+AGARASYQLVHTEISPGLLEAIIKHANME+RLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR
Subjt:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR

Query:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK
        EILDKAVEHGELSKPLIEALIHFEAIQS AKRIDYLDSLVEKVI+PNTENATV SASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK
Subjt:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK

Query:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT
        KRLADDYLASEKAKMAKSYP VASPAQSLMG YPTGQNQWAASYG+QPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT
Subjt:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT

Query:  YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG
        YP QQQAY+AQSYAQPTAQ TIAPSQQPA+VAQPYYGSYYMNG
Subjt:  YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CBE2 pre-mRNA-processing factor 39 isoform X1

1.6e-178

95.63

Show/hide

Query:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR
        +RRPEIHLFAARFKEQNGDI GARASYQLVH+EISPGLLEAIIKHANME+RLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRF NLVCKNEGKAR
Subjt:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR

Query:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK
        EILDKAVEHGELSKPLIEALIHFEAIQS  KRIDYLDSLVEKVI+PNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRH KLFISHKSTSELK
Subjt:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK

Query:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT
        KRLADDYLASEKAKMAKSYPSVASPAQSLMG YPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT
Subjt:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT

Query:  YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG
        YP QQQAYSAQ+YAQPTAQAT+APSQQ A+VAQPYYGSYYMNG
Subjt:  YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG

A0A1S3CCM2 pre-mRNA-processing factor 39 isoform X4

1.6e-178

95.63

Show/hide

Query:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR
        +RRPEIHLFAARFKEQNGDI GARASYQLVH+EISPGLLEAIIKHANME+RLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRF NLVCKNEGKAR
Subjt:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR

Query:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK
        EILDKAVEHGELSKPLIEALIHFEAIQS  KRIDYLDSLVEKVI+PNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRH KLFISHKSTSELK
Subjt:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK

Query:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT
        KRLADDYLASEKAKMAKSYPSVASPAQSLMG YPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT
Subjt:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT

Query:  YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG
        YP QQQAYSAQ+YAQPTAQAT+APSQQ A+VAQPYYGSYYMNG
Subjt:  YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG

A0A6J1H6A4 pre-mRNA-processing factor 39-like

5.6e-179

95.92

Show/hide

Query:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR
        +RRPEIHLF+ RFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME+RLGNLE+AYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR
Subjt:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR

Query:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK
        EILDKAVEHGELSKPLIEALIHFE+IQSAAKRIDYLDSLVEKVI+ NTENA+VVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK
Subjt:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK

Query:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT
        KRLADDYLASEKAKMAKSYPSVASPAQS+MGAYPTGQNQWAASYG+QPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNP VSTSVSQASTYATYPPT
Subjt:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT

Query:  YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG
        YPVQQQAYSAQSYAQPTAQATI PSQQPA+VAQPYYGSYYMNG
Subjt:  YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG

A0A6J1KRS7 pre-mRNA-processing factor 39 isoform X1

9.6e-179

96.5

Show/hide

Query:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR
        +RRPEIHLF+ARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME+RLGNLE+AYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR
Subjt:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR

Query:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK
        EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVI+PNTENA+VVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK
Subjt:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK

Query:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT
        KRLADDYLASEKAKMAKSYPSVASPAQS+MGAYPTGQNQWAASYG+QPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNP VSTSVSQASTYATYPPT
Subjt:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT

Query:  YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG
        YPV QQAYSAQSYAQPTAQATI PSQQPA+VAQPYYGSYYMNG
Subjt:  YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG

A0A6J1L0W1 pre-mRNA-processing factor 39 isoform X2

1.0e-180

96.79

Show/hide

Query:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR
        +RRPEIHLF+ARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME+RLGNLE+AYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR
Subjt:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR

Query:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK
        EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVI+PNTENA+VVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK
Subjt:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK

Query:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT
        KRLADDYLASEKAKMAKSYPSVASPAQS+MGAYPTGQNQWAASYG+QPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNP VSTSVSQASTYATYPPT
Subjt:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT

Query:  YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG
        YPVQQQAYSAQSYAQPTAQATI PSQQPA+VAQPYYGSYYMNG
Subjt:  YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG

SwissProt top hits

e value

%identity

Alignment

Q1JPZ7 Pre-mRNA-processing factor 39

1.1e-09

25.93

Show/hide

Query:  RRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKARE
        ++P +HL  A F+EQ G I  AR+  + V   + PGL    ++  ++E R GN+E+A ++ + AI   R    S        + +R L  V K+ G+A++
Subjt:  RRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKARE

Query:  ILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFG-DVQSIKKAEDRHAKLFISHKSTSELK
        +L +AVE  E +  L   L+  E      +    + +  ++ +  +    + ++ S R+      ++FL  FG D+ ++  A ++H +L    +S     
Subjt:  ILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFG-DVQSIKKAEDRHAKLFISHKSTSELK

Query:  KRLADDYLASEKAKMAKS-YPSVASPAQSLMGAYPTG--------------QNQWA--ASYGVQPQAWPP
        KR A++      AK  ++   SVAS     M A   G              QN W     YG   Q +PP
Subjt:  KRLADDYLASEKAKMAKS-YPSVASPAQSLMGAYPTG--------------QNQWA--ASYGVQPQAWPP

Arabidopsis top hits

e value

%identity

Alignment

AT1G04080.1 Tetratricopeptide repeat (TPR)-like superfamily protein

1.5e-107

60.74

Show/hide

Query:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR
        +++PEIHLFAAR KEQNGDIAGARA+YQLVH+EISPGLLEA+IKHANMEYRLGNL+DA+S+YEQ IA+E+GKEHS  LPLLYAQYSRF  LV ++  KAR
Subjt:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR

Query:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK
         I+ +A++H + SKPL+EALIHFEAIQ   + IDYL+ LVEKVI P+ +   + S++ REELS I++EFL +FGDV+SIKKAED+H KLF  H+STSELK
Subjt:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK

Query:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPP--VAQAQGQQWAPGYTQSASYSGYG---STYTNPQVSTSVSQASTYA
        KR ADD+LAS++ KMAK+Y +   PAQ +  AYP  Q QW+  Y  QPQ WPP   A AQ QQW P Y Q A+Y  YG   + YT PQ  T V QA+ Y 
Subjt:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPP--VAQAQGQQWAPGYTQSASYSGYG---STYTNPQVSTSVSQASTYA

Query:  TYPPTYPVQQQAYSAQSYAQPTAQA--TIAPSQQPAAVAQP--YYGSYY
         YP       Q Y  QSYA P A A    AP QQPAA   P  YY +YY
Subjt:  TYPPTYPVQQQAYSAQSYAQPTAQA--TIAPSQQPAAVAQP--YYGSYY

AT1G04080.2 Tetratricopeptide repeat (TPR)-like superfamily protein

1.5e-107

60.74

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Query:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR
        +++PEIHLFAAR KEQNGDIAGARA+YQLVH+EISPGLLEA+IKHANMEYRLGNL+DA+S+YEQ IA+E+GKEHS  LPLLYAQYSRF  LV ++  KAR
Subjt:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR

Query:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK
         I+ +A++H + SKPL+EALIHFEAIQ   + IDYL+ LVEKVI P+ +   + S++ REELS I++EFL +FGDV+SIKKAED+H KLF  H+STSELK
Subjt:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK

Query:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPP--VAQAQGQQWAPGYTQSASYSGYG---STYTNPQVSTSVSQASTYA
        KR ADD+LAS++ KMAK+Y +   PAQ +  AYP  Q QW+  Y  QPQ WPP   A AQ QQW P Y Q A+Y  YG   + YT PQ  T V QA+ Y 
Subjt:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPP--VAQAQGQQWAPGYTQSASYSGYG---STYTNPQVSTSVSQASTYA

Query:  TYPPTYPVQQQAYSAQSYAQPTAQA--TIAPSQQPAAVAQP--YYGSYY
         YP       Q Y  QSYA P A A    AP QQPAA   P  YY +YY
Subjt:  TYPPTYPVQQQAYSAQSYAQPTAQA--TIAPSQQPAAVAQP--YYGSYY

AT1G04080.3 Tetratricopeptide repeat (TPR)-like superfamily protein

1.5e-107

60.74

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Query:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR
        +++PEIHLFAAR KEQNGDIAGARA+YQLVH+EISPGLLEA+IKHANMEYRLGNL+DA+S+YEQ IA+E+GKEHS  LPLLYAQYSRF  LV ++  KAR
Subjt:  QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAR

Query:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK
         I+ +A++H + SKPL+EALIHFEAIQ   + IDYL+ LVEKVI P+ +   + S++ REELS I++EFL +FGDV+SIKKAED+H KLF  H+STSELK
Subjt:  EILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK

Query:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPP--VAQAQGQQWAPGYTQSASYSGYG---STYTNPQVSTSVSQASTYA
        KR ADD+LAS++ KMAK+Y +   PAQ +  AYP  Q QW+  Y  QPQ WPP   A AQ QQW P Y Q A+Y  YG   + YT PQ  T V QA+ Y 
Subjt:  KRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPP--VAQAQGQQWAPGYTQSASYSGYG---STYTNPQVSTSVSQASTYA

Query:  TYPPTYPVQQQAYSAQSYAQPTAQA--TIAPSQQPAAVAQP--YYGSYY
         YP       Q Y  QSYA P A A    AP QQPAA   P  YY +YY
Subjt:  TYPPTYPVQQQAYSAQSYAQPTAQA--TIAPSQQPAAVAQP--YYGSYY

AT5G46400.1 Tetratricopeptide repeat (TPR)-like superfamily protein

3.8e-26

33.67

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Query:  IHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAI-AIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILD
        IHLF ARFKE  GD + A  +      E+  G +E + K ANME RLGN E A + Y +A+     GKE+      LY Q+SR   ++  +   A +IL 
Subjt:  IHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAI-AIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILD

Query:  KAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK
        +  E+    K L+E L+    +   ++++D LD +++K +    +++  +SA  +EE+S++++EF++L G +  ++KA  RH KLF  H + ++L+
Subjt:  KAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK

Sequences

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CDS sequence

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ATGTACATGCTCCCAAAACTTCAACAGAGACGGCCAGAGATCCATTTATTTGCTGCTCGGTTCAAGGAGCAAAATGGGGATATTGCTGGTGCTCGAGCCTCTTATCAACT
TGTGCATACTGAAATTTCACCTGGCCTTCTTGAAGCAATTATTAAGCATGCTAACATGGAATATCGTCTGGGGAACCTGGAAGATGCATACTCTGTATATGAACAGGCCA
TTGCCATCGAAAGAGGAAAAGAACATTCTCGTGCGTTGCCACTGTTATATGCTCAGTACTCAAGGTTTCTGAACTTGGTATGTAAGAATGAAGGAAAAGCTAGAGAAATT
CTGGATAAGGCAGTTGAGCATGGTGAATTATCCAAACCACTCATTGAGGCCTTGATACATTTTGAGGCAATTCAGTCAGCAGCAAAGAGAATTGATTATTTAGATTCATT
AGTTGAGAAGGTCATAATGCCCAATACAGAGAACGCAACCGTCGTGAGTGCTTCAATGAGGGAGGAATTATCGAGCATTTTCTTGGAGTTTCTGAATCTCTTTGGAGATG
TTCAGTCAATCAAGAAGGCTGAGGACAGACATGCAAAGCTATTTATTTCACATAAGAGTACATCAGAACTGAAAAAACGCCTTGCGGATGATTATCTAGCTTCTGAAAAA
GCAAAAATGGCCAAATCCTATCCTAGTGTTGCTTCACCAGCACAATCGTTGATGGGTGCTTATCCAACTGGTCAAAACCAGTGGGCAGCTAGCTATGGTGTACAACCGCA
AGCCTGGCCTCCTGTCGCTCAGGCACAGGGGCAACAATGGGCACCTGGTTATACCCAATCGGCATCGTATAGTGGGTATGGAAGCACGTACACGAATCCACAGGTGTCCA
CATCAGTTTCACAAGCCTCCACTTATGCGACATATCCTCCTACATACCCTGTCCAGCAGCAGGCATATTCTGCTCAGAGTTATGCCCAGCCGACTGCTCAAGCGACAATA
GCACCATCGCAGCAGCCAGCTGCAGTCGCTCAGCCGTATTACGGAAGTTACTATATGAATGGATGA

mRNA sequence

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Protein sequence

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MYMLPKLQQRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREI
LDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEK
AKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTAQATI
APSQQPAAVAQPYYGSYYMNG

Spg014402 (gene) of Sponge gourd (cylindrica) v1 genome