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Spg014481 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg014481
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionBromo domain-containing protein
Genome locationscaffold3:29849007..29852447
RNA-Seq ExpressionSpg014481
SyntenySpg014481
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049895.1 uncharacterized protein E6C27_scaffold13G00470 [Cucumis melo var. makuwa]1.1e-1877.46Show/hide
Query:  ELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQRLQESE
        ELK  ASQV++G LDMNED+IFVQVFGPEKHG VRGYGVGVTP ELF SSS V DLE  LNE E RL ESE
Subjt:  ELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQRLQESE

KAA0056079.1 bromodomain-containing factor 1-like isoform X2 [Cucumis melo var. makuwa]1.9e-1878.12Show/hide
Query:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQ
        +KSYASQV+DGTLDMN+D+IFVQ+ GPEKH  VRGYGVGV  SELFGSSS V DLERRLNES++
Subjt:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQ

KAF3956246.1 hypothetical protein CMV_018610 [Castanea mollissima]1.5e-1547.15Show/hide
Query:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSS-NVRDLERRLNESEQRLQESEQQR-------KVEVQALKD-------QIV
        L++  +QV +G L +++D++FV+VFGPE+HGRVRGYG GVTP+ L+GSSS  + DLE+RL ESEQ+  ESE +R       K EV+ LK        Q+V
Subjt:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSS-NVRDLERRLNESEQRLQESEQQR-------KVEVQALKD-------QIV

Query:  ELENRFEDKFQTMMAEMRKQFAN
        E    FE++  + MAE R  + N
Subjt:  ELENRFEDKFQTMMAEMRKQFAN

XP_008457059.1 PREDICTED: uncharacterized protein LOC103496828 [Cucumis melo]2.2e-1979.69Show/hide
Query:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQ
        +KSYASQV+DGTLDMN+D+IFVQ+FGPEKH  VRGYGVGV  SELFGSSS V DLERRLNES++
Subjt:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQ

XP_038904040.1 uncharacterized protein LOC120090445 [Benincasa hispida]1.2e-3675.42Show/hide
Query:  SELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQRLQESEQQRK-------VEVQALKDQIVELENRF
        S+LKSYASQV+DGTLDMNEDE FV+VFGPEKHG V GYGVGVTPSELFGSSS +RD ERRLNESEQRLQE EQQRK       +EV+ LK QI ELENRF
Subjt:  SELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQRLQESEQQRK-------VEVQALKDQIVELENRF

Query:  EDKFQTMMAEMRKQFANN
        ED+FQ MMAEM K+F ++
Subjt:  EDKFQTMMAEMRKQFANN

TrEMBL top hitse value%identityAlignment
A0A1S3C480 uncharacterized protein LOC1034968281.1e-1979.69Show/hide
Query:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQ
        +KSYASQV+DGTLDMN+D+IFVQ+FGPEKH  VRGYGVGV  SELFGSSS V DLERRLNES++
Subjt:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQ

A0A2N9H1H2 Uncharacterized protein2.4e-1645.13Show/hide
Query:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSN-VRDLERRLNESEQRLQESEQQRKVEVQALKDQIVELENRFED------
        L+S+ +QV +G+L M+ED++FV+VFGPE HGRVRGYG GVT ++L+GSSS+ + DLE+RL+ESEQ   E+      +V+ L++Q+++L++  E+      
Subjt:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSN-VRDLERRLNESEQRLQESEQQRKVEVQALKDQIVELENRFED------

Query:  ----KFQTMMAEM
            + +T+MA+M
Subjt:  ----KFQTMMAEM

A0A2N9HCP8 Uncharacterized protein3.2e-1648.48Show/hide
Query:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSN-VRDLERRLNESEQRLQESEQQRKVEVQALKDQIVELENRFEDKFQTM
        L+S  +QV +G+L M+ED++FV+VFGPE+HGRVRGYG GVT ++L+GSSS+ + DLE+RL ESEQ   E+  +   +V+ L++Q+++L++  E++   M
Subjt:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSN-VRDLERRLNESEQRLQESEQQRKVEVQALKDQIVELENRFEDKFQTM

A0A5A7U8E9 Uncharacterized protein5.3e-1977.46Show/hide
Query:  ELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQRLQESE
        ELK  ASQV++G LDMNED+IFVQVFGPEKHG VRGYGVGVTP ELF SSS V DLE  LNE E RL ESE
Subjt:  ELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQRLQESE

A0A5D3BP34 Bromodomain-containing factor 1-like isoform X29.0e-1978.12Show/hide
Query:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQ
        +KSYASQV+DGTLDMN+D+IFVQ+ GPEKH  VRGYGVGV  SELFGSSS V DLERRLNES++
Subjt:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCTCAGCATTCGAATTCGAACGGTATTCTATTCTATTCTATTCTATTTCTCTCTTACGCTTCTCAGTTTCATTCATTCAATTCTGACATTAATCTGGTTTCAAG
CTATGGCGATCGTGCTTATGGGAGTCAGCGTACTATTGGTGCGATGCTGGCCAACTCCATGGACTCCACTTTTCTTGATGCTGATGATTTTCACCCAATTTCTAACAAGG
ATGAAAAGCCTGCCAGCTGGGTTAGAAATGTCCAATGGCTGCTGTGGAGAATGGCTCAAATGGAGTCAAATCGGTTCATTTCCTGTGGCAGCCGAAAGAACAGACTAATG
AAAACAGGCAAGCCCACTCTTTGCGGAAATTTTGAATGTGCTTCAAAGATCAATCAATCGGAACTCAAATCATATGCTTCTCAAGTAGTTGATGGTACACTTGACATGAA
CGAGGATGAGATTTTTGTACAAGTTTTTGGACCAGAGAAACATGGACGTGTTCGTGGTTATGGAGTAGGTGTTACTCCTTCTGAGCTATTTGGATCATCTTCTAATGTAC
GTGATCTTGAGCGTCGTCTTAATGAGTCTGAACAACGTCTTCAAGAATCTGAACAACAAAGAAAAGTCGAGGTACAAGCACTAAAAGATCAAATTGTCGAACTAGAAAAT
CGTTTTGAGGATAAATTTCAAACAATGATGGCAGAGATGCGTAAACAATTTGCTAATAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACTCTCAGCATTCGAATTCGAACGGTATTCTATTCTATTCTATTCTATTTCTCTCTTACGCTTCTCAGTTTCATTCATTCAATTCTGACATTAATCTGGTTTCAAG
CTATGGCGATCGTGCTTATGGGAGTCAGCGTACTATTGGTGCGATGCTGGCCAACTCCATGGACTCCACTTTTCTTGATGCTGATGATTTTCACCCAATTTCTAACAAGG
ATGAAAAGCCTGCCAGCTGGGTTAGAAATGTCCAATGGCTGCTGTGGAGAATGGCTCAAATGGAGTCAAATCGGTTCATTTCCTGTGGCAGCCGAAAGAACAGACTAATG
AAAACAGGCAAGCCCACTCTTTGCGGAAATTTTGAATGTGCTTCAAAGATCAATCAATCGGAACTCAAATCATATGCTTCTCAAGTAGTTGATGGTACACTTGACATGAA
CGAGGATGAGATTTTTGTACAAGTTTTTGGACCAGAGAAACATGGACGTGTTCGTGGTTATGGAGTAGGTGTTACTCCTTCTGAGCTATTTGGATCATCTTCTAATGTAC
GTGATCTTGAGCGTCGTCTTAATGAGTCTGAACAACGTCTTCAAGAATCTGAACAACAAAGAAAAGTCGAGGTACAAGCACTAAAAGATCAAATTGTCGAACTAGAAAAT
CGTTTTGAGGATAAATTTCAAACAATGATGGCAGAGATGCGTAAACAATTTGCTAATAATTGA
Protein sequenceShow/hide protein sequence
MDSQHSNSNGILFYSILFLSYASQFHSFNSDINLVSSYGDRAYGSQRTIGAMLANSMDSTFLDADDFHPISNKDEKPASWVRNVQWLLWRMAQMESNRFISCGSRKNRLM
KTGKPTLCGNFECASKINQSELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQRLQESEQQRKVEVQALKDQIVELEN
RFEDKFQTMMAEMRKQFANN