CuGenDBv2

Gene ID	Spg014655
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	WD repeat-containing protein 43
Genome location	scaffold3:47581563..47585085
RNA-Seq Expression	Spg014655
Synteny	Spg014655
Gene Ontology terms	GO:0006364 - rRNA processing (biological process) GO:0005730 - nucleolus (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR007148 - Small-subunit processome, Utp12 IPR011047 - Quinoprotein alcohol dehydrogenase-like superfamily IPR015943 - WD40/YVTN repeat-like-containing domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6593430.1 WD repeat-containing protein 43, partial [Cucurbita argyrosperma subsp. sororia]

4.6e-279

84.1

Show/hide

Query:  MKKEILKSPPITAFTPDGDFLAILSSNGT--IWSTSDGSLLAEWKDTEGKTDVGYSCMACYFVGKKGKNSSCVIAMGTNNGDVLAVNASSGETKWVSAGC
        MK E  KSPPITAFTP+GD+LAILSSNGT  IW+TSDGSLLAEWKD +GKTD GYSC+AC FVGKK KNSSC+IA+GTN GDVL VNASSGETKWVSAGC
Subjt:  MKKEILKSPPITAFTPDGDFLAILSSNGT--IWSTSDGSLLAEWKDTEGKTDVGYSCMACYFVGKKGKNSSCVIAMGTNNGDVLAVNASSGETKWVSAGC

Query:  HLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSISDDAKAII
        HLGGVIGLSFA+KGRR+HTVGSNG+AF+M+ ETGSII EFKASKKSISSSAFSLDEKY+AVAGKKLKILSTDNG ELM HPDKLGPVKL SISDDAK II
Subjt:  HLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSISDDAKAII

Query:  TSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNRIS
        TSE GAKH+QVWWCDMSAGKLSRGPVLSMKHPPFVSECRNI N E++IVVLSVSVSGVAYLWKLKFLSED+ +PTKVTVK N+++SAEENHGSAKKNRIS
Subjt:  TSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNRIS

Query:  VIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQNDDSSEQGPHVIEQAVTTPKSKKSKKKRAAFDLDSLTAGDVSDVGNGN
        V++S IQGL DNEVSVLVTHGSMDLPQH+V NIGY AKED +   EK           +GPH I+QAVT+PKSKKSKKKRAA DLDS  AGDVSDVGN +
Subjt:  VIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQNDDSSEQGPHVIEQAVTTPKSKKSKKKRAAFDLDSLTAGDVSDVGNGN

Query:  ASDVLFNDDLNEPTMGEKLASLNLEDQNEEEGREQ-EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISI
         S+VLFNDDLNEPTMG+KLASLNLE+QNE+E  EQ EPSVPAIPPSADSVQVLLKQAL ADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH+LISI
Subjt:  ASDVLFNDDLNEPTMGEKLASLNLEDQNEEEGREQ-EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISI

Query:  IQSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQSAPLLSSSLDFLYTGVLDEEVGENDAIVPIIYEEDDSDDKE-SGDEMET
        IQSRGAILVCA+PWLRGLL QHASRIMSQESSLLALNSLYQLIESRISTFQSA LLSSSLDFLYTGVLDEE  ENDAIVPIIYEEDDSDDKE SGDEMET
Subjt:  IQSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQSAPLLSSSLDFLYTGVLDEEVGENDAIVPIIYEEDDSDDKE-SGDEMET

Query:  DEDDEENEDVEV-AFEDLSAGEVDDDMNE
           DEE   VEV AF+DLSAGEVDDDM+E
Subjt:  DEDDEENEDVEV-AFEDLSAGEVDDDMNE

XP_008461080.1 PREDICTED: WD repeat-containing protein 43 [Cucumis melo]

9.6e-285

84.05

Show/hide

Query:  MKKEILKSPPITAFTPDGDFLAILSSNGT--IWSTSDGSLLAEWKDTEGKTDVGYSCMACYFVGKKGKNSSCVIAMGTNNGDVLAVNASSGETKWVSAGC
        MKKEILKSPPITAFTPDGD+LAI SSNGT  IWST DGSLLAEWKD +GK D GYSCMAC  +GKK K+S C++A+GTNNGDVLAVNAS+GE KWVS GC
Subjt:  MKKEILKSPPITAFTPDGDFLAILSSNGT--IWSTSDGSLLAEWKDTEGKTDVGYSCMACYFVGKKGKNSSCVIAMGTNNGDVLAVNASSGETKWVSAGC

Query:  HLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSISDDAKAII
        H GGVIGLSFAN+GRR+HTVGSNGMA EMDTETG+IIKEFKASKKSISSSAFSLDEKY+AVAGKKLKILS D+GDEL+ HPDKL PVKLVSISDDAK I+
Subjt:  HLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSISDDAKAII

Query:  TSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNRIS
        TSELGAKHLQVWWCDMSAGK SRGPVLSM HPPFVSECRN+ N+E+++VVLSVSVSG AYLWKLK LSEDE  PTKV+VK ND QSAEENHGSAKKNR+S
Subjt:  TSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNRIS

Query:  VIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQNDDSSEQGPHVIEQAVTTPKSKKSKKKRAAFDLDSLTAGDVSDVGNGN
        V+AS+I  + DNEVSVLVTHGS+DLPQHS+ +IGY+ KED +TAHE KTLQQND  SEQGPH IEQ V TPKSKKSKKKRAA DLDS TAGDVSDVGNG+
Subjt:  VIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQNDDSSEQGPHVIEQAVTTPKSKKSKKKRAAFDLDSLTAGDVSDVGNGN

Query:  ASDVLFNDDLNEPTMGEKLASLNLEDQNEEEGREQE-PSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISI
        ASDV+FNDDLNEP+MGEKLASLNL DQNE+ GREQE PSVP IPPSADSVQVLLKQALHADD ALLLECLYTKDDKVISKSIAQLNSSDVLKLLHS+IS 
Subjt:  ASDVLFNDDLNEPTMGEKLASLNLEDQNEEEGREQE-PSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISI

Query:  IQSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQSAPLLSSSLDFLYTGVLDEEVGENDAIVPIIYEEDDSDDKESGDEMETD
        IQSRGAILVCALPWLRGLL QHAS+IMSQESSLLALNSLYQLIE+RISTFQSA LLSSSLDFLYTGVLDEE  +NDAIVPIIYEE+DSD+ E+GDEMETD
Subjt:  IQSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQSAPLLSSSLDFLYTGVLDEEVGENDAIVPIIYEEDDSDDKESGDEMETD

Query:  EDDEENEDVEVAFEDLSAGEVDDDMNE
        EDDE +E VE AF+DLSAGEVDDDM+E
Subjt:  EDDEENEDVEVAFEDLSAGEVDDDMNE

XP_022150139.1 WD repeat-containing protein 43 [Momordica charantia]

1.8e-291

87.86

Show/hide

Query:  MKKEILKSPPITAFTPDGDFLAILSSNGT--IWSTSDGSLLAEWKDTEGKTDVGYSCMACYFVGKK--GKNSSCVIAMGTNNGDVLAVNASSGETKWVSA
        MKKE+LKSPPITAFTPDGD+LAILS N T  IWS  DGSLLAEWKD+EGKTDVGYSC+AC FV KK   K SSCVIA+GT+NGDVLAVNASSGETKWVSA
Subjt:  MKKEILKSPPITAFTPDGDFLAILSSNGT--IWSTSDGSLLAEWKDTEGKTDVGYSCMACYFVGKK--GKNSSCVIAMGTNNGDVLAVNASSGETKWVSA

Query:  GCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSISDDAKA
        GCH+GGVIGLSFANKGRR+ TVGSNGMA EMDTETG+IIKEFKASKKSISSSAFS DEKY+AVAGKKL+ILSTDNGDELM H DKLGPVKLVSISDDAKA
Subjt:  GCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSISDDAKA

Query:  IITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNR
        IITSE GAKHLQVWWCDMSA KLSRGPVLSMKHPPFVSEC+NI NEE++IVVLSVSVSGVAY+W+LK LSEDE SP KVTVK ND QSAEENHGSAKKNR
Subjt:  IITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNR

Query:  ISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQNDDSSEQGPHVIEQAVTTPKSKKSKKKRAAFDLDSLTAGDVSDVGN
        ISVIASRI G  DNEVSVLVTHGSMD PQ S+FNIGYS KED +TAHEKKTLQQNDD S QGPH IEQAVTTPKSKKSKKKRAA D+DSLTAGDVS VGN
Subjt:  ISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQNDDSSEQGPHVIEQAVTTPKSKKSKKKRAAFDLDSLTAGDVSDVGN

Query:  GNASDVLFNDDLNEPTMGEKLASLNLEDQNEEEGREQ-EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLI
        G+ASDVLFNDD+NEPTMGEKLASLNL DQ+E+E  EQ EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLI
Subjt:  GNASDVLFNDDLNEPTMGEKLASLNLEDQNEEEGREQ-EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLI

Query:  SIIQSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQSAPLLSSSLDFLYTGVLDEEVGENDAIVPIIYE-EDDSDDKESGDEM
        SIIQSRGAILVCALPWLRGLL QHASRIMSQESSLLALNSLYQLIESRISTFQSA LLSSSLDFLYTGVLDEEV +NDAIVPIIYE EDDSDD+ESGDEM
Subjt:  SIIQSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQSAPLLSSSLDFLYTGVLDEEVGENDAIVPIIYE-EDDSDDKESGDEM

Query:  ETDEDDEENEDVEVAFEDLSAGEVDD
        ETDED+EE E+ E AF DLSAGEVDD
Subjt:  ETDEDDEENEDVEVAFEDLSAGEVDD

XP_023513462.1 WD repeat-containing protein 43 [Cucurbita pepo subsp. pepo]

1.6e-279

84.1

Show/hide

Query:  MKKEILKSPPITAFTPDGDFLAILSSNGT--IWSTSDGSLLAEWKDTEGKTDVGYSCMACYFVGKKGKNSSCVIAMGTNNGDVLAVNASSGETKWVSAGC
        MK E+ KSPPITAFTP+GD+LAILSSNGT  IW+TSDGSLLAEWKD +G+TD GYSC+AC FVGKK KNSSC+IA+GTN GDVLAVNASSGE KWVSAGC
Subjt:  MKKEILKSPPITAFTPDGDFLAILSSNGT--IWSTSDGSLLAEWKDTEGKTDVGYSCMACYFVGKKGKNSSCVIAMGTNNGDVLAVNASSGETKWVSAGC

Query:  HLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSISDDAKAII
        HLGGVIGLSFA+KGRR+HTVGSNGMAF+M+ ETGSII EFKASKKSISSSAFS DEKY+AVAGKKLKILSTDNG ELM HPDKLGPVKL SIS+DAK II
Subjt:  HLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSISDDAKAII

Query:  TSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNRIS
        TSE GAKH+QVWWCD+SAGKLSRGPVLSMKHPPFVSECRNI N E++IVVLSVSVSGVAYLWKLKFLSE + SPTKVTVK N+++SAEE+HGSAKKNRIS
Subjt:  TSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNRIS

Query:  VIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQNDDSSEQGPHVIEQAVTTPKSKKSKKKRAAFDLDSLTAGDVSDVGNGN
        VI+S IQGL DNEVSVLVTHGSMDLPQH+V NIGY AKED + A EK           +GPH IEQAVT+PKSKKSKKKRAA DLDS TAGDVSDVGN +
Subjt:  VIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQNDDSSEQGPHVIEQAVTTPKSKKSKKKRAAFDLDSLTAGDVSDVGNGN

Query:  ASDVLFNDDLNEPTMGEKLASLNLEDQNEEEGREQ-EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISI
         S+VLFNDDLNEPTMG+KLASLNLEDQNE+E  EQ EPSVPAIPPSADSVQVLLKQAL ADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH+LISI
Subjt:  ASDVLFNDDLNEPTMGEKLASLNLEDQNEEEGREQ-EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISI

Query:  IQSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQSAPLLSSSLDFLYTGVLDEEVGENDAIVPIIYEEDDSDDKE-SGDEMET
        IQSRGAILVCA+PWLRGLL QHASRIMSQESSLLALNSLYQLIESRISTFQSA LLSSSLDFLYTGVLD+E  ENDAIVPIIYEEDDSDDKE SGDEMET
Subjt:  IQSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQSAPLLSSSLDFLYTGVLDEEVGENDAIVPIIYEEDDSDDKE-SGDEMET

Query:  DEDDEENEDVEV-AFEDLSAGEVDDDMNE
           DEE   VEV AF+DLSAGEVDDDM+E
Subjt:  DEDDEENEDVEV-AFEDLSAGEVDDDMNE

XP_038899613.1 WD repeat-containing protein 43 [Benincasa hispida]

1.7e-297

86.9

Show/hide

Query:  MKKEILKSPPITAFTPDGDFLAILSSNGT--IWSTSDGSLLAEWKDTEGKTDVGYSCMACYFVGKKGKNSSCVIAMGTNNGDVLAVNASSGETKWVSAGC
        MKKEILKSPPITAFTPDGD+LAILSSNGT  IWST DGSLLAEWKD +GK DVGYSCMAC F GKK KNS CV+A+GTN+GDVLAVNAS+GE KWVSAGC
Subjt:  MKKEILKSPPITAFTPDGDFLAILSSNGT--IWSTSDGSLLAEWKDTEGKTDVGYSCMACYFVGKKGKNSSCVIAMGTNNGDVLAVNASSGETKWVSAGC

Query:  HLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSISDDAKAII
        HLGGVIGLSFANKGRR+H VGSNG   EMDTETG+IIKEFKASKKSISSS+FSLDEKY+AVAGKKLKILS D+GDELM HPDKLGPVKLVS+SDDAK II
Subjt:  HLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSISDDAKAII

Query:  TSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNRIS
        TSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRN+ N+E+N+VVLSVSVSGVAYLWKLK LSEDE SPTKV+VK ND QSAEENHGSAKKNR+S
Subjt:  TSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNRIS

Query:  VIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQNDDSSEQGPHVIEQAVTTPKSKKSKKKRAAFDLDSLTAGDVSDVGNGN
        VIASRI G+ DNEVSVLVTHGSMDLPQHS+F+IGYS KED +TA   KTLQQNDD SEQGPH +EQ V TPKSKK KKKRAA DLDSLT GD+SDVGNG+
Subjt:  VIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQNDDSSEQGPHVIEQAVTTPKSKKSKKKRAAFDLDSLTAGDVSDVGNGN

Query:  ASDVLFNDDLNEPTMGEKLASLNLEDQNEEEGREQEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISII
        ASDV+FNDDLNEP+MGEKLASLNL DQNE+EGRE+EPSVPAIPPSADSVQVLLKQALHA+DR LLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLIS I
Subjt:  ASDVLFNDDLNEPTMGEKLASLNLEDQNEEEGREQEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISII

Query:  QSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQSAPLLSSSLDFLYTGVLDEEVGENDAIVPIIYEEDDSDDKESGDEMETDE
        QSRGAILVC LPWLRGLL QHAS+IMSQESSLLALNSLYQLIESRISTFQSA LLSSSLDFLY+GVLDEEV ENDAIVPIIYEEDDSDDKESGDEMETDE
Subjt:  QSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQSAPLLSSSLDFLYTGVLDEEVGENDAIVPIIYEEDDSDDKESGDEMETDE

Query:  DDEENEDVEVAFEDLSAGEVDDDMNE
         DEE ++VE AF+DLSAGEVDDDM+E
Subjt:  DDEENEDVEVAFEDLSAGEVDDDMNE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KBW9 Utp12 domain-containing protein

9.4e-278

82.3

Show/hide

Query:  MKKEILKSPPITAFTPDGDFLAILSSNGT--IWSTSDGSLLAEWKDTEGKTDVGYSCMACYFVGKKGKNSSCVIAMGTNNGDVLAVNASSGETKWVSAGC
        MK EILKS PI AFTPDGD+LAI+SSNGT  IWST DGSLLAEWKD +GK D GYSCMAC F+GKK K+S CV+A+GTN+GDVLAVNAS+GE KWVSAGC
Subjt:  MKKEILKSPPITAFTPDGDFLAILSSNGT--IWSTSDGSLLAEWKDTEGKTDVGYSCMACYFVGKKGKNSSCVIAMGTNNGDVLAVNASSGETKWVSAGC

Query:  HLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSISDDAKAII
        H GGVIGLSFANKG R+ TVGSNGMA EMDTETG+IIKEFKASKKSISSSAFSLDE+Y+ VAGKKLKILSTD+GDEL+ HPDKLGPVKLVS+SDDAK II
Subjt:  HLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSISDDAKAII

Query:  TSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNRIS
        TSELGAKHLQVWWC++SAGK SRGP+LSMKHPPFVSECRN+ N+E+++VVLSVSVSG AYLWKLK LSEDE +PTKV+VK ND QSAEENHGSAKKNR S
Subjt:  TSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNRIS

Query:  VIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQNDDSSEQGPHVIEQAVTTPKSKKSKKKRAAFDLDSLTAGDVSDVGNGN
        V+ASRI G+ DNEVSVLVTHGS+DLPQH++ +IGY+ KED +TAHE KTLQQND  SEQGPH IEQ V TPKSKKSKKKRAA +LDSLTAGDVSDVGNG+
Subjt:  VIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQNDDSSEQGPHVIEQAVTTPKSKKSKKKRAAFDLDSLTAGDVSDVGNGN

Query:  ASDVLFNDDLNEPTMGEKLASLNLEDQNEEEGREQE-PSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISI
         SDVLFNDDLNEP+MGEKLASLNL DQN++ GREQE PSVP IPPSADSVQVLLKQALHADDRALLLECLYTKD KVISKSIAQLNSSDVL LLH+LIS 
Subjt:  ASDVLFNDDLNEPTMGEKLASLNLEDQNEEEGREQE-PSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISI

Query:  IQSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQSAPLLSSSLDFLYTGVLDEEVGENDAIVPIIYEEDDSDDKESGDEMETD
        IQSRGAILVCALPWLR L+ QHAS+IMSQESSLLALNSLYQLIESR STFQSA LLSSSLDFLYT VLD+E  +ND IVPIIYEE+DSD+ E+GDEMET+
Subjt:  IQSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQSAPLLSSSLDFLYTGVLDEEVGENDAIVPIIYEEDDSDDKESGDEMETD

Query:  EDDEENEDVEVAFEDLSAGEVDDDMNE
        EDDE +E VE AF+DLSAGEVDDDM+E
Subjt:  EDDEENEDVEVAFEDLSAGEVDDDMNE

A0A1S3CDX9 WD repeat-containing protein 43

4.7e-285

84.05

Show/hide

Query:  MKKEILKSPPITAFTPDGDFLAILSSNGT--IWSTSDGSLLAEWKDTEGKTDVGYSCMACYFVGKKGKNSSCVIAMGTNNGDVLAVNASSGETKWVSAGC
        MKKEILKSPPITAFTPDGD+LAI SSNGT  IWST DGSLLAEWKD +GK D GYSCMAC  +GKK K+S C++A+GTNNGDVLAVNAS+GE KWVS GC
Subjt:  MKKEILKSPPITAFTPDGDFLAILSSNGT--IWSTSDGSLLAEWKDTEGKTDVGYSCMACYFVGKKGKNSSCVIAMGTNNGDVLAVNASSGETKWVSAGC

Query:  HLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSISDDAKAII
        H GGVIGLSFAN+GRR+HTVGSNGMA EMDTETG+IIKEFKASKKSISSSAFSLDEKY+AVAGKKLKILS D+GDEL+ HPDKL PVKLVSISDDAK I+
Subjt:  HLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSISDDAKAII

Query:  TSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNRIS
        TSELGAKHLQVWWCDMSAGK SRGPVLSM HPPFVSECRN+ N+E+++VVLSVSVSG AYLWKLK LSEDE  PTKV+VK ND QSAEENHGSAKKNR+S
Subjt:  TSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNRIS

Query:  VIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQNDDSSEQGPHVIEQAVTTPKSKKSKKKRAAFDLDSLTAGDVSDVGNGN
        V+AS+I  + DNEVSVLVTHGS+DLPQHS+ +IGY+ KED +TAHE KTLQQND  SEQGPH IEQ V TPKSKKSKKKRAA DLDS TAGDVSDVGNG+
Subjt:  VIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQNDDSSEQGPHVIEQAVTTPKSKKSKKKRAAFDLDSLTAGDVSDVGNGN

Query:  ASDVLFNDDLNEPTMGEKLASLNLEDQNEEEGREQE-PSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISI
        ASDV+FNDDLNEP+MGEKLASLNL DQNE+ GREQE PSVP IPPSADSVQVLLKQALHADD ALLLECLYTKDDKVISKSIAQLNSSDVLKLLHS+IS 
Subjt:  ASDVLFNDDLNEPTMGEKLASLNLEDQNEEEGREQE-PSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISI

Query:  IQSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQSAPLLSSSLDFLYTGVLDEEVGENDAIVPIIYEEDDSDDKESGDEMETD
        IQSRGAILVCALPWLRGLL QHAS+IMSQESSLLALNSLYQLIE+RISTFQSA LLSSSLDFLYTGVLDEE  +NDAIVPIIYEE+DSD+ E+GDEMETD
Subjt:  IQSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQSAPLLSSSLDFLYTGVLDEEVGENDAIVPIIYEEDDSDDKESGDEMETD

Query:  EDDEENEDVEVAFEDLSAGEVDDDMNE
        EDDE +E VE AF+DLSAGEVDDDM+E
Subjt:  EDDEENEDVEVAFEDLSAGEVDDDMNE

A0A6J1D938 WD repeat-containing protein 43

8.8e-292

87.86

Show/hide

Query:  MKKEILKSPPITAFTPDGDFLAILSSNGT--IWSTSDGSLLAEWKDTEGKTDVGYSCMACYFVGKK--GKNSSCVIAMGTNNGDVLAVNASSGETKWVSA
        MKKE+LKSPPITAFTPDGD+LAILS N T  IWS  DGSLLAEWKD+EGKTDVGYSC+AC FV KK   K SSCVIA+GT+NGDVLAVNASSGETKWVSA
Subjt:  MKKEILKSPPITAFTPDGDFLAILSSNGT--IWSTSDGSLLAEWKDTEGKTDVGYSCMACYFVGKK--GKNSSCVIAMGTNNGDVLAVNASSGETKWVSA

Query:  GCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSISDDAKA
        GCH+GGVIGLSFANKGRR+ TVGSNGMA EMDTETG+IIKEFKASKKSISSSAFS DEKY+AVAGKKL+ILSTDNGDELM H DKLGPVKLVSISDDAKA
Subjt:  GCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSISDDAKA

Query:  IITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNR
        IITSE GAKHLQVWWCDMSA KLSRGPVLSMKHPPFVSEC+NI NEE++IVVLSVSVSGVAY+W+LK LSEDE SP KVTVK ND QSAEENHGSAKKNR
Subjt:  IITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNR

Query:  ISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQNDDSSEQGPHVIEQAVTTPKSKKSKKKRAAFDLDSLTAGDVSDVGN
        ISVIASRI G  DNEVSVLVTHGSMD PQ S+FNIGYS KED +TAHEKKTLQQNDD S QGPH IEQAVTTPKSKKSKKKRAA D+DSLTAGDVS VGN
Subjt:  ISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQNDDSSEQGPHVIEQAVTTPKSKKSKKKRAAFDLDSLTAGDVSDVGN

Query:  GNASDVLFNDDLNEPTMGEKLASLNLEDQNEEEGREQ-EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLI
        G+ASDVLFNDD+NEPTMGEKLASLNL DQ+E+E  EQ EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLI
Subjt:  GNASDVLFNDDLNEPTMGEKLASLNLEDQNEEEGREQ-EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLI

Query:  SIIQSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQSAPLLSSSLDFLYTGVLDEEVGENDAIVPIIYE-EDDSDDKESGDEM
        SIIQSRGAILVCALPWLRGLL QHASRIMSQESSLLALNSLYQLIESRISTFQSA LLSSSLDFLYTGVLDEEV +NDAIVPIIYE EDDSDD+ESGDEM
Subjt:  SIIQSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQSAPLLSSSLDFLYTGVLDEEVGENDAIVPIIYE-EDDSDDKESGDEM

Query:  ETDEDDEENEDVEVAFEDLSAGEVDD
        ETDED+EE E+ E AF DLSAGEVDD
Subjt:  ETDEDDEENEDVEVAFEDLSAGEVDD

A0A6J1HJF3 WD repeat-containing protein 43 isoform X1

2.9e-279

84.1

Show/hide

Query:  MKKEILKSPPITAFTPDGDFLAILSSNGT--IWSTSDGSLLAEWKDTEGKTDVGYSCMACYFVGKKGKNSSCVIAMGTNNGDVLAVNASSGETKWVSAGC
        MK E  KSPPITAFTP+GD+LAILSSNGT  IW+TSDGSLLAEWKD +GKTD GYSC+AC FVGKK KNSSC+IA+GTN GDVL VNASSGETKWVSAGC
Subjt:  MKKEILKSPPITAFTPDGDFLAILSSNGT--IWSTSDGSLLAEWKDTEGKTDVGYSCMACYFVGKKGKNSSCVIAMGTNNGDVLAVNASSGETKWVSAGC

Query:  HLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSISDDAKAII
        HLGGVIGLSFA+KGRR+HTVGSNG+AF+M+ ETGSII EFKASKKSISSSAFSLDEKY+AVAGKKLKILSTD+G ELM HPDKLGPVKL SISDDAK II
Subjt:  HLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSISDDAKAII

Query:  TSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNRIS
        TSE GAKH+QVWWCDMSAGKLSRGPVLSMKHPPFVSECRNI N E++IVVLSVSVSGVAYLWKLKFLSED+ +PTKVTVK N+++SAEENHGSAKKNRIS
Subjt:  TSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNRIS

Query:  VIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQNDDSSEQGPHVIEQAVTTPKSKKSKKKRAAFDLDSLTAGDVSDVGNGN
        V++S IQGL DNEVSVLVTHGSMDLPQH+V NIGY AKED + A EK           +GPH I+QAVT+PKSKKSKKKRAA DLDS  AGDVSDVGN +
Subjt:  VIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQNDDSSEQGPHVIEQAVTTPKSKKSKKKRAAFDLDSLTAGDVSDVGNGN

Query:  ASDVLFNDDLNEPTMGEKLASLNLEDQNEEEGREQ-EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISI
         S+VLFNDDLNEPTMG+KLASLNLE+QNE+E  EQ EPSVPAIPPSADSVQVLLKQAL ADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH+LISI
Subjt:  ASDVLFNDDLNEPTMGEKLASLNLEDQNEEEGREQ-EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISI

Query:  IQSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQSAPLLSSSLDFLYTGVLDEEVGENDAIVPIIYEEDDSDDKE-SGDEMET
        IQSRGAILVCA+PWLRGLL QHASRIMSQESSLLALNSLYQLIESRISTFQSA LLSSSLDFLYTGVLDEE  ENDAIVPIIYEEDDSDDKE SGDEMET
Subjt:  IQSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQSAPLLSSSLDFLYTGVLDEEVGENDAIVPIIYEEDDSDDKE-SGDEMET

Query:  DEDDEENEDVEV-AFEDLSAGEVDDDMNE
           DEE   VEV AF+DLSAGEVDDDM+E
Subjt:  DEDDEENEDVEV-AFEDLSAGEVDDDMNE

A0A6J1KMD0 WD repeat-containing protein 43

2.8e-274

82.32

Show/hide

Query:  MKKEILKSPPITAFTPDGDFLAILSSNGT--IWSTSDGSLLAEWKDTEGKTDVGYSCMACYFVGKKGKNSSCVIAMGTNNGDVLAVNASSGETKWVSAGC
        MK E+ KSPPITAFT +GD+LAILSSNGT  IW TSDGSLLAEWKD +GKTD GYSC+AC FVGKK KNSSC+IA+GTN GDVLAVNASSGETKWVSAGC
Subjt:  MKKEILKSPPITAFTPDGDFLAILSSNGT--IWSTSDGSLLAEWKDTEGKTDVGYSCMACYFVGKKGKNSSCVIAMGTNNGDVLAVNASSGETKWVSAGC

Query:  HLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSISDDAKAII
        HLGG+IGLSFA+KGRR+HT+GSNGMAF+M+ ETGSII EFKASKKSISSSAFSLDEKY+AVAGKKLKILSTDNG ELM HPDKLGPVKL SISDDAK II
Subjt:  HLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSISDDAKAII

Query:  TSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNRIS
        TSE GAKH+QVWWCDMSAGKLSRGPVLSMKHPPF+SECRN+ N E++IVVLSVSVSGVAYLWKLKFLSED+ SPTKVTVK N+++SAEENHGSAKKNRIS
Subjt:  TSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNRIS

Query:  VIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQNDDSSEQGPHVIEQAVTTPKSKKSKKKRAAFDLDSLTAGDVSDVGNGN
        V++S IQGL DNEVSVLVTHGSMDLPQH+V NI                        ++GPH IEQAVT+PKSKKSKKKRAA DLDS TAGDVSDVGN +
Subjt:  VIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQNDDSSEQGPHVIEQAVTTPKSKKSKKKRAAFDLDSLTAGDVSDVGNGN

Query:  ASDVLFNDDLNEPTMGEKLASLNLEDQNEEEGREQ-EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISI
         S+VLFNDDLNEPTMG+KLA+LNLE+QNE+E  EQ EPSVPAIPPSADSVQVLLKQAL ADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH+LISI
Subjt:  ASDVLFNDDLNEPTMGEKLASLNLEDQNEEEGREQ-EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISI

Query:  IQSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQSAPLLSSSLDFLYTGVLDEEVGENDAIVPIIYEEDDSDDKE-SGDEMET
        IQSRGAILVCA+PWLRGLL QHASRIMSQESSLLALNSLYQLIESRISTFQSA LLSSSLDFLYTGVLD E  ENDAIVPIIYEEDDSDDKE SGDEMET
Subjt:  IQSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQSAPLLSSSLDFLYTGVLDEEVGENDAIVPIIYEEDDSDDKE-SGDEMET

Query:  DEDDEENEDVEVAFEDLSAGEVDDDMNE
        DE+     +VE AF+DLSAGEVDDDM+E
Subjt:  DEDDEENEDVEVAFEDLSAGEVDDDMNE

SwissProt top hits

e value

%identity

Alignment

Q15061 WD repeat-containing protein 43

1.2e-06

21.93

Show/hide

Query:  NSSCVIAMGTNNGDVLAVNASSGE--TKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKL
        N + ++A+GT  G +L  +   GE  +K +S G H   V  + +      +++   +    E + +T  +  ++K    S+SS   S D K +  AG+ +
Subjt:  NSSCVIAMGTNNGDVLAVNASSGE--TKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKL

Query:  KILSTDNGD---ELMAHPDKLGPVKLVSISDDAKA----------IITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSV
        K+   +  +       H   +  +   +I    ++           ++  +  + L VW       + S     ++   P   +     N+E  + +  V
Subjt:  KILSTDNGD---ELMAHPDKLGPVKLVSISDDAKA----------IITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSV

Query:  SVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQN
           G  +L++            K       IQ A    G  KK+    I     G   +++S+L+ +GS   P  ++  +  +++       E       
Subjt:  SVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQN

Query:  DDSSEQGPHVIEQAVTTPKS--KKSKKKRAAFDLDSLTAGDVSDVGNGNASDVLFNDDLNEPTMGEKLASLNLEDQNEEEGREQEPSVPAIPPSADSVQV
        D S+   P V E A+T  ++    S+ K     +    A            +       NE ++ E+L +++++    ++G+E            +S  V
Subjt:  DDSSEQGPHVIEQAVTTPKS--KKSKKKRAAFDLDSLTAGDVSDVGNGNASDVLFNDDLNEPTMGEKLASLNLEDQNEEEGREQEPSVPAIPPSADSVQV

Query:  LLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQS
        LL Q L ++D  +L + L T++  +I K++ ++    ++ LL  L   +Q      V  + WL+ +L  HAS + +    +  L +LYQL+ESR+ TFQ 
Subjt:  LLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQS

Query:  APLLSSSLDFLYTGVLDEEVGENDAI----VPIIYEEDDSDDKESGDEMETDEDDEENEDVEVAFEDLSAGEVDDDMNE
           L   L  L T V   E  +          ++YEE+ S++ ES DE+  D+D E+N D +   E+ S  E D+D+ E
Subjt:  APLLSSSLDFLYTGVLDEEVGENDAI----VPIIYEEDDSDDKESGDEMETDEDDEENEDVEVAFEDLSAGEVDDDMNE

Q6ZQL4 WD repeat-containing protein 43

4.0e-07

21.53

Show/hide

Query:  AFTPDGD-FLAILSSNG--TIWSTSDGSLLAEWKDTEGKTDVGYSCMACYFVGKKGKNS----------------SCVIAMGTNNGDVLAVNASSGET-K
        AF+PD   + A+ SS+G   +W T++  L  E+  +   +    +C+A      + K S                + ++A+GT  G +L  +   GE   
Subjt:  AFTPDGD-FLAILSSNG--TIWSTSDGSLLAEWKDTEGKTDVGYSCMACYFVGKKGKNS----------------SCVIAMGTNNGDVLAVNASSGET-K

Query:  WVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKLKILSTDNGD---ELMAHPDKLGPVKLVS
         +++G H   V  + +      +++   +    E  T+T  +  ++K    S+SS   S D K +  AG+ +K+   +  +       H   +  ++  +
Subjt:  WVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKLKILSTDNGD---ELMAHPDKLGPVKLVS

Query:  I-------SDDAKAI--ITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGN
        I       SD    +  ++  +  + L VW       + S     ++   P   +     N+E  + +  V   G  +L++            K      
Subjt:  I-------SDDAKAI--ITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGN

Query:  DIQSAEENHGSAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQNDDSSEQGPHVIEQAVTTPKS--KKSKKKR
         IQ A    G  KK     I         +++S+L+ +G+   P  ++  +  ++K DT    E+       D S      +E A+T  K+    S+ K 
Subjt:  DIQSAEENHGSAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQNDDSSEQGPHVIEQAVTTPKS--KKSKKKR

Query:  AAFDLDSLTAGDVSDVGNGNASDVLFNDDLNEPTMGEKLASLNLEDQNEEEGREQEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKS
            +    A           ++        E T+ E+L +++L    + +GR+ +          +S  VLL Q L ++D  +L + L TK+  +I ++
Subjt:  AAFDLDSLTAGDVSDVGNGNASDVLFNDDLNEPTMGEKLASLNLEDQNEEEGREQEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKS

Query:  IAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQSAPLLSSSLDFLYTGVLDEEVGEN----DA
        + ++    V+ LL  L   +Q         + WL+ +L  HAS + +    +  L +LYQL+ESR+ TFQ    L   L  L T V   E  +       
Subjt:  IAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQSAPLLSSSLDFLYTGVLDEEVGEN----DA

Query:  IVPIIYEEDDSDDKESGDEMETDEDDEENEDVEVAFE-----DLSAGEVDDDMNE
           ++YEE+ S+++   +  E D DD  +ED +   E     D    E D+DM +
Subjt:  IVPIIYEEDDSDDKESGDEMETDEDDEENEDVEVAFE-----DLSAGEVDDDMNE

Arabidopsis top hits

e value

%identity

Alignment

AT1G15420.1 CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12 (InterPro:IPR007148); Has 764 Blast hits to 656 proteins in 193 species: Archae - 0; Bacteria - 42; Metazoa - 237; Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes - 223 (source: NCBI BLink).

2.4e-47

47.27

Show/hide

Query:  SSEQGPHVIEQAVTTPKSKKSKKKRAAFDLDSLTAGDVSDVGNGNASDVLFNDDLNEPTMGEKLASLNL---EDQNEEEGREQEPSVPAIPPSADSVQVL
        SS+    + +  +   K KK  KKRA  + D  +  D     + +   VL +D LNEPT+G+KL SL+L   E  N EE           PP+A SV VL
Subjt:  SSEQGPHVIEQAVTTPKSKKSKKKRAAFDLDSLTAGDVSDVGNGNASDVLFNDDLNEPTMGEKLASLNL---EDQNEEEGREQEPSVPAIPPSADSVQVL

Query:  LKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQSA
        L+QALHADDR+LLL+CLY +D++VI+ S+A+LNS++VLKLL++L+ I+QSRGAIL C +PW++ LL  H+S IMSQESSLLALN++YQLIESR+ST  +A
Subjt:  LKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQSA

Query:  PLLSSSLDFLYTGVLDEEVGENDAIVPIIYEEDDSD-DKESGDEMETDEDDEENEDVEVAFEDLSAGEVDDDMNE
          +SS LD L    LDEE  E     P+IYE+ DSD D+E G E   + D+E ++  + A + ++  E  DDM++
Subjt:  PLLSSSLDFLYTGVLDEEVGENDAIVPIIYEEDDSD-DKESGDEMETDEDDEENEDVEVAFEDLSAGEVDDDMNE

AT5G11240.1 transducin family protein / WD-40 repeat family protein

1.9e-33

25.73

Show/hide

Query:  ITAFTPDGDFLAILSSNG--TIWSTSDGSLLAEWKDT-------------EGKTDVGYSCMACYFVGKKGKN--SSCVIAMGTNNGDVLAVNASSGETKW
        +T+F+P  D+LA+ + +G   IW T  G +  E+ D              +G   V Y+CM    + KK K    + V+ +GT  GDVLA++ +SG+ KW
Subjt:  ITAFTPDGDFLAILSSNG--TIWSTSDGSLLAEWKDT-------------EGKTDVGYSCMACYFVGKKGKN--SSCVIAMGTNNGDVLAVNASSGETKW

Query:  VSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSISDD
          + CH GGV  +S + K   +++ G++GM  ++D  +G++I++FKAS K++SS   S D K +  A  +LK  +  +  ++       G V+ V+ ++D
Subjt:  VSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSISDD

Query:  AKAIITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSVSVSGVAYLWKLKFLSE-DEASPTKVTVKGNDIQSAEENHGSA
         K +++S +G +++ VW  D  A K S   VL+++HPP   +     NE+  + VL++S  GV Y W    + E   A+PTKV      + +A+ +    
Subjt:  AKAIITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNICNEENNIVVLSVSVSGVAYLWKLKFLSE-DEASPTKVTVKGNDIQSAEENHGSA

Query:  KKNRISVIASRIQG-LRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQNDD----SSEQGPHVIEQAVTTPKSKKSKKKRAAFDLDSLT
        K +   + A+++QG L+       +  G +  P                 + +K  LQ  +D    +S+ G   I   +T   SK SK++          
Subjt:  KKNRISVIASRIQG-LRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDTDTAHEKKTLQQNDD----SSEQGPHVIEQAVTTPKSKKSKKKRAAFDLDSLT

Query:  AGDVSDVGNGNASDVLFN----DDLNEPTMGEKLASLNLEDQNE---EEGREQEPSVPAIPPSADSVQVLLKQALHAD-DRALLLECLYTK---DDKVIS
           V+ +   +A D L       DL+E    +K   L+  D++    ++         ++     S+ +L     H +   A +++    K     K + 
Subjt:  AGDVSDVGNGNASDVLFN----DDLNEPTMGEKLASLNLEDQNE---EEGREQEPSVPAIPPSADSVQVLLKQALHAD-DRALLLECLYTK---DDKVIS

Query:  KSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLFQHASRIMSQE-SSLLALNSLYQLIESRISTFQSAPLLSSSLDFLYTGVLDEEVGENDAI
         ++  +  S   K L +L ++ Q+R       LPW+  ++  H+  IMSQE  +   LN+L ++ +SR +  Q    LS  L  L T  +++  G    I
Subjt:  KSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLFQHASRIMSQE-SSLLALNSLYQLIESRISTFQSAPLLSSSLDFLYTGVLDEEVGENDAI

Query:  VPIIYEEDDSDDKESGDEMETDEDDEENEDVEVAFEDLSAGEVDDDMNE
             E D+S+D+E  +++E     E + + +++ +D    + DD + E
Subjt:  VPIIYEEDDSDDKESGDEMETDEDDEENEDVEVAFEDLSAGEVDDDMNE

Sequences

Show/hide sequences

CDS sequence

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ATGAAGAAGGAAATCCTTAAATCGCCGCCCATCACAGCTTTCACTCCCGATGGCGACTTTCTAGCCATCTTGTCATCCAATGGAACTATTTGGAGTACTAGTGATGGGAG
TTTACTGGCAGAATGGAAGGATACTGAGGGAAAAACTGATGTTGGTTATTCCTGTATGGCCTGCTATTTTGTGGGGAAGAAGGGTAAAAACAGTTCTTGTGTAATTGCTA
TGGGTACCAATAATGGGGATGTGTTGGCTGTAAATGCTTCAAGCGGTGAGACGAAGTGGGTTTCTGCTGGTTGCCATCTTGGTGGAGTTATTGGCCTTTCTTTTGCGAAC
AAAGGCCGTAGAGTGCATACGGTTGGAAGTAATGGAATGGCGTTCGAGATGGACACTGAAACAGGAAGCATTATCAAGGAGTTCAAAGCTTCTAAAAAATCAATCTCCTC
TTCAGCCTTTTCACTTGATGAGAAGTACGTAGCTGTAGCTGGCAAAAAGTTGAAGATTTTAAGCACAGATAATGGGGATGAGCTTATGGCACACCCTGATAAATTGGGTC
CTGTGAAGCTTGTTTCTATATCTGATGATGCTAAAGCAATAATTACATCAGAACTTGGAGCCAAACATCTTCAAGTGTGGTGGTGTGATATGAGTGCTGGAAAACTTAGT
AGAGGTCCTGTTCTGTCGATGAAGCATCCTCCATTTGTTTCTGAATGCAGAAATATTTGCAATGAAGAAAATAACATAGTTGTCTTGTCAGTATCAGTATCAGGTGTAGC
TTATTTATGGAAATTAAAGTTCCTATCAGAAGACGAGGCTAGTCCAACTAAAGTCACTGTTAAAGGCAATGACATCCAATCAGCCGAGGAAAACCATGGAAGTGCTAAGA
AAAATCGAATTTCTGTCATCGCTTCCAGAATACAAGGTTTAAGAGACAATGAAGTGTCAGTTCTTGTTACTCATGGCTCCATGGACCTACCACAGCATAGTGTTTTTAAT
ATTGGTTATTCCGCAAAGGAAGATACAGATACTGCGCATGAGAAAAAGACACTCCAACAAAATGATGATTCTTCCGAACAAGGTCCCCATGTGATCGAACAAGCAGTTAC
TACACCTAAAAGTAAGAAAAGCAAAAAGAAAAGAGCAGCATTTGATCTTGATAGTCTGACAGCTGGAGATGTCAGTGACGTTGGCAATGGCAATGCTTCCGATGTTCTAT
TTAACGATGATTTAAATGAGCCAACTATGGGAGAGAAACTTGCAAGTTTGAATTTGGAGGACCAGAATGAAGAGGAAGGTCGTGAACAAGAACCATCCGTCCCTGCGATA
CCACCAAGTGCGGACTCTGTTCAGGTTTTGCTTAAGCAAGCACTACATGCAGACGATCGTGCCCTTTTGCTAGAATGCTTATATACAAAGGATGATAAGGTTATTTCAAA
ATCAATAGCACAATTAAATTCATCTGATGTTCTCAAGCTTTTACACTCTCTGATATCCATTATTCAATCGAGAGGGGCCATTCTTGTATGTGCCCTCCCTTGGCTGAGAG
GTTTACTTTTCCAACATGCTAGTAGAATAATGTCTCAAGAATCTTCTCTACTCGCCTTGAATTCTCTATATCAGCTCATTGAGTCTAGAATTTCAACTTTCCAATCCGCT
CCATTGCTATCGAGTAGCTTAGACTTCCTTTACACAGGGGTCCTTGATGAGGAGGTGGGCGAAAATGATGCCATTGTGCCGATTATTTACGAGGAGGACGATAGCGACGA
TAAGGAATCGGGAGATGAAATGGAAACTGATGAAGATGATGAAGAGAATGAAGATGTAGAAGTAGCCTTTGAGGATCTTAGTGCTGGTGAAGTGGATGATGACATGAATG
AATGA

mRNA sequence

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Protein sequence

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MKKEILKSPPITAFTPDGDFLAILSSNGTIWSTSDGSLLAEWKDTEGKTDVGYSCMACYFVGKKGKNSSCVIAMGTNNGDVLAVNASSGETKWVSAGCHLGGVIGLSFAN
KGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLDEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSISDDAKAIITSELGAKHLQVWWCDMSAGKLS
RGPVLSMKHPPFVSECRNICNEENNIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFN
IGYSAKEDTDTAHEKKTLQQNDDSSEQGPHVIEQAVTTPKSKKSKKKRAAFDLDSLTAGDVSDVGNGNASDVLFNDDLNEPTMGEKLASLNLEDQNEEEGREQEPSVPAI
PPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLFQHASRIMSQESSLLALNSLYQLIESRISTFQSA
PLLSSSLDFLYTGVLDEEVGENDAIVPIIYEEDDSDDKESGDEMETDEDDEENEDVEVAFEDLSAGEVDDDMNE

Spg014655 (gene) of Sponge gourd (cylindrica) v1 genome