; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg014467 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg014467
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionATP-dependent RNA helicase DDX11
Genome locationscaffold3:48123755..48125297
RNA-Seq ExpressionSpg014467
SyntenySpg014467
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016902859.1 PREDICTED: uncharacterized protein LOC107991904 [Cucumis melo]9.9e-6985.21Show/hide
Query:  SKGKPPHTHPTDRLYIDFYDEWQSTLHKAAKRSIDSGSVVTSKECMKQEEDTNVAKENQSPPRSRREKAVKEKKKPGIAHLRKGDVRNSSTRSDGLVQKM
        SKGKP HTHPTDRLYIDFYDEWQSTL KAAKRSID GSV+ SKE +KQ EDT VA   QSPPRS++EKAVKEKKKPG +HLRKGDV+NSSTRS+GLV+KM
Subjt:  SKGKPPHTHPTDRLYIDFYDEWQSTLHKAAKRSIDSGSVVTSKECMKQEEDTNVAKENQSPPRSRREKAVKEKKKPGIAHLRKGDVRNSSTRSDGLVQKM

Query:  KELEMLDRGDMEQELDIEEAIHYYSRLKSPVYLEIVDKFFMDIHSECSVTKPSARSMNSSKRRMGSMRL
        KELEMLDR DMEQELDIEEAIHYYSRL+SPVYLEIVDKFFMD+HSE SV +PSARSMNSSKRRMGSMRL
Subjt:  KELEMLDRGDMEQELDIEEAIHYYSRLKSPVYLEIVDKFFMDIHSECSVTKPSARSMNSSKRRMGSMRL

XP_022954247.1 uncharacterized protein LOC111456559 [Cucurbita moschata]3.2e-6785.29Show/hide
Query:  SKGKPPHTHPTDRLYIDFYDEWQSTLHKAAKRSIDSGSV-VTSKECMKQEEDTNVAKENQSPPRSRREKAVKEKKKPGIAHLRKGDVRNSSTRSDGLVQK
        SK KP HTHPTDRLYIDFYDEWQS L K+AKRSID GSV +T+K+ MKQ EDTNVAK  QSPPRSR+EKAVKEKKKPG  HLRKGDV+NSS RS+GL QK
Subjt:  SKGKPPHTHPTDRLYIDFYDEWQSTLHKAAKRSIDSGSV-VTSKECMKQEEDTNVAKENQSPPRSRREKAVKEKKKPGIAHLRKGDVRNSSTRSDGLVQK

Query:  MKELEMLDRGDMEQELDIEEAIHYYSRLKSPVYLEIVDKFFMDIHSECSVTKPSARSMNSSKRRMGSMRL
        MKELEMLDRGDMEQELDIEEAIHYYSRL SPVYLEIVDKFFMDIHSE SV +PSARSMNSSKRRMGSMRL
Subjt:  MKELEMLDRGDMEQELDIEEAIHYYSRLKSPVYLEIVDKFFMDIHSECSVTKPSARSMNSSKRRMGSMRL

XP_023548201.1 uncharacterized protein LOC111806912 [Cucurbita pepo subsp. pepo]5.4e-6784.02Show/hide
Query:  SKGKPPHTHPTDRLYIDFYDEWQSTLHKAAKRSIDSGSVVTSKECMKQEEDTNVAKENQSPPRSRREKAVKEKKKPGIAHLRKGDVRNSSTRSDGLVQKM
        SK KP HTHPTDRLYIDFYDEWQS L K+AK++ID GSV+T+K+ MKQ EDTNVAK  QSPPRSR+EKAVKEKKKPG  HLRKGDV+NSS RS+GL QKM
Subjt:  SKGKPPHTHPTDRLYIDFYDEWQSTLHKAAKRSIDSGSVVTSKECMKQEEDTNVAKENQSPPRSRREKAVKEKKKPGIAHLRKGDVRNSSTRSDGLVQKM

Query:  KELEMLDRGDMEQELDIEEAIHYYSRLKSPVYLEIVDKFFMDIHSECSVTKPSARSMNSSKRRMGSMRL
        KELEMLDR DMEQELDIEEAIHYYSRL SPVYLEIVDKFFMDIHSE SV +PSARSMNSSKRRMGSMRL
Subjt:  KELEMLDRGDMEQELDIEEAIHYYSRLKSPVYLEIVDKFFMDIHSECSVTKPSARSMNSSKRRMGSMRL

XP_031744975.1 uncharacterized protein LOC116405196 [Cucumis sativus]3.8e-6883.43Show/hide
Query:  SKGKPPHTHPTDRLYIDFYDEWQSTLHKAAKRSIDSGSVVTSKECMKQEEDTNVAKENQSPPRSRREKAVKEKKKPGIAHLRKGDVRNSSTRSDGLVQKM
        SKGKP HTHPTDRLYIDFYDEWQSTL KAAKRSID GS++ SKE +KQ EDTNVA   QSPPRS++EKAVKEKKKPG +HLRKGDV+N+STRS+GLV+KM
Subjt:  SKGKPPHTHPTDRLYIDFYDEWQSTLHKAAKRSIDSGSVVTSKECMKQEEDTNVAKENQSPPRSRREKAVKEKKKPGIAHLRKGDVRNSSTRSDGLVQKM

Query:  KELEMLDRGDMEQELDIEEAIHYYSRLKSPVYLEIVDKFFMDIHSECSVTKPSARSMNSSKRRMGSMRL
        KELEMLDR DMEQELDIEEAIHYYSRL+SPVYLEIVDKFFMD+HSE SV +PSARS+NSSKRR+GSMRL
Subjt:  KELEMLDRGDMEQELDIEEAIHYYSRLKSPVYLEIVDKFFMDIHSECSVTKPSARSMNSSKRRMGSMRL

XP_038900276.1 uncharacterized protein LOC120087356 [Benincasa hispida]9.9e-6984.71Show/hide
Query:  SKGKP-PHTHPTDRLYIDFYDEWQSTLHKAAKRSIDSGSVVTSKECMKQEEDTNVAKENQSPPRSRREKAVKEKKKPGIAHLRKGDVRNSSTRSDGLVQK
        SKGKP  HTHPTDRLYIDFYDEWQSTL KAAKRS+D G+V+TSKE +KQ EDTNVAK  QSPPRSR+EK VKEKKKPG +HLRKGDV+NSSTRS+GLVQK
Subjt:  SKGKP-PHTHPTDRLYIDFYDEWQSTLHKAAKRSIDSGSVVTSKECMKQEEDTNVAKENQSPPRSRREKAVKEKKKPGIAHLRKGDVRNSSTRSDGLVQK

Query:  MKELEMLDRGDMEQELDIEEAIHYYSRLKSPVYLEIVDKFFMDIHSECSVTKPSARSMNSSKRRMGSMRL
        MKELEMLDRGDMEQELDIEEAIHYYSRL+SPVYLEIVDKFFMD+HSE SV +PS RS+NSSKRR+GSMRL
Subjt:  MKELEMLDRGDMEQELDIEEAIHYYSRLKSPVYLEIVDKFFMDIHSECSVTKPSARSMNSSKRRMGSMRL

TrEMBL top hitse value%identityAlignment
A0A0A0KAF5 Uncharacterized protein1.8e-6883.43Show/hide
Query:  SKGKPPHTHPTDRLYIDFYDEWQSTLHKAAKRSIDSGSVVTSKECMKQEEDTNVAKENQSPPRSRREKAVKEKKKPGIAHLRKGDVRNSSTRSDGLVQKM
        SKGKP HTHPTDRLYIDFYDEWQSTL KAAKRSID GS++ SKE +KQ EDTNVA   QSPPRS++EKAVKEKKKPG +HLRKGDV+N+STRS+GLV+KM
Subjt:  SKGKPPHTHPTDRLYIDFYDEWQSTLHKAAKRSIDSGSVVTSKECMKQEEDTNVAKENQSPPRSRREKAVKEKKKPGIAHLRKGDVRNSSTRSDGLVQKM

Query:  KELEMLDRGDMEQELDIEEAIHYYSRLKSPVYLEIVDKFFMDIHSECSVTKPSARSMNSSKRRMGSMRL
        KELEMLDR DMEQELDIEEAIHYYSRL+SPVYLEIVDKFFMD+HSE SV +PSARS+NSSKRR+GSMRL
Subjt:  KELEMLDRGDMEQELDIEEAIHYYSRLKSPVYLEIVDKFFMDIHSECSVTKPSARSMNSSKRRMGSMRL

A0A1S4E3Q5 uncharacterized protein LOC1079919044.8e-6985.21Show/hide
Query:  SKGKPPHTHPTDRLYIDFYDEWQSTLHKAAKRSIDSGSVVTSKECMKQEEDTNVAKENQSPPRSRREKAVKEKKKPGIAHLRKGDVRNSSTRSDGLVQKM
        SKGKP HTHPTDRLYIDFYDEWQSTL KAAKRSID GSV+ SKE +KQ EDT VA   QSPPRS++EKAVKEKKKPG +HLRKGDV+NSSTRS+GLV+KM
Subjt:  SKGKPPHTHPTDRLYIDFYDEWQSTLHKAAKRSIDSGSVVTSKECMKQEEDTNVAKENQSPPRSRREKAVKEKKKPGIAHLRKGDVRNSSTRSDGLVQKM

Query:  KELEMLDRGDMEQELDIEEAIHYYSRLKSPVYLEIVDKFFMDIHSECSVTKPSARSMNSSKRRMGSMRL
        KELEMLDR DMEQELDIEEAIHYYSRL+SPVYLEIVDKFFMD+HSE SV +PSARSMNSSKRRMGSMRL
Subjt:  KELEMLDRGDMEQELDIEEAIHYYSRLKSPVYLEIVDKFFMDIHSECSVTKPSARSMNSSKRRMGSMRL

A0A5D3BXY4 Putative ATP-dependent RNA helicase DDX114.8e-6985.21Show/hide
Query:  SKGKPPHTHPTDRLYIDFYDEWQSTLHKAAKRSIDSGSVVTSKECMKQEEDTNVAKENQSPPRSRREKAVKEKKKPGIAHLRKGDVRNSSTRSDGLVQKM
        SKGKP HTHPTDRLYIDFYDEWQSTL KAAKRSID GSV+ SKE +KQ EDT VA   QSPPRS++EKAVKEKKKPG +HLRKGDV+NSSTRS+GLV+KM
Subjt:  SKGKPPHTHPTDRLYIDFYDEWQSTLHKAAKRSIDSGSVVTSKECMKQEEDTNVAKENQSPPRSRREKAVKEKKKPGIAHLRKGDVRNSSTRSDGLVQKM

Query:  KELEMLDRGDMEQELDIEEAIHYYSRLKSPVYLEIVDKFFMDIHSECSVTKPSARSMNSSKRRMGSMRL
        KELEMLDR DMEQELDIEEAIHYYSRL+SPVYLEIVDKFFMD+HSE SV +PSARSMNSSKRRMGSMRL
Subjt:  KELEMLDRGDMEQELDIEEAIHYYSRLKSPVYLEIVDKFFMDIHSECSVTKPSARSMNSSKRRMGSMRL

A0A6J1GQI6 uncharacterized protein LOC1114565591.5e-6785.29Show/hide
Query:  SKGKPPHTHPTDRLYIDFYDEWQSTLHKAAKRSIDSGSV-VTSKECMKQEEDTNVAKENQSPPRSRREKAVKEKKKPGIAHLRKGDVRNSSTRSDGLVQK
        SK KP HTHPTDRLYIDFYDEWQS L K+AKRSID GSV +T+K+ MKQ EDTNVAK  QSPPRSR+EKAVKEKKKPG  HLRKGDV+NSS RS+GL QK
Subjt:  SKGKPPHTHPTDRLYIDFYDEWQSTLHKAAKRSIDSGSV-VTSKECMKQEEDTNVAKENQSPPRSRREKAVKEKKKPGIAHLRKGDVRNSSTRSDGLVQK

Query:  MKELEMLDRGDMEQELDIEEAIHYYSRLKSPVYLEIVDKFFMDIHSECSVTKPSARSMNSSKRRMGSMRL
        MKELEMLDRGDMEQELDIEEAIHYYSRL SPVYLEIVDKFFMDIHSE SV +PSARSMNSSKRRMGSMRL
Subjt:  MKELEMLDRGDMEQELDIEEAIHYYSRLKSPVYLEIVDKFFMDIHSECSVTKPSARSMNSSKRRMGSMRL

A0A6J1JPP9 uncharacterized protein LOC1114887162.9e-6684.02Show/hide
Query:  SKGKPPHTHPTDRLYIDFYDEWQSTLHKAAKRSIDSGSVVTSKECMKQEEDTNVAKENQSPPRSRREKAVKEKKKPGIAHLRKGDVRNSSTRSDGLVQKM
        SK KP HTHPT+RLYIDFYDEWQS L K+AK+SID GSV+T+K+ MKQ EDTNVAK  QSPPRSR+EKAVKE KKPG  HLRKGDV+NSS RS+GL QKM
Subjt:  SKGKPPHTHPTDRLYIDFYDEWQSTLHKAAKRSIDSGSVVTSKECMKQEEDTNVAKENQSPPRSRREKAVKEKKKPGIAHLRKGDVRNSSTRSDGLVQKM

Query:  KELEMLDRGDMEQELDIEEAIHYYSRLKSPVYLEIVDKFFMDIHSECSVTKPSARSMNSSKRRMGSMRL
        KELEMLDRGDMEQELDIEEAIHYYSRL SPVYLEIVDKFFMDIHSE SV +PSARSMNSSKRRMGSMRL
Subjt:  KELEMLDRGDMEQELDIEEAIHYYSRLKSPVYLEIVDKFFMDIHSECSVTKPSARSMNSSKRRMGSMRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15260.1 unknown protein5.7e-1447.56Show/hide
Query:  NSSTRSDGLVQKMKELEMLDRGDMEQELDIEEAIHYYSRLKSPVYLEIVDKFFMDIHSECSVTKPSARSMNSSKRRMGSMRL
        ++  R D L QKMK+L M+D  D++  LD+ EA+  YS ++SPVYL+IVD FF D++ E S  + SA+ +N S+R+ GS RL
Subjt:  NSSTRSDGLVQKMKELEMLDRGDMEQELDIEEAIHYYSRLKSPVYLEIVDKFFMDIHSECSVTKPSARSMNSSKRRMGSMRL

AT3G16070.1 unknown protein1.3e-1032.09Show/hide
Query:  DRLYIDFYDEWQSTLHKAAKRSIDSGSVVTSKECMKQEEDTNVAKENQSPPRSRREKAVKEKKKPGIAHLRKGDVRNSSTRSDGLVQKMKELEMLDRGDM
        D +Y  F + W+S L  + +     G +    +  +QE+   V K       S R+                          D + +K+ E+ M +  D+
Subjt:  DRLYIDFYDEWQSTLHKAAKRSIDSGSVVTSKECMKQEEDTNVAKENQSPPRSRREKAVKEKKKPGIAHLRKGDVRNSSTRSDGLVQKMKELEMLDRGDM

Query:  EQELDIEEAIHYYSRLKSPVYLEIVDKFFMDIHS
        EQ LD+EEA+HYYSR+ SPVYL IVDKFF D++S
Subjt:  EQELDIEEAIHYYSRLKSPVYLEIVDKFFMDIHS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTAATAACCACCTGATACAAATTCGAGGCAGTTTTGCAGGTAGTCAAAAACGAAGCACTCAAGCTCATGGGATTCCGTGCAACCTGTTATCAAAGTTCAAGCG
GTTAAGCAAAGGAAAGCCACCGCATACCCATCCAACAGATAGACTCTACATTGATTTTTATGATGAGTGGCAGTCCACACTGCACAAAGCAGCAAAGAGAAGCATTGACA
GTGGCAGTGTGGTGACATCCAAGGAATGCATGAAGCAAGAAGAAGACACAAATGTTGCAAAAGAAAACCAAAGTCCTCCAAGGAGCAGACGAGAGAAGGCTGTGAAAGAG
AAGAAGAAACCAGGAATTGCCCATCTCAGAAAAGGTGATGTTAGAAACAGTAGTACAAGAAGTGATGGGTTAGTGCAAAAAATGAAGGAATTGGAGATGTTGGATAGGGG
AGATATGGAACAAGAGTTGGATATTGAAGAGGCAATTCATTATTACTCTCGCCTCAAAAGTCCTGTTTATCTTGAAATTGTGGACAAGTTTTTCATGGACATACACTCTG
AATGCTCTGTTACTAAACCTTCTGCTAGGAGTATGAACAGCTCAAAGAGGAGAATGGGGTCCATGAGATTATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCTAATAACCACCTGATACAAATTCGAGGCAGTTTTGCAGGTAGTCAAAAACGAAGCACTCAAGCTCATGGGATTCCGTGCAACCTGTTATCAAAGTTCAAGCG
GTTAAGCAAAGGAAAGCCACCGCATACCCATCCAACAGATAGACTCTACATTGATTTTTATGATGAGTGGCAGTCCACACTGCACAAAGCAGCAAAGAGAAGCATTGACA
GTGGCAGTGTGGTGACATCCAAGGAATGCATGAAGCAAGAAGAAGACACAAATGTTGCAAAAGAAAACCAAAGTCCTCCAAGGAGCAGACGAGAGAAGGCTGTGAAAGAG
AAGAAGAAACCAGGAATTGCCCATCTCAGAAAAGGTGATGTTAGAAACAGTAGTACAAGAAGTGATGGGTTAGTGCAAAAAATGAAGGAATTGGAGATGTTGGATAGGGG
AGATATGGAACAAGAGTTGGATATTGAAGAGGCAATTCATTATTACTCTCGCCTCAAAAGTCCTGTTTATCTTGAAATTGTGGACAAGTTTTTCATGGACATACACTCTG
AATGCTCTGTTACTAAACCTTCTGCTAGGAGTATGAACAGCTCAAAGAGGAGAATGGGGTCCATGAGATTATAG
Protein sequenceShow/hide protein sequence
MSSNNHLIQIRGSFAGSQKRSTQAHGIPCNLLSKFKRLSKGKPPHTHPTDRLYIDFYDEWQSTLHKAAKRSIDSGSVVTSKECMKQEEDTNVAKENQSPPRSRREKAVKE
KKKPGIAHLRKGDVRNSSTRSDGLVQKMKELEMLDRGDMEQELDIEEAIHYYSRLKSPVYLEIVDKFFMDIHSECSVTKPSARSMNSSKRRMGSMRL