CuGenDBv2

Gene ID	Spg014554
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	R3H-assoc domain-containing protein
Genome location	scaffold3:43488513..43492872
RNA-Seq Expression	Spg014554
Synteny	Spg014554
Gene Ontology terms	GO:0009058 - biosynthetic process (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003824 - catalytic activity (molecular function)
InterPro domains	IPR025952 - R3H-associated N-terminal domain IPR036867 - R3H domain superfamily IPR039629 - R3H domain-containing protein 4

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022150187.1 uncharacterized protein LOC111018421 isoform X1 [Momordica charantia]

4.7e-126

91.53

Show/hide

Query:  MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDW
        MASTDVLKR +NR TFSPL DP+K DADSRGMSIEKKIEFLESL GKVTNRKSRRWLNDRLLMELVPRLNAEE+RGLFAPPPWGDDVRPTTFSMTNA DW
Subjt:  MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDW

Query:  DKFRSIDMDKEAKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFY
        DKFRSIDMDKEAK IGVLENSS KRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFE CIRSFISD S ++VLTLRVQDPFHRLLLHGVCEFY
Subjt:  DKFRSIDMDKEAKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFY

Query:  NLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW
        NLDSVTVPESK GGSTK+TRI+RKKKAMVEIP+ITL+HFLKMSKEGTW
Subjt:  NLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW

XP_022960434.1 R3H domain-containing protein 4-like [Cucurbita moschata]

4.3e-127

91.53

Show/hide

Query:  MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDW
        MASTDVL +EQNRFTFSPLSDP+K D +SRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNA DW
Subjt:  MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDW

Query:  DKFRSIDMDKEAKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFY
        DKFRSIDMDKEAK IGVLENSS +R+GHIDADKMAFLNAWRRIE RTREALRRSFLP LVE FEECIRSFISD SN++VLTLRVQDPFHRLLLHGVCEFY
Subjt:  DKFRSIDMDKEAKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFY

Query:  NLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW
        NLDS TVPESK  G TKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW
Subjt:  NLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW

XP_023004636.1 R3H domain-containing protein 4-like [Cucurbita maxima]

1.6e-126

91.13

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Query:  MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDW
        MASTDVL +EQNRFTFSPLSDP+K D +SRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNA DW
Subjt:  MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDW

Query:  DKFRSIDMDKEAKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFY
        DKFRSIDMDKEAK IGVL+NSS +RKGHI+ADKMAFLNAWRRIE RTREALRRSFLP LVE FEECIRSFISD SN++VLTLRVQDPFHRLLLHGVCEFY
Subjt:  DKFRSIDMDKEAKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFY

Query:  NLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW
        NLDS TVPESK  G TKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW
Subjt:  NLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW

XP_023515083.1 R3H domain-containing protein 4-like [Cucurbita pepo subsp. pepo]

1.1e-127

91.94

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Query:  MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDW
        MASTDVL +EQNRFTFSPLSDP+K D +SRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNA DW
Subjt:  MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDW

Query:  DKFRSIDMDKEAKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFY
        DKFRSIDMDKEAK IGVLENSS ++KGHIDADKMAFLNAWRRIE RTREALRRSFLP LVE FEECIRSFISD SN++VLTLRVQDPFHRLLLHGVCEFY
Subjt:  DKFRSIDMDKEAKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFY

Query:  NLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW
        NLDS TVPESK  GSTKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW
Subjt:  NLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW

XP_038896192.1 R3H domain-containing protein 4 [Benincasa hispida]

3.3e-127

91.53

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Query:  MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDW
        MASTDVLKRE NRFTFSPL+DPL  D DSR MSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDW
Subjt:  MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDW

Query:  DKFRSIDMDKEAKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFY
        DKFRSIDMDKEAK IGV ENSS KRKGHIDADKMAFLNAW RIECRTREALRRSFLPEL+EGFEECIRSFIS+ + ++VL LRVQDPFHRLLLHGVCEFY
Subjt:  DKFRSIDMDKEAKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFY

Query:  NLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW
        NLDSVTVPESK+GGS KMTRITRKKKAMVE+PNITLTHFLKMSKEGTW
Subjt:  NLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K5V5 R3H-assoc domain-containing protein

6.2e-124

89.52

Show/hide

Query:  MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDW
        MAS DVL+RE NRF FSPL+DPL  D DSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNA DW
Subjt:  MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDW

Query:  DKFRSIDMDKEAKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFY
        DKFRSIDMDKEAK IGV ENSS KRKGHIDADKMAFLNAWRRIECRTREALRRSF  ELVEG+EECIRSFISD   E+VL +RVQDPFHRLLLHGVCEFY
Subjt:  DKFRSIDMDKEAKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFY

Query:  NLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW
        NLDSVTV ESK+ GS KMTRITRKKKAMVE+PNITLTHFLKMSKEGTW
Subjt:  NLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW

A0A6J1DA21 uncharacterized protein LOC111018421 isoform X1

2.3e-126

91.53

Show/hide

Query:  MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDW
        MASTDVLKR +NR TFSPL DP+K DADSRGMSIEKKIEFLESL GKVTNRKSRRWLNDRLLMELVPRLNAEE+RGLFAPPPWGDDVRPTTFSMTNA DW
Subjt:  MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDW

Query:  DKFRSIDMDKEAKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFY
        DKFRSIDMDKEAK IGVLENSS KRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFE CIRSFISD S ++VLTLRVQDPFHRLLLHGVCEFY
Subjt:  DKFRSIDMDKEAKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFY

Query:  NLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW
        NLDSVTVPESK GGSTK+TRI+RKKKAMVEIP+ITL+HFLKMSKEGTW
Subjt:  NLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW

A0A6J1GN38 uncharacterized protein LOC111456018 isoform X2

1.8e-123

88.71

Show/hide

Query:  MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDW
        MASTDVLKR++NRFTF  LSDPLK D DSR MSIEKKIEFLESLTGKVTNRK+RRWLNDRLLMELVPRLNAEEIRGLFAPPPWGD+VRPTTFS TNAGDW
Subjt:  MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDW

Query:  DKFRSIDMDKEAKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFY
        DKFRSIDMDKEAKFIGVLENSS KRKGHIDADK+AFLNAWRRIEC+TREALRRSFLPELVE FE  IRSF+ D S E+VLTLRV+DPF RLLLHGVCEFY
Subjt:  DKFRSIDMDKEAKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFY

Query:  NLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW
        NLDSVTVPE K+G STKMTR+TRKKKA+VEIPNITLTHFLKMSKEGTW
Subjt:  NLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW

A0A6J1HB10 R3H domain-containing protein 4-like

2.1e-127

91.53

Show/hide

Query:  MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDW
        MASTDVL +EQNRFTFSPLSDP+K D +SRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNA DW
Subjt:  MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDW

Query:  DKFRSIDMDKEAKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFY
        DKFRSIDMDKEAK IGVLENSS +R+GHIDADKMAFLNAWRRIE RTREALRRSFLP LVE FEECIRSFISD SN++VLTLRVQDPFHRLLLHGVCEFY
Subjt:  DKFRSIDMDKEAKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFY

Query:  NLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW
        NLDS TVPESK  G TKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW
Subjt:  NLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW

A0A6J1KSN3 R3H domain-containing protein 4-like

7.9e-127

91.13

Show/hide

Query:  MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDW
        MASTDVL +EQNRFTFSPLSDP+K D +SRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNA DW
Subjt:  MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDW

Query:  DKFRSIDMDKEAKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFY
        DKFRSIDMDKEAK IGVL+NSS +RKGHI+ADKMAFLNAWRRIE RTREALRRSFLP LVE FEECIRSFISD SN++VLTLRVQDPFHRLLLHGVCEFY
Subjt:  DKFRSIDMDKEAKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFY

Query:  NLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW
        NLDS TVPESK  G TKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW
Subjt:  NLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW

SwissProt top hits

e value

%identity

Alignment

Q2KIL7 R3H domain-containing protein 4

7.3e-05

27.68

Show/hide

Query:  LTGKVTNRKS-RRWLNDRLLMELVPRLNAE--EIRGLFAPPPWGDDVRPTTFSMTNAGDWDKFRSIDMDKEAKFIGVLEN---SSPKRKGHIDADKM---
        L  K   RKS +R  N + L+ L+    A      G  APP           + T    W+ F +   +++ + +  LE+   S  +R+G    +     
Subjt:  LTGKVTNRKS-RRWLNDRLLMELVPRLNAE--EIRGLFAPPPWGDDVRPTTFSMTNAGDWDKFRSIDMDKEAKFIGVLEN---SSPKRKGHIDADKM---

Query:  --AFL--NAWRRIECRTREALRRSFLP-ELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFYNLDSVT
          A+     ++RI  R R  L+RS +P E +E +EE +  F S  S + V T  + + F RLLLH +C++ +L S +
Subjt:  --AFL--NAWRRIECRTREALRRSFLP-ELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFYNLDSVT

Q4VBF2 R3H domain-containing protein 4

5.6e-05

29.91

Show/hide

Query:  WDKFRSIDMDKEAKFIGVLENSS-------PKRKGHIDADKMAFL--NAWRRIECRTREALRRSFLP-ELVEGFEECIRSFISDPSNENVLTLRVQDPFH
        W+ F +   +++ + +  LE+ S       P R      +   F     +RRI  R R  L+RS +P E +E +EE + +F S  S + V T  + + + 
Subjt:  WDKFRSIDMDKEAKFIGVLENSS-------PKRKGHIDADKMAFL--NAWRRIECRTREALRRSFLP-ELVEGFEECIRSFISDPSNENVLTLRVQDPFH

Query:  RLLLHGVCEFYNLDSVT
        RLLLH VC++ +L S +
Subjt:  RLLLHGVCEFYNLDSVT

Arabidopsis top hits

e value

%identity

Alignment

AT1G03250.1 unknown protein

8.7e-86

Show/hide

Query:  MASTDVLKREQNRFTFSPLSDPLKDDAD-SRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGD
        MA+T+V++R++     S L DP + D   SRG+S+EKKIE LESL G+V+NR+SRRWLNDR+LMELVPRL+A+EIRGLFAPPPWGDDV P+ FS+TN G+
Subjt:  MASTDVLKREQNRFTFSPLSDPLKDDAD-SRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGD

Query:  WDKFRSIDMDKEAKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEF
        WDKFR+IDMDKEA  +  L  SS ++KG +D DK+A LNAWRRI+CRTR+ALRRSFLPEL+EG+E CI  FI +    +VL L+VQDPFHRLLLHGVCE+
Subjt:  WDKFRSIDMDKEAKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEF

Query:  YNLDSVTVPESKSGGSTKMTRITRKKKA-MVEIPNITLTHFLKMSKEGTW
        +NL S T  E     + K T I  KK     E P+I+L HFL+MSKEG W
Subjt:  YNLDSVTVPESKSGGSTKMTRITRKKKA-MVEIPNITLTHFLKMSKEGTW

AT1G03250.2 unknown protein

8.1e-84

60.55

Show/hide

Query:  MASTDVLKREQNRFTFSPLSDPLKDDAD-SRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGD
        MA+T+V++R++     S L DP + D   SRG+S+EKKIE LESL G+V+NR+SRRWLNDR+LMELVPRL+A+EIRGLFAPPPWGDDV P+ FS+TN G+
Subjt:  MASTDVLKREQNRFTFSPLSDPLKDDAD-SRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGD

Query:  WDKFRSIDMDKE------AKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLL
        WDKFR+IDMDKE      A  +  L  SS ++KG +D DK+A LNAWRRI+CRTR+ALRRSFLPEL+EG+E CI  FI +    +VL L+VQDPFHRLLL
Subjt:  WDKFRSIDMDKE------AKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLL

Query:  HGVCEFYNLDSVTVPESKSGGSTKMTRITRKKKA-MVEIPNITLTHFLKMSKEGTW
        HGVCE++NL S T  E     + K T I  KK     E P+I+L HFL+MSKEG W
Subjt:  HGVCEFYNLDSVTVPESKSGGSTKMTRITRKKKA-MVEIPNITLTHFLKMSKEGTW

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCATCCACCGATGTGCTTAAGCGAGAACAGAATCGTTTCACCTTTTCCCCTCTCAGCGATCCACTTAAAGATGATGCGGATTCTCGGGGGATGTCTATCGAGAAGAA
GATTGAATTCTTGGAGAGCTTGACTGGGAAGGTTACTAACAGGAAGTCTCGCAGATGGTTAAATGATCGTCTTCTGATGGAGCTTGTTCCTCGTTTGAATGCTGAAGAAA
TCAGAGGCTTGTTTGCTCCACCACCTTGGGGTGATGATGTACGGCCCACAACATTCTCCATGACTAATGCAGGAGACTGGGACAAGTTCAGGAGTATCGACATGGATAAA
GAGGCTAAGTTCATTGGAGTCTTGGAGAACTCATCCCCTAAGAGAAAGGGTCATATAGATGCTGACAAAATGGCTTTCTTGAATGCCTGGCGCAGAATTGAGTGTCGAAC
AAGAGAGGCACTTCGCCGTAGTTTTCTTCCAGAGCTCGTTGAGGGTTTTGAGGAGTGCATAAGATCATTCATTTCAGACCCTAGTAATGAAAATGTCCTAACTTTGCGGG
TTCAAGATCCATTCCACAGATTATTGCTGCATGGAGTTTGTGAGTTCTACAACTTGGACTCCGTGACTGTTCCCGAGTCGAAGAGTGGTGGCTCTACGAAGATGACTCGA
ATAACAAGGAAGAAGAAGGCCATGGTTGAGATCCCAAATATAACTCTGACCCATTTTCTGAAAATGTCCAAAGAAGGAACATGGTAA

mRNA sequence

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Protein sequence

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MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDWDKFRSIDMDK
EAKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFYNLDSVTVPESKSGGSTKMTR
ITRKKKAMVEIPNITLTHFLKMSKEGTW

Spg014554 (gene) of Sponge gourd (cylindrica) v1 genome