; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg014616 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg014616
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLITAF domain-containing protein
Genome locationscaffold3:41610010..41613264
RNA-Seq ExpressionSpg014616
SyntenySpg014616
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006629 - LPS-induced tumour necrosis factor alpha factor
IPR037519 - LITAF domain containing protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039847.1 zf-LITAF-like domain-containing protein [Cucumis melo var. makuwa]4.4e-7091.73Show/hide
Query:  MSKNDEPVVGVPFYVENNVYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTDIRSKISSAAFIGCMVPFMLGVCFLCPSMDCLWHKYHY
        MSKN EPVVGVP YV NN YQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPF CVYCGNSGLT IRSKIS AA +GCM+PFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNDEPVVGVPFYVENNVYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTDIRSKISSAAFIGCMVPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSFALP
        CPSCKEKVGDFEKLDRCAVMDPPHWTQPS+ALP
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSFALP

XP_004140553.1 GSH-induced LITAF domain protein [Cucumis sativus]3.4e-7091.73Show/hide
Query:  MSKNDEPVVGVPFYVENNVYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTDIRSKISSAAFIGCMVPFMLGVCFLCPSMDCLWHKYHY
        MSKN EPVVGVP YV NN YQAGQIPPNAIFGDP GVPIQQTMYRDTPAPF CVYCGNSGLT IRSKISSAA +GCM+PFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNDEPVVGVPFYVENNVYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTDIRSKISSAAFIGCMVPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSFALP
        CPSCKEKVGDFEKLDRCAVMDPPHWTQPS+ALP
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSFALP

XP_008459901.1 PREDICTED: uncharacterized protein LOC103498881 [Cucumis melo]1.7e-6990.98Show/hide
Query:  MSKNDEPVVGVPFYVENNVYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTDIRSKISSAAFIGCMVPFMLGVCFLCPSMDCLWHKYHY
        MSKN EPVVGVP YV NN YQAGQIPPN IFGDPQGVPIQQTMYRDTPAPF CVYCGNSGLT IRSKIS AA +GCM+PFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNDEPVVGVPFYVENNVYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTDIRSKISSAAFIGCMVPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSFALP
        CPSCKEKVGDFEKLDRCAVMDPPHWTQPS+ALP
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSFALP

XP_022991744.1 GSH-induced LITAF domain protein [Cucurbita maxima]2.9e-6989.55Show/hide
Query:  MSKNDEPVVGVPFYVENNVYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTDIRSKISSAAFIGCMVPFMLGVCFLCPSMDCLWHKYHY
        MSKNDEPVVG+PFYV NN YQAGQIPPNAIFG PQGVPI QTMYRDTPAP+ CVYCGNSGLT IRSKIS AA +GCM+PFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNDEPVVGVPFYVENNVYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTDIRSKISSAAFIGCMVPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSFALPA
        CPSCKEKVGDFEK D CAVMDPPHWTQPSFALPA
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSFALPA

XP_038906445.1 GSH-induced LITAF domain protein [Benincasa hispida]1.7e-6989.55Show/hide
Query:  MSKNDEPVVGVPFYVENNVYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTDIRSKISSAAFIGCMVPFMLGVCFLCPSMDCLWHKYHY
        MSKNDEPVVG+P Y  NN YQAGQIP NAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTD+RSKISSAA +GCM PF+LGVCFL PSMDCLWHKYHY
Subjt:  MSKNDEPVVGVPFYVENNVYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTDIRSKISSAAFIGCMVPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSFALPA
        CPSCKEKVGDFEK+DRCAVMDPP+WTQPSFALPA
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSFALPA

TrEMBL top hitse value%identityAlignment
A0A0A0KDG7 LITAF domain-containing protein1.6e-7091.73Show/hide
Query:  MSKNDEPVVGVPFYVENNVYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTDIRSKISSAAFIGCMVPFMLGVCFLCPSMDCLWHKYHY
        MSKN EPVVGVP YV NN YQAGQIPPNAIFGDP GVPIQQTMYRDTPAPF CVYCGNSGLT IRSKISSAA +GCM+PFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNDEPVVGVPFYVENNVYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTDIRSKISSAAFIGCMVPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSFALP
        CPSCKEKVGDFEKLDRCAVMDPPHWTQPS+ALP
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSFALP

A0A1S3CCH3 uncharacterized protein LOC1034988818.1e-7090.98Show/hide
Query:  MSKNDEPVVGVPFYVENNVYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTDIRSKISSAAFIGCMVPFMLGVCFLCPSMDCLWHKYHY
        MSKN EPVVGVP YV NN YQAGQIPPN IFGDPQGVPIQQTMYRDTPAPF CVYCGNSGLT IRSKIS AA +GCM+PFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNDEPVVGVPFYVENNVYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTDIRSKISSAAFIGCMVPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSFALP
        CPSCKEKVGDFEKLDRCAVMDPPHWTQPS+ALP
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSFALP

A0A5D3DMB0 Zf-LITAF-like domain-containing protein2.1e-7091.73Show/hide
Query:  MSKNDEPVVGVPFYVENNVYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTDIRSKISSAAFIGCMVPFMLGVCFLCPSMDCLWHKYHY
        MSKN EPVVGVP YV NN YQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPF CVYCGNSGLT IRSKIS AA +GCM+PFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNDEPVVGVPFYVENNVYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTDIRSKISSAAFIGCMVPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSFALP
        CPSCKEKVGDFEKLDRCAVMDPPHWTQPS+ALP
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSFALP

A0A6J1GS01 GSH-induced LITAF domain protein1.4e-6989.55Show/hide
Query:  MSKNDEPVVGVPFYVENNVYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTDIRSKISSAAFIGCMVPFMLGVCFLCPSMDCLWHKYHY
        MSKNDEPVVG+PFYV NN YQAGQIPPNAIFG PQGVPI QTMYRDTPAP+ CVYCGNSGLT IRSKIS AA +GCM+PFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNDEPVVGVPFYVENNVYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTDIRSKISSAAFIGCMVPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSFALPA
        CPSCKEKVGDFEK D CAVMDPPHWTQPSFALPA
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSFALPA

A0A6J1JVN9 GSH-induced LITAF domain protein1.4e-6989.55Show/hide
Query:  MSKNDEPVVGVPFYVENNVYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTDIRSKISSAAFIGCMVPFMLGVCFLCPSMDCLWHKYHY
        MSKNDEPVVG+PFYV NN YQAGQIPPNAIFG PQGVPI QTMYRDTPAP+ CVYCGNSGLT IRSKIS AA +GCM+PFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNDEPVVGVPFYVENNVYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTDIRSKISSAAFIGCMVPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSFALPA
        CPSCKEKVGDFEK D CAVMDPPHWTQPSFALPA
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSFALPA

SwissProt top hitse value%identityAlignment
P0C0T0 Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog5.7e-0427.72Show/hide
Query:  YQAGQIP-PNAIFGDPQGVPIQQTM-YRDTPAPFYCVYCGNSGLTDIRSKISSAAFIG----CMVPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEK
        Y    +P PNA     Q V +QQ + + D P    C  C    +T +     +  ++     C++  + G CF+   +D L    HYCP+CK  +G +++
Subjt:  YQAGQIP-PNAIFGDPQGVPIQQTM-YRDTPAPFYCVYCGNSGLTDIRSKISSAAFIG----CMVPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEK

Query:  L
        L
Subjt:  L

Q94CD4 GSH-induced LITAF domain protein3.2e-5568.66Show/hide
Query:  MSKNDEPVVGVPFYVENNVYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTDIRSKISSAAFIGCMVPFMLGVCFLCPSMDCLWHKYHY
        M+K    V+GVP+Y   N YQAG +PPNAI+GDP G PIQQT+YRDTPAPF C+YCGN+GLT++RSK   AA + CM+PFMLG CFLCPSMDCLW+K H+
Subjt:  MSKNDEPVVGVPFYVENNVYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTDIRSKISSAAFIGCMVPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSFALPA
        CP C  KV DFEK D C VMDPP W QPSFALPA
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSFALPA

Q9JLJ0 Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog4.4e-0427.72Show/hide
Query:  YQAGQIP-PNAIFGDPQGVPIQQTM-YRDTPAPFYCVYCGNSGLTDIRSKISSAAFIG----CMVPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEK
        Y    +P PNA     Q V +QQ + + D P    C  C    +T +     +  ++     C++  + G CF+   +D L    HYCP+CK  +G +++
Subjt:  YQAGQIP-PNAIFGDPQGVPIQQTM-YRDTPAPFYCVYCGNSGLTDIRSKISSAAFIG----CMVPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEK

Query:  L
        L
Subjt:  L

Arabidopsis top hitse value%identityAlignment
AT5G13190.1 CONTAINS InterPro DOMAIN/s: LPS-induced tumor necrosis factor alpha factor (InterPro:IPR006629); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).2.3e-5668.66Show/hide
Query:  MSKNDEPVVGVPFYVENNVYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTDIRSKISSAAFIGCMVPFMLGVCFLCPSMDCLWHKYHY
        M+K    V+GVP+Y   N YQAG +PPNAI+GDP G PIQQT+YRDTPAPF C+YCGN+GLT++RSK   AA + CM+PFMLG CFLCPSMDCLW+K H+
Subjt:  MSKNDEPVVGVPFYVENNVYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTDIRSKISSAAFIGCMVPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSFALPA
        CP C  KV DFEK D C VMDPP W QPSFALPA
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSFALPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAGAACGACGAGCCGGTCGTCGGAGTTCCATTCTATGTGGAGAACAACGTGTATCAGGCCGGACAGATCCCACCGAACGCCATTTTTGGCGATCCTCAGGGCGT
TCCTATCCAGCAAACCATGTACCGCGACACTCCTGCTCCTTTCTACTGTGTTTATTGTGGAAATTCCGGTCTCACCGACATCAGATCAAAGATAAGTTCAGCTGCTTTCA
TTGGTTGTATGGTGCCTTTTATGTTGGGAGTATGCTTTCTTTGTCCTTCAATGGACTGCCTTTGGCATAAGTACCACTATTGCCCCAGCTGCAAGGAAAAGGTTGGTGAT
TTTGAGAAATTGGATAGGTGTGCTGTGATGGATCCTCCACACTGGACCCAGCCAAGCTTTGCATTGCCTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAAGAACGACGAGCCGGTCGTCGGAGTTCCATTCTATGTGGAGAACAACGTGTATCAGGCCGGACAGATCCCACCGAACGCCATTTTTGGCGATCCTCAGGGCGT
TCCTATCCAGCAAACCATGTACCGCGACACTCCTGCTCCTTTCTACTGTGTTTATTGTGGAAATTCCGGTCTCACCGACATCAGATCAAAGATAAGTTCAGCTGCTTTCA
TTGGTTGTATGGTGCCTTTTATGTTGGGAGTATGCTTTCTTTGTCCTTCAATGGACTGCCTTTGGCATAAGTACCACTATTGCCCCAGCTGCAAGGAAAAGGTTGGTGAT
TTTGAGAAATTGGATAGGTGTGCTGTGATGGATCCTCCACACTGGACCCAGCCAAGCTTTGCATTGCCTGCTTGA
Protein sequenceShow/hide protein sequence
MSKNDEPVVGVPFYVENNVYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSGLTDIRSKISSAAFIGCMVPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGD
FEKLDRCAVMDPPHWTQPSFALPA