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Spg014549 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg014549
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEmbryonic stem cell-specific 5-hydroxymethylcytosine-binding protein-like
Genome locationscaffold3:39169717..39180738
RNA-Seq ExpressionSpg014549
SyntenySpg014549
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0006974 - cellular response to DNA damage stimulus (biological process)
GO:0018142 - protein-DNA covalent cross-linking (biological process)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR003738 - SOS response associated peptidase (SRAP)
IPR036590 - SOS response associated peptidase-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458106.1 PREDICTED: embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein isoform X2 [Cucumis melo]3.8e-3891.67Show/hide
Query:  MCGRARCTLRADDIPRACHRTGGSVRTFNMDRFRPLYNASPGSDLPVVRRDDESSGGGVVLQCMKWGLIPSFTEKSEKPNYFKM
        MCGRARCTLRADDI RACHRTGG VR+ NMDRFRPL+NASPGSDLPVVRRDDESS GGVVLQCMKWGLIPSFTEK EKPNYFKM
Subjt:  MCGRARCTLRADDIPRACHRTGGSVRTFNMDRFRPLYNASPGSDLPVVRRDDESSGGGVVLQCMKWGLIPSFTEKSEKPNYFKM
XP_011659220.1 uncharacterized protein LOC101206083 isoform X1 [Cucumis sativus]3.8e-3891.67Show/hide
Query:  MCGRARCTLRADDIPRACHRTGGSVRTFNMDRFRPLYNASPGSDLPVVRRDDESSGGGVVLQCMKWGLIPSFTEKSEKPNYFKM
        MCGRARCTLRADDI RACHRTGG VR+ NMDRFRPL+NASPGSDLPVVRRDDESS GGVVLQCMKWGLIPSFTEK EKPNYFKM
Subjt:  MCGRARCTLRADDIPRACHRTGGSVRTFNMDRFRPLYNASPGSDLPVVRRDDESSGGGVVLQCMKWGLIPSFTEKSEKPNYFKM
XP_011659221.1 uncharacterized protein LOC101206083 isoform X2 [Cucumis sativus]3.8e-3891.67Show/hide
Query:  MCGRARCTLRADDIPRACHRTGGSVRTFNMDRFRPLYNASPGSDLPVVRRDDESSGGGVVLQCMKWGLIPSFTEKSEKPNYFKM
        MCGRARCTLRADDI RACHRTGG VR+ NMDRFRPL+NASPGSDLPVVRRDDESS GGVVLQCMKWGLIPSFTEK EKPNYFKM
Subjt:  MCGRARCTLRADDIPRACHRTGGSVRTFNMDRFRPLYNASPGSDLPVVRRDDESSGGGVVLQCMKWGLIPSFTEKSEKPNYFKM
XP_038896829.1 abasic site processing protein YoqW isoform X1 [Benincasa hispida]4.4e-3992.86Show/hide
Query:  MCGRARCTLRADDIPRACHRTGGSVRTFNMDRFRPLYNASPGSDLPVVRRDDESSGGGVVLQCMKWGLIPSFTEKSEKPNYFKM
        MCGRARCTLRADDIPRACHRTGG VRT NMDRFRPL+NASPGSDLPVVRRDDES  GGVVLQCMKWGLIPSFTEK EKPNYFKM
Subjt:  MCGRARCTLRADDIPRACHRTGGSVRTFNMDRFRPLYNASPGSDLPVVRRDDESSGGGVVLQCMKWGLIPSFTEKSEKPNYFKM
XP_038896830.1 abasic site processing protein HMCES isoform X2 [Benincasa hispida]4.4e-3992.86Show/hide
Query:  MCGRARCTLRADDIPRACHRTGGSVRTFNMDRFRPLYNASPGSDLPVVRRDDESSGGGVVLQCMKWGLIPSFTEKSEKPNYFKM
        MCGRARCTLRADDIPRACHRTGG VRT NMDRFRPL+NASPGSDLPVVRRDDES  GGVVLQCMKWGLIPSFTEK EKPNYFKM
Subjt:  MCGRARCTLRADDIPRACHRTGGSVRTFNMDRFRPLYNASPGSDLPVVRRDDESSGGGVVLQCMKWGLIPSFTEKSEKPNYFKM
TrEMBL top hitse value%identityAlignment
A0A0A0K6X8 Uncharacterized protein1.8e-3891.67Show/hide
Query:  MCGRARCTLRADDIPRACHRTGGSVRTFNMDRFRPLYNASPGSDLPVVRRDDESSGGGVVLQCMKWGLIPSFTEKSEKPNYFKM
        MCGRARCTLRADDI RACHRTGG VR+ NMDRFRPL+NASPGSDLPVVRRDDESS GGVVLQCMKWGLIPSFTEK EKPNYFKM
Subjt:  MCGRARCTLRADDIPRACHRTGGSVRTFNMDRFRPLYNASPGSDLPVVRRDDESSGGGVVLQCMKWGLIPSFTEKSEKPNYFKM
A0A1S3C6L7 putative SOS response-associated peptidase YobE isoform X11.8e-3891.67Show/hide
Query:  MCGRARCTLRADDIPRACHRTGGSVRTFNMDRFRPLYNASPGSDLPVVRRDDESSGGGVVLQCMKWGLIPSFTEKSEKPNYFKM
        MCGRARCTLRADDI RACHRTGG VR+ NMDRFRPL+NASPGSDLPVVRRDDESS GGVVLQCMKWGLIPSFTEK EKPNYFKM
Subjt:  MCGRARCTLRADDIPRACHRTGGSVRTFNMDRFRPLYNASPGSDLPVVRRDDESSGGGVVLQCMKWGLIPSFTEKSEKPNYFKM
A0A1S3C774 embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein isoform X21.8e-3891.67Show/hide
Query:  MCGRARCTLRADDIPRACHRTGGSVRTFNMDRFRPLYNASPGSDLPVVRRDDESSGGGVVLQCMKWGLIPSFTEKSEKPNYFKM
        MCGRARCTLRADDI RACHRTGG VR+ NMDRFRPL+NASPGSDLPVVRRDDESS GGVVLQCMKWGLIPSFTEK EKPNYFKM
Subjt:  MCGRARCTLRADDIPRACHRTGGSVRTFNMDRFRPLYNASPGSDLPVVRRDDESSGGGVVLQCMKWGLIPSFTEKSEKPNYFKM
A0A6J1H9B1 LOW QUALITY PROTEIN: uncharacterized protein LOC1114612584.1e-3889.29Show/hide
Query:  MCGRARCTLRADDIPRACHRTGGSVRTFNMDRFRPLYNASPGSDLPVVRRDDESSGGGVVLQCMKWGLIPSFTEKSEKPNYFKM
        MCGRARCTLR DDI RACHRTGG +R+ NMDRFRPL+NASPGSDLPVVRRDDES GGGVVLQCMKWGLIPSFT KSEKPNYFKM
Subjt:  MCGRARCTLRADDIPRACHRTGGSVRTFNMDRFRPLYNASPGSDLPVVRRDDESSGGGVVLQCMKWGLIPSFTEKSEKPNYFKM
A0A6J1KPK2 LOW QUALITY PROTEIN: uncharacterized protein LOC1114975574.1e-3889.29Show/hide
Query:  MCGRARCTLRADDIPRACHRTGGSVRTFNMDRFRPLYNASPGSDLPVVRRDDESSGGGVVLQCMKWGLIPSFTEKSEKPNYFKM
        MCGRARCTLR DDI RACHRTGG +R+ NMDRFRPL+NASPGSDLPVVRRDDES GGGVVLQCMKWGLIPSFT KSEKPNYFKM
Subjt:  MCGRARCTLRADDIPRACHRTGGSVRTFNMDRFRPLYNASPGSDLPVVRRDDESSGGGVVLQCMKWGLIPSFTEKSEKPNYFKM
SwissProt top hitse value%identityAlignment
Q6IND6 Abasic site processing protein HMCES3.6e-0738.82Show/hide
Query:  MCGRARCTLRADDIPRAC-------HRTGGSVRTFNMDRFRPLYNASPGSDLPVV------RRDDESSGGGVVLQCMKWGLIPSF
        MCGR  CTL  DD+ +AC        +     R  + D+++P YN SP S+ PV+      ++D +SS    VL  M+WGLIPS+
Subjt:  MCGRARCTLRADDIPRAC-------HRTGGSVRTFNMDRFRPLYNASPGSDLPVV------RRDDESSGGGVVLQCMKWGLIPSF
Q6P7N4 Abasic site processing protein HMCES5.5e-0841.18Show/hide
Query:  MCGRARCTLRADDIPRAC---HRTGG----SVRTFNMDRFRPLYNASPGSDLPVV------RRDDESSGGGVVLQCMKWGLIPSF
        MCGR  CTL  DD+ +AC    + GG    + R  + D+++P YN SP S+ PV+      ++D +SS    VL  M+WGLIPS+
Subjt:  MCGRARCTLRADDIPRAC---HRTGG----SVRTFNMDRFRPLYNASPGSDLPVV------RRDDESSGGGVVLQCMKWGLIPSF
Arabidopsis top hitse value%identityAlignment
AT2G26470.1 unknown protein1.4e-2761.18Show/hide
Query:  MCGRARCTLRADDIPRACHRTGGSVRTFNMDRFRPLYNASPGSDLPVVRRDDES-SGGGVVLQCMKWGLIPSFTEKSEKPNYFKM
        MCGR RCTLR DD+PRA HR     R  ++DR+RP YN +PGS +PV+RRD+E   G GVV+ CMKWGL+PSFT+K++KP++FKM
Subjt:  MCGRARCTLRADDIPRACHRTGGSVRTFNMDRFRPLYNASPGSDLPVVRRDDES-SGGGVVLQCMKWGLIPSFTEKSEKPNYFKM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCGGAAGAGCCCGCTGTACTCTTCGAGCCGATGACATCCCCAGGGCCTGCCACCGCACCGGCGGCTCCGTCCGCACCTTCAACATGGACCGTTTTCGCCCGCTGTA
CAATGCCTCACCGGGTTCGGATTTGCCGGTTGTTCGTCGGGACGATGAATCTTCTGGCGGAGGGGTCGTCCTCCAGTGCATGAAATGGGGGCTGATTCCTAGTTTTACTG
AGAAATCCGAGAAACCTAATTACTTCAAGATGGTGCTTTTTCCCCTTTTTTCCTTCTGGCCTTTGTCTGGCTTTCGTGCAGAAATGACAGTTACTATTTTTGTTGAAGCA
TTTGTAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCGGAAGAGCCCGCTGTACTCTTCGAGCCGATGACATCCCCAGGGCCTGCCACCGCACCGGCGGCTCCGTCCGCACCTTCAACATGGACCGTTTTCGCCCGCTGTA
CAATGCCTCACCGGGTTCGGATTTGCCGGTTGTTCGTCGGGACGATGAATCTTCTGGCGGAGGGGTCGTCCTCCAGTGCATGAAATGGGGGCTGATTCCTAGTTTTACTG
AGAAATCCGAGAAACCTAATTACTTCAAGATGGTGCTTTTTCCCCTTTTTTCCTTCTGGCCTTTGTCTGGCTTTCGTGCAGAAATGACAGTTACTATTTTTGTTGAAGCA
TTTGTAGGATGA
Protein sequenceShow/hide protein sequence
MCGRARCTLRADDIPRACHRTGGSVRTFNMDRFRPLYNASPGSDLPVVRRDDESSGGGVVLQCMKWGLIPSFTEKSEKPNYFKMVLFPLFSFWPLSGFRAEMTVTIFVEA
FVG