; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg014537 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg014537
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Genome locationscaffold3:38183760..38190558
RNA-Seq ExpressionSpg014537
SyntenySpg014537
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5560977.1 hypothetical protein RHGRI_004113 [Rhododendron griersonianum]1.4e-2254.1Show/hide
Query:  LGSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEE-----GVFSLSSRLSHGAWEAMAYVSFRPPQLL
        + S++ KEKLGE+I ALQQLVSPYGKTDTASVLLEAMEYI FLHEQ+ VL APYL+  PT+ +Q E+       +++ ++ +H  + A AYV  +     
Subjt:  LGSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEE-----GVFSLSSRLSHGAWEAMAYVSFRPPQLL

Query:  KLLAAMVQTSGLLSRPLPPALR
         L+AA VQ SGL SRP  P +R
Subjt:  KLLAAMVQTSGLLSRPLPPALR

THG09380.1 hypothetical protein TEA_013796 [Camellia sinensis var. sinensis]2.1e-2664.1Show/hide
Query:  LGSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSRLSHGAWEAMAYVSFRPPQLLKLLAA
        + S++RKEKL ERI ALQQLVSPYGKTDTASVLLEAMEYI+FLHEQ+K+L APYL+ TPT ++Q           L H A+EA AYVS +   L +LLAA
Subjt:  LGSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSRLSHGAWEAMAYVSFRPPQLLKLLAA

Query:  MVQTSGLLSRPLPPALR
        MVQ SG  SRPL P LR
Subjt:  MVQTSGLLSRPLPPALR

XP_015868969.1 transcription factor bHLH153-like isoform X1 [Ziziphus jujuba]1.0e-2074.67Show/hide
Query:  LGSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSR
        + +++RKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQ+KVL APYL+ +PT+++Q+ E ++SL SR
Subjt:  LGSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSR

XP_015868985.1 transcription factor bHLH153-like isoform X3 [Ziziphus jujuba]1.0e-2074.67Show/hide
Query:  LGSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSR
        + +++RKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQ+KVL APYL+ +PT+++Q+ E ++SL SR
Subjt:  LGSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSR

XP_022155423.1 transcription factor bHLH153-like isoform X1 [Momordica charantia]4.9e-2386.3Show/hide
Query:  QFQLSLLGSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEE
        QF +S   ++DRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTP SRIQ+ E
Subjt:  QFQLSLLGSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEE

TrEMBL top hitse value%identityAlignment
A0A4S4E0S8 BHLH domain-containing protein1.0e-2664.1Show/hide
Query:  LGSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSRLSHGAWEAMAYVSFRPPQLLKLLAA
        + S++RKEKL ERI ALQQLVSPYGKTDTASVLLEAMEYI+FLHEQ+K+L APYL+ TPT ++Q           L H A+EA AYVS +   L +LLAA
Subjt:  LGSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSRLSHGAWEAMAYVSFRPPQLLKLLAA

Query:  MVQTSGLLSRPLPPALR
        MVQ SG  SRPL P LR
Subjt:  MVQTSGLLSRPLPPALR

A0A6J1DMX2 transcription factor bHLH153-like isoform X12.4e-2386.3Show/hide
Query:  QFQLSLLGSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEE
        QF +S   ++DRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTP SRIQ+ E
Subjt:  QFQLSLLGSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEE

A0A6P3Z227 transcription factor bHLH153-like isoform X14.9e-2174.67Show/hide
Query:  LGSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSR
        + +++RKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQ+KVL APYL+ +PT+++Q+ E ++SL SR
Subjt:  LGSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSR

A0A6P3Z240 transcription factor bHLH153-like isoform X34.9e-2174.67Show/hide
Query:  LGSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSR
        + +++RKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQ+KVL APYL+ +PT+++Q+ E ++SL SR
Subjt:  LGSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSR

M5XFT6 BHLH domain-containing protein1.1e-2074.67Show/hide
Query:  LGSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSR
        + +++RKEKLGERIVALQQLVSPYGKTDTASVLLEAM+YI+FLHEQ+KVL APYLE TPT+++Q+ E  +SL SR
Subjt:  LGSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSR

SwissProt top hitse value%identityAlignment
Q7XJU1 Transcription factor bHLH1549.9e-1968.49Show/hide
Query:  SEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSR
        S++RK+KL ERI ALQQLVSPYGKTDTASVLLE M+YIQFL EQ+KVL APYL+ TP S  ++E   +SL S+
Subjt:  SEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSR

Q7XJU2 Transcription factor bHLH1531.3e-1865.75Show/hide
Query:  SEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSR
        S++RK+K+GERI ALQQ+VSPYGKTDTASVLL+AM YI+FLHEQ+KVL APYL+  P +  Q+E   +SL +R
Subjt:  SEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSR

Q8GXT3 Transcription factor bHLH1234.8e-1358.06Show/hide
Query:  RKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEE
        RKEK+G+RI ALQQLVSP+GKTD ASVL EA+EYI+FLH+Q+  L  PY++   + + Q+ +
Subjt:  RKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEE

Q9LT67 Transcription factor bHLH1131.6e-1378Show/hide
Query:  RKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYL
        RKE+LGERI ALQQLVSPYGKTD ASVL EAM YI+FL +QI+VL +PYL
Subjt:  RKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYL

Q9M0X8 Transcription factor bHLH1148.1e-1354.55Show/hide
Query:  RPIFQFQLSLLGSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEE
        RP  +    L   + RKEKLG+RI ALQQLVSP+GKTDTASVL EA+EYI+FL EQ+ VL  P  E+     +Q+++
Subjt:  RPIFQFQLSLLGSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEE

Arabidopsis top hitse value%identityAlignment
AT1G05710.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein9.2e-2065.75Show/hide
Query:  SEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSR
        S++RK+K+GERI ALQQ+VSPYGKTDTASVLL+AM YI+FLHEQ+KVL APYL+  P +  Q+E   +SL +R
Subjt:  SEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSR

AT1G05710.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein9.2e-2065.75Show/hide
Query:  SEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSR
        S++RK+K+GERI ALQQ+VSPYGKTDTASVLL+AM YI+FLHEQ+KVL APYL+  P +  Q+E   +SL +R
Subjt:  SEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSR

AT1G05710.4 basic helix-loop-helix (bHLH) DNA-binding superfamily protein9.2e-2065.75Show/hide
Query:  SEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSR
        S++RK+K+GERI ALQQ+VSPYGKTDTASVLL+AM YI+FLHEQ+KVL APYL+  P +  Q+E   +SL +R
Subjt:  SEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSR

AT1G05710.5 basic helix-loop-helix (bHLH) DNA-binding superfamily protein9.2e-2065.75Show/hide
Query:  SEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSR
        S++RK+K+GERI ALQQ+VSPYGKTDTASVLL+AM YI+FLHEQ+KVL APYL+  P +  Q+E   +SL +R
Subjt:  SEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSR

AT2G31730.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein7.0e-2068.49Show/hide
Query:  SEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSR
        S++RK+KL ERI ALQQLVSPYGKTDTASVLLE M+YIQFL EQ+KVL APYL+ TP S  ++E   +SL S+
Subjt:  SEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCGAGCTCTAGGCTTCTGAATAATTTACAGATACCTGTTTTCGACGAATCATTTACATATTCATTAGCTTTGGCTTCTCTTCAAGGGGTAGGTGACAAAGATAA
GAAAAAAGAATGGAACAGAAAAGAAGCTCTTGCTCTGTTGATAAAAGCTATCTCATTTCTCTCACTACCAAAAGGCACAAGACCGATTTTTCAATTTCAGCTAAGTTTGT
TGGGATCAGAGGATAGGAAGGAGAAGCTGGGTGAAAGAATTGTAGCTCTGCAACAACTTGTTTCACCATATGGAAAGACAGATACTGCTTCTGTTCTTCTGGAGGCAATG
GAATACATACAATTTCTTCATGAACAGATTAAGGTGTTGATTGCTCCATACCTAGAAAGAACCCCAACGTCTAGAATACAGAAAGAAGAGGGAGTTTTTTCTTTATCGTC
GAGATTGAGCCATGGAGCCTGGGAAGCAATGGCTTATGTCTCGTTCCGACCGCCTCAACTACTCAAATTGCTAGCTGCAATGGTGCAGACATCTGGGCTCCTGTCAAGAC
CTCTTCCTCCAGCTCTGAGAAAAGTGTTTTGCAATTACAATGATGCTGTTGGGTCGCGTTTGAAGTCAGTAGATCTTCTGGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCGAGCTCTAGGCTTCTGAATAATTTACAGATACCTGTTTTCGACGAATCATTTACATATTCATTAGCTTTGGCTTCTCTTCAAGGGGTAGGTGACAAAGATAA
GAAAAAAGAATGGAACAGAAAAGAAGCTCTTGCTCTGTTGATAAAAGCTATCTCATTTCTCTCACTACCAAAAGGCACAAGACCGATTTTTCAATTTCAGCTAAGTTTGT
TGGGATCAGAGGATAGGAAGGAGAAGCTGGGTGAAAGAATTGTAGCTCTGCAACAACTTGTTTCACCATATGGAAAGACAGATACTGCTTCTGTTCTTCTGGAGGCAATG
GAATACATACAATTTCTTCATGAACAGATTAAGGTGTTGATTGCTCCATACCTAGAAAGAACCCCAACGTCTAGAATACAGAAAGAAGAGGGAGTTTTTTCTTTATCGTC
GAGATTGAGCCATGGAGCCTGGGAAGCAATGGCTTATGTCTCGTTCCGACCGCCTCAACTACTCAAATTGCTAGCTGCAATGGTGCAGACATCTGGGCTCCTGTCAAGAC
CTCTTCCTCCAGCTCTGAGAAAAGTGTTTTGCAATTACAATGATGCTGTTGGGTCGCGTTTGAAGTCAGTAGATCTTCTGGTTTAA
Protein sequenceShow/hide protein sequence
MKASSRLLNNLQIPVFDESFTYSLALASLQGVGDKDKKKEWNRKEALALLIKAISFLSLPKGTRPIFQFQLSLLGSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAM
EYIQFLHEQIKVLIAPYLERTPTSRIQKEEGVFSLSSRLSHGAWEAMAYVSFRPPQLLKLLAAMVQTSGLLSRPLPPALRKVFCNYNDAVGSRLKSVDLLV