CuGenDBv2

Gene ID	Spg014447
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	S-protein homolog
Genome location	scaffold3:40811835..40813734
RNA-Seq Expression	Spg014447
Synteny	Spg014447
Gene Ontology terms	GO:0060320 - rejection of self pollen (biological process) GO:0005576 - extracellular region (cellular component)
InterPro domains	IPR010264 - Plant self-incompatibility S1

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0067970.1 uncharacterized protein E6C27_scaffold138G001560 [Cucumis melo var. makuwa]

2.1e-25

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Query:  MYEEKKHLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLENETLLVHCKSKDDDLGNQNLAAKGDEFHWTFKVERF
        MYEEK +L +V+LLV  A+AVVQPC AVPLPLP W+IHVVNGL NETLLVHCKSKDDDLG  NL +KG+EF WTFKV  F
Subjt:  MYEEKKHLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLENETLLVHCKSKDDDLGNQNLAAKGDEFHWTFKVERF

KAE8646232.1 hypothetical protein Csa_016625, partial [Cucumis sativus]

1.1e-18

70.67

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Query:  HLAMV-LLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLENETLLVHCKSKDDDLGNQNLAAKGDEFHWTFKVERF
        HLA+V LL+V  A+ VVQPCMAVP+P P W IHVVNGL NETLLVHCKS DDDLG Q+L  +G EFHWTF+V  F
Subjt:  HLAMV-LLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLENETLLVHCKSKDDDLGNQNLAAKGDEFHWTFKVERF

XP_004139722.1 S-protein homolog 1-like [Cucumis sativus]

1.1e-18

70.67

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Query:  HLAMV-LLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLENETLLVHCKSKDDDLGNQNLAAKGDEFHWTFKVERF
        HLA+V LL+V  A+ VVQPCMAVP+P P W IHVVNGL NETLLVHCKS DDDLG Q+L  +G EFHWTF+V  F
Subjt:  HLAMV-LLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLENETLLVHCKSKDDDLGNQNLAAKGDEFHWTFKVERF

XP_008461539.1 PREDICTED: uncharacterized protein LOC103500111 [Cucumis melo]

6.9e-21

67.5

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Query:  MYEEKKHLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLENETLLVHCKSKDDDLGNQNLAAKGDEFHWTFKVERF
        MYE+   LAM LLLV  A+ +VQP  AVPLPLP W IHVVNGL N+TL VHCKSKDDDLGN  L+ KG E  WTFKV  F
Subjt:  MYEEKKHLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLENETLLVHCKSKDDDLGNQNLAAKGDEFHWTFKVERF

XP_008462114.1 PREDICTED: uncharacterized protein LOC103500542 [Cucumis melo]

7.6e-20

71.62

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Query:  HLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLENETLLVHCKSKDDDLGNQNLAAKGDEFHWTFKVERF
        HLA+V LLV  A+ VVQPC AVP+P P W IHVVNGL NETLLVHCKS+DDDLG Q+L  KG EFHWTF+V  F
Subjt:  HLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLENETLLVHCKSKDDDLGNQNLAAKGDEFHWTFKVERF

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CEQ0 S-protein homolog

3.3e-21

67.5

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Query:  MYEEKKHLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLENETLLVHCKSKDDDLGNQNLAAKGDEFHWTFKVERF
        MYE+   LAM LLLV  A+ +VQP  AVPLPLP W IHVVNGL N+TL VHCKSKDDDLGN  L+ KG E  WTFKV  F
Subjt:  MYEEKKHLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLENETLLVHCKSKDDDLGNQNLAAKGDEFHWTFKVERF

A0A1S3CG89 S-protein homolog

3.7e-20

71.62

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Query:  HLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLENETLLVHCKSKDDDLGNQNLAAKGDEFHWTFKVERF
        HLA+V LLV  A+ VVQPC AVP+P P W IHVVNGL NETLLVHCKS+DDDLG Q+L  KG EFHWTF+V  F
Subjt:  HLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLENETLLVHCKSKDDDLGNQNLAAKGDEFHWTFKVERF

A0A5A7VL75 S-protein homolog

1.0e-25

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Query:  MYEEKKHLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLENETLLVHCKSKDDDLGNQNLAAKGDEFHWTFKVERF
        MYEEK +L +V+LLV  A+AVVQPC AVPLPLP W+IHVVNGL NETLLVHCKSKDDDLG  NL +KG+EF WTFKV  F
Subjt:  MYEEKKHLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLENETLLVHCKSKDDDLGNQNLAAKGDEFHWTFKVERF

A0A5D3C8F8 Plant self-incompatibility S1

1.8e-14

74.14

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Query:  HLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLENETLLVHCKSKDDDLGNQNL
        HLA+V LLV  A+ VVQPC AVP+P P W IHVVNGL NETLLVHCKS+DDDLG Q+L
Subjt:  HLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLENETLLVHCKSKDDDLGNQNL

A0A6J1CPC6 S-protein homolog

1.5e-13

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Query:  MYEEKKHLAMVLLLVSAALAVVQPCMAVPLP---LPTWQIHVVNGLENETLLVHCKSKDDDLGNQNLAAKGDEFHWTFKV
        MY + + + +V+ LVS   AV+Q   A  L    LP W IHVVNGL   TL VHCKSKDDDLG  NL  +GDEF WTF+V
Subjt:  MYEEKKHLAMVLLLVSAALAVVQPCMAVPLP---LPTWQIHVVNGLENETLLVHCKSKDDDLGNQNLAAKGDEFHWTFKV

SwissProt top hits

e value

%identity

Alignment

F4JLS0 S-protein homolog 1

1.1e-05

57.14

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Query:  WQIHVVNGL-ENETLLVHCKSKDDDLGNQNLAAKGDEFHWTF
        WQ+ VVNGL   ETL +HCKSK+DDLG  NL  + + F W F
Subjt:  WQIHVVNGL-ENETLLVHCKSKDDDLGNQNLAAKGDEFHWTF

Q2HQ46 S-protein homolog 74

7.2e-05

54.76

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Query:  WQIHVVNGL-ENETLLVHCKSKDDDLGNQNLAAKGDEFHWTF
        WQ+ V NGL   ETL +HCKSK++DLG+ NL    D F W F
Subjt:  WQIHVVNGL-ENETLLVHCKSKDDDLGNQNLAAKGDEFHWTF

Arabidopsis top hits

e value

%identity

Alignment

AT4G16295.1 S-protein homologue 1

7.9e-07

57.14

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Query:  WQIHVVNGL-ENETLLVHCKSKDDDLGNQNLAAKGDEFHWTF
        WQ+ VVNGL   ETL +HCKSK+DDLG  NL  + + F W F
Subjt:  WQIHVVNGL-ENETLLVHCKSKDDDLGNQNLAAKGDEFHWTF

AT4G29035.1 Plant self-incompatibility protein S1 family

5.1e-06

54.76

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Query:  WQIHVVNGL-ENETLLVHCKSKDDDLGNQNLAAKGDEFHWTF
        WQ+ V NGL   ETL +HCKSK++DLG+ NL    D F W F
Subjt:  WQIHVVNGL-ENETLLVHCKSKDDDLGNQNLAAKGDEFHWTF

AT5G12070.1 Plant self-incompatibility protein S1 family

3.7e-04

33.75

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Query:  MGAMYEEKKHLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGL-ENETLLVHCKSKDDDLGNQNLAAKGDEFHWTFK
        M  M + + H+ ++ LL+  A + V+P   +        + + N L +  TL +HCKS DDDLG + LA  G    W+FK
Subjt:  MGAMYEEKKHLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGL-ENETLLVHCKSKDDDLGNQNLAAKGDEFHWTFK

Sequences

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CDS sequence

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ATGCCGAGGCCGAGGAGAGAGTTAAGCCCATTTCGGGCTGGGTTCTATTCGTGGGCTTACCTGCTTCGGACCCAGAGCCGCTTCTGGGTTATGGGAGCAATGTATGAAGA
AAAGAAGCACTTGGCAATGGTTCTCTTACTTGTCTCGGCGGCTCTGGCGGTGGTTCAGCCATGCATGGCCGTTCCACTGCCACTCCCAACGTGGCAAATTCATGTGGTCA
ATGGGCTCGAGAACGAAACCCTTTTGGTGCATTGCAAGTCCAAGGACGATGATTTGGGTAACCAGAATTTGGCTGCCAAAGGAGATGAATTCCATTGGACTTTTAAGGTT
GAGAGGTTTTGTGGAGGGGTGTTCGACTTTGAGCCTAAGTCTCAAAAGGATATTCTTTCTCAAAATATGTTCACAGCCACGATGTGGAACAATCTGAAATGA

mRNA sequence

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Protein sequence

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MPRPRRELSPFRAGFYSWAYLLRTQSRFWVMGAMYEEKKHLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLENETLLVHCKSKDDDLGNQNLAAKGDEFHWTFKV
ERFCGGVFDFEPKSQKDILSQNMFTATMWNNLK

Spg014447 (gene) of Sponge gourd (cylindrica) v1 genome