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Spg014676 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg014676
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold3:33716470..33719763
RNA-Seq ExpressionSpg014676
SyntenySpg014676
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011470502.1 PREDICTED: uncharacterized protein LOC105353223 [Fragaria vesca subsp. vesca]1.6e-1726.98Show/hide
Query:  SGRWNRHLIKRIFHPIDAKDILSIPCGSPLAKDEIIWSLDSKGRFSMKNVYRLVMELESKSNPSPSCSSVG------RRGWKAPEIPKAKITAWRIVKDI
        SG W + ++K +F  ++A+ I  IP      +D  +W  D KG +S+++ Y +  ++E  +  + S SS G      ++ WK    PK ++ AWRI++++
Subjt:  SGRWNRHLIKRIFHPIDAKDILSIPCGSPLAKDEIIWSLDSKGRFSMKNVYRLVMELESKSNPSPSCSSVG------RRGWKAPEIPKAKITAWRIVKDI

Query:  IPTSYNIRKKGVIYNPLCLFCASKVETSVHNSSPSSIEEISRDIDMVWE-DLLEPLPSAELSKKM----------------ENRMIHQPWKPPPADCWKL
        +PT + ++KKGV  +  C FC    E  +H      I +  R ++ +WE   L   PS   + ++                ++R  H  W+ PP+   K+
Subjt:  IPTSYNIRKKGVIYNPLCLFCASKVETSVHNSSPSSIEEISRDIDMVWE-DLLEPLPSAELSKKM----------------ENRMIHQPWKPPPADCWKL

Query:  NSDASISASGSGCDVGWVVRDSSSSLICGGALSIKDIWSVNSLEALTIREGL
        N D S         +G VVRD++       A  I    S    E   +R GL
Subjt:  NSDASISASGSGCDVGWVVRDSSSSLICGGALSIKDIWSVNSLEALTIREGL

XP_012851712.1 PREDICTED: uncharacterized protein LOC105971405 [Erythranthe guttata]9.3e-1826.99Show/hide
Query:  VNNDFKGRFVSNLKDVSGRWNRHLIKRIFHPIDAKDILSIPCGSPLAKDEIIWSLDSKGRFSMKNVYRLVME-----LESKSNPSPSCSSVGRRGWK---
        +++ F  R    ++  SG W+  ++  +F P+D + IL++P GS +AKD  IW     G F++++ Y  ++      +  + N S S S V ++ WK   
Subjt:  VNNDFKGRFVSNLKDVSGRWNRHLIKRIFHPIDAKDILSIPCGSPLAKDEIIWSLDSKGRFSMKNVYRLVME-----LESKSNPSPSCSSVGRRGWK---

Query:  -APEIPKAKITAWRIVKDIIPTSYNIRKKGVIYNPLCLFCASKVETSVH------------NSSP---------SSI-----------------------
          P  PK ++  WR+  +IIPT+  + ++ +  +PLC  C  + ET +H             S P         SSI                       
Subjt:  -APEIPKAKITAWRIVKDIIPTSYNIRKKGVIYNPLCLFCASKVETSVH------------NSSP---------SSI-----------------------

Query:  -------------EEISRDIDMV-W-EDLLEPLPSAELSKKMENRMIH-QPWKPPPADCWKLNSDASISASGSGCDVGWVVRDSSSSLI
                     EE+ +  D+V W    L    SA++      R IH   WKPPP++  KLN DA+     S   VG V RDS  S +
Subjt:  -------------EEISRDIDMV-W-EDLLEPLPSAELSKKMENRMIH-QPWKPPPADCWKLNSDASISASGSGCDVGWVVRDSSSSLI

XP_012857846.1 PREDICTED: uncharacterized protein LOC105977118 [Erythranthe guttata]2.7e-1726.64Show/hide
Query:  VNNDFKGRFVSNLKDVSGRWNRHLIKRIFHPIDAKDILSIPCGSPLAKDEIIWSLDSKGRFSMKNVYRLVME-----LESKSNPSPSCSSVGRRGWK---
        +++ F  R    ++  SG W+  ++  +F P+D + IL++P GS +AKD  IW     G F++++ Y  ++      +  + N S S S V ++ WK   
Subjt:  VNNDFKGRFVSNLKDVSGRWNRHLIKRIFHPIDAKDILSIPCGSPLAKDEIIWSLDSKGRFSMKNVYRLVME-----LESKSNPSPSCSSVGRRGWK---

Query:  -APEIPKAKITAWRIVKDIIPTSYNIRKKGVIYNPLCLFCASKVETSVH------------NSSP---------SSI-----------------------
          P  PK ++  WR+  +IIPT+  + ++ +  +PLC  C  + ET +H             S P         SSI                       
Subjt:  -APEIPKAKITAWRIVKDIIPTSYNIRKKGVIYNPLCLFCASKVETSVH------------NSSP---------SSI-----------------------

Query:  -------------EEISRDIDMV-W-EDLLEPLPSAELSKKMENRMIH-QPWKPPPADCWKLNSDASISASGSGCDVGWVVRDSSSSLI
                     EE+ +  D+V W    L    SA++      R IH   WKPPP++  KLN D +     S   VG V RDS  S +
Subjt:  -------------EEISRDIDMV-W-EDLLEPLPSAELSKKMENRMIH-QPWKPPPADCWKLNSDASISASGSGCDVGWVVRDSSSSLI

XP_023907861.1 uncharacterized protein LOC112019574 [Quercus suber]2.7e-1724.81Show/hide
Query:  WNRHLIKRIFHPIDAKDILSIPCGSPLAKDEIIWSLDSKGRFSMKNVYRLVM-----ELESKSNPSPSCSSVGRRGWKAPEIPKAKITAWRIVKDIIPTS
        WN  L++R F P +A  IL++P    L  D++IW  + KG F++K+ Y + +      L  +S+   SCS + R+ W    + K +I AWR   + +PT 
Subjt:  WNRHLIKRIFHPIDAKDILSIPCGSPLAKDEIIWSLDSKGRFSMKNVYRLVM-----ELESKSNPSPSCSSVGRRGWKAPEIPKAKITAWRIVKDIIPTS

Query:  YNIRKKGVIYNPLCLFCASKVETSVH---------------NSSPSSIEEISRDIDMVWEDLLEPLPSAELSKKM-------ENRMIH---------QPW
         N+R +GV  +  C  C   +E + H                + P  +   S D   +   +L    + +L   +        NR I            W
Subjt:  YNIRKKGVIYNPLCLFCASKVETSVH---------------NSSPSSIEEISRDIDMVWEDLLEPLPSAELSKKM-------ENRMIH---------QPW

Query:  KPPPADCWKLNSDASISASGSGCDVGWVVRDSSSSLICGGALSIKDIWSVNSLEALTIREGL
         PPP   +K+N D + S  G   ++G ++ DS+  ++      ++  + + ++EA+ I  G+
Subjt:  KPPPADCWKLNSDASISASGSGCDVGWVVRDSSSSLICGGALSIKDIWSVNSLEALTIREGL

XP_030930729.1 uncharacterized protein LOC115956517 [Quercus lobata]1.3e-1926.72Show/hide
Query:  RWNRHLIKRIFHPIDAKDILSIPCGSPLAKDEIIWSLDSKGRFSMKNVYRLVMELESKSNPSPS-----CSSVGRRGWKAPEIPKAKITAWRIVKDIIPT
        RW R  ++ I  P + + IL+IP    L +D IIW  + KG F +K+ Y +   +  K +   S     C+S+ +R W      K +I AWR+  + IPT
Subjt:  RWNRHLIKRIFHPIDAKDILSIPCGSPLAKDEIIWSLDSKGRFSMKNVYRLVMELESKSNPSPS-----CSSVGRRGWKAPEIPKAKITAWRIVKDIIPT

Query:  SYNIRKKGVIYNPLCLFCASKVETSVH---NSSPSSIEEISRD-----IDMVWE---DLLEPLPSAELSKKMENRMIHQPWKPPPADCWKLNSDASISAS
          N+ KKG+  +  C  C    ET  H   + S  ++ ++  +      ++VW     L+E    A +    +     + WKPPP D + +N D +I A 
Subjt:  SYNIRKKGVIYNPLCLFCASKVETSVH---NSSPSSIEEISRD-----IDMVWE---DLLEPLPSAELSKKMENRMIHQPWKPPPADCWKLNSDASISAS

Query:  GSGCDVGWVVRDSSSSLICGGALSIKDIWSVNSLEALTIREGLETLK
             +G ++RD ++ ++   +  +   ++V   EA+ + +G+   K
Subjt:  GSGCDVGWVVRDSSSSLICGGALSIKDIWSVNSLEALTIREGLETLK

TrEMBL top hitse value%identityAlignment
A0A2N9HPU0 Uncharacterized protein1.3e-1725Show/hide
Query:  KGRFVSNLKDVSGRWNRHLIKRIFHPIDAKDILSIPCGSPLAKDEIIWSLDSKGRFSMKNVYRLVME-----LESKSNPSPSCSSVGRRGWKAPEIPKAK
        K ++ S    +  +W+ HLI ++FHP DAK I SIP  +   KD + W     G +S+++ YR ++E     L S SNPS + + V R+ W      K +
Subjt:  KGRFVSNLKDVSGRWNRHLIKRIFHPIDAKDILSIPCGSPLAKDEIIWSLDSKGRFSMKNVYRLVME-----LESKSNPSPSCSSVGRRGWKAPEIPKAK

Query:  ITAWRIVKDIIPTSYNIRKKGVIYNPLCLFCASKVETSVH-------------------------------------NSSPSSIEEISRDIDMVWE----
        + AWR +KD +P+   + K+ V+ +P C  C+++ E  VH                                     + SP ++E  +     +W+    
Subjt:  ITAWRIVKDIIPTSYNIRKKGVIYNPLCLFCASKVETSVH-------------------------------------NSSPSSIEEISRDIDMVWE----

Query:  ------------------DLLEPLPSAELSKKMENRMIHQP---WKPPPADCWKLNSDASISASGSGCDVGWVVRDSSSSLICGGALSIKDIWSVNSLEA
                            LE    ++       R + QP   WK P    +K+N D +   +     +G V+RDS+   I   +  IK   SV ++EA
Subjt:  ------------------DLLEPLPSAELSKKMENRMIHQP---WKPPPADCWKLNSDASISASGSGCDVGWVVRDSSSSLICGGALSIKDIWSVNSLEA

Query:  LTIREGLE
        L  R  ++
Subjt:  LTIREGLE

A0A5E4GGB8 PREDICTED: reverse mRNAase (Fragment)2.9e-1730.69Show/hide
Query:  GPRIYIALFKSARSVSDKFCARNTSF-----PLYCGKGSLIPHLVNNDFKGRFVSNLKDVSGRWNRHLIKRIFHPIDAKDILSIPCGSPLAKDEIIWSLD
        G R  I   KS R   DK+  R  +F     PL   + + +  L+ N           + S +W+   +  +F P+D  DI+ IP       D I+W+ D
Subjt:  GPRIYIALFKSARSVSDKFCARNTSF-----PLYCGKGSLIPHLVNNDFKGRFVSNLKDVSGRWNRHLIKRIFHPIDAKDILSIPCGSPLAKDEIIWSLD

Query:  SKGRFSMKNVYRLVMELES-----KSNPSPSCSSVGRRGWKAPEIPKAKITAWRIVKDIIPTSYNIRKKGVIYNPLCLFCASKVETSVH
          G F++K+ YR+ + + S      S+ +   S + R  W A    K KI AWR+  DI+PT  N+ KKGV    +C+FC    E+++H
Subjt:  SKGRFSMKNVYRLVMELES-----KSNPSPSCSSVGRRGWKAPEIPKAKITAWRIVKDIIPTSYNIRKKGVIYNPLCLFCASKVETSVH

M5VU98 Reverse transcriptase domain-containing protein4.3e-2125.16Show/hide
Query:  GPRIYIALFKSARSVSDKFCARNTSF-----PLYCGKGSLIPHLVNNDFKGRFVSNLKDVSGRWNRHLIKRIFHPIDAKDILSIPCGSPLAKDEIIWSLD
        G R  I   KS R   DK+  R  +F     PL   + + +  L+ N           + S +W+   +  +F P+D  DI+ IP       D I+W+ D
Subjt:  GPRIYIALFKSARSVSDKFCARNTSF-----PLYCGKGSLIPHLVNNDFKGRFVSNLKDVSGRWNRHLIKRIFHPIDAKDILSIPCGSPLAKDEIIWSLD

Query:  SKGRFSMKNVYRLVMELESKSNPSPSCSS-----VGRRGWKAPEIPKAKITAWRIVKDIIPTSYNIRKKGVIYNPLCLFCASKVETSVH-----------
          G F++K+ YR+ + + S      S S+     + R  W A    K KI AWR+  DI+PT  N+ KKGV    +C+FC    E+++H           
Subjt:  SKGRFSMKNVYRLVMELESKSNPSPSCSS-----VGRRGWKAPEIPKAKITAWRIVKDIIPTSYNIRKKGVIYNPLCLFCASKVETSVH-----------

Query:  -------NSSPSSIEEISRDIDMVWEDLLEPLPSAELSKKMENRMIHQP--WKPPPADCWKLNSDASISASGSGCDVGWVVRDSSSSLICGGALSIKDIW
                 +   ++    ++    +  +    +A  +       +  P  W  PP+   K N D +   +     VG V RD+    +   A S+ ++ 
Subjt:  -------NSSPSSIEEISRDIDMVWEDLLEPLPSAELSKKMENRMIHQP--WKPPPADCWKLNSDASISASGSGCDVGWVVRDSSSSLICGGALSIKDIW

Query:  SVNSLEALTIREGL
        S    E L  REG+
Subjt:  SVNSLEALTIREGL

M5XHI9 Reverse transcriptase domain-containing protein5.7e-2125.16Show/hide
Query:  GPRIYIALFKSARSVSDKFCARNTSF-----PLYCGKGSLIPHLVNNDFKGRFVSNLKDVSGRWNRHLIKRIFHPIDAKDILSIPCGSPLAKDEIIWSLD
        G R  I   KS R   DK+  R  +F     PL   + + +  L+ N           + S +W+   +  +F P+D  DI+ IP       D I+W+ D
Subjt:  GPRIYIALFKSARSVSDKFCARNTSF-----PLYCGKGSLIPHLVNNDFKGRFVSNLKDVSGRWNRHLIKRIFHPIDAKDILSIPCGSPLAKDEIIWSLD

Query:  SKGRFSMKNVYRLVMELESKSNPSPSCSS-----VGRRGWKAPEIPKAKITAWRIVKDIIPTSYNIRKKGVIYNPLCLFCASKVETSVH-----------
          G F++K+ YR+ + + S      S S+     + R  W A    K KI AWR+  DI+PT  N+ KKGV    +C+FC    E+++H           
Subjt:  SKGRFSMKNVYRLVMELESKSNPSPSCSS-----VGRRGWKAPEIPKAKITAWRIVKDIIPTSYNIRKKGVIYNPLCLFCASKVETSVH-----------

Query:  -------NSSPSSIEEISRDIDMVWEDLLEPLPSAELSKKMENRMIHQP--WKPPPADCWKLNSDASISASGSGCDVGWVVRDSSSSLICGGALSIKDIW
                 +   ++    ++    +  +    +A  +       +  P  W  PP+   K N D +   +     VG V RD+    +   A S+ ++ 
Subjt:  -------NSSPSSIEEISRDIDMVWEDLLEPLPSAELSKKMENRMIHQP--WKPPPADCWKLNSDASISASGSGCDVGWVVRDSSSSLICGGALSIKDIW

Query:  SVNSLEALTIREGL
        S    E L  REG+
Subjt:  SVNSLEALTIREGL

M5XK32 Reverse transcriptase domain-containing protein (Fragment)2.2e-2024.84Show/hide
Query:  GPRIYIALFKSARSVSDKFCARNTSF-----PLYCGKGSLIPHLVNNDFKGRFVSNLKDVSGRWNRHLIKRIFHPIDAKDILSIPCGSPLAKDEIIWSLD
        G R  I   KS R   DK+  R  +F     PL   + + +  L+ N           + S +W+   +  +F P+D  D + IP       D I+W+ D
Subjt:  GPRIYIALFKSARSVSDKFCARNTSF-----PLYCGKGSLIPHLVNNDFKGRFVSNLKDVSGRWNRHLIKRIFHPIDAKDILSIPCGSPLAKDEIIWSLD

Query:  SKGRFSMKNVYRLVMELES-----KSNPSPSCSSVGRRGWKAPEIPKAKITAWRIVKDIIPTSYNIRKKGVIYNPLCLFCASKVETSVH-----------
          G F++K+ YR+ + + S      S+ +   S + R  W A    K KI AWR+  DI+PT  N+ KKGV    +C+FC    E+++H           
Subjt:  SKGRFSMKNVYRLVMELES-----KSNPSPSCSSVGRRGWKAPEIPKAKITAWRIVKDIIPTSYNIRKKGVIYNPLCLFCASKVETSVH-----------

Query:  -------NSSPSSIEEISRDIDMVWEDLLEPLPSAELSKKMENRMIHQP--WKPPPADCWKLNSDASISASGSGCDVGWVVRDSSSSLICGGALSIKDIW
                 +   ++    D+    +  +    +A  +       +  P  W  P +   K N D +   +     VG V RD+    +   A S+ ++ 
Subjt:  -------NSSPSSIEEISRDIDMVWEDLLEPLPSAELSKKMENRMIHQP--WKPPPADCWKLNSDASISASGSGCDVGWVVRDSSSSLICGGALSIKDIW

Query:  SVNSLEALTIREGL
        S    E L  REG+
Subjt:  SVNSLEALTIREGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCTCTCACGATCTGGGCCTCGTATATATATAGCTCTTTTCAAGAGCGCTCGATCAGTATCAGACAAGTTTTGCGCCAGAAACACTTCGTTTCCTCTTTACTGTGG
GAAAGGCAGTTTGATCCCTCACCTGGTTAACAACGATTTCAAAGGGAGGTTCGTGAGCAACCTCAAAGATGTCTCGGGCAGATGGAACAGGCACTTGATTAAGAGGATTT
TCCACCCGATAGATGCGAAAGATATCCTTAGCATTCCCTGTGGATCTCCCCTGGCTAAGGATGAGATTATTTGGAGTTTAGACTCCAAGGGGAGATTCTCCATGAAAAAT
GTCTATAGGCTTGTGATGGAGTTGGAATCTAAATCTAACCCATCACCCTCTTGCAGCAGCGTGGGGAGAAGAGGTTGGAAGGCCCCTGAAATTCCTAAAGCTAAGATTAC
TGCCTGGAGAATCGTCAAAGATATTATCCCAACTAGTTACAATATACGAAAAAAGGGAGTAATTTATAACCCTTTGTGTTTATTCTGTGCTAGCAAAGTTGAAACATCAG
TGCATAATTCGAGTCCCTCTTCGATCGAAGAGATCAGCAGAGACATTGACATGGTGTGGGAAGACTTACTTGAGCCCTTACCTTCTGCGGAGCTAAGCAAGAAGATGGAG
AACCGCATGATTCACCAACCGTGGAAGCCTCCGCCTGCGGATTGCTGGAAATTAAACTCTGACGCCTCAATCAGCGCTTCGGGATCGGGTTGCGATGTAGGCTGGGTGGT
GCGTGACTCCTCCAGTTCTTTGATCTGTGGAGGTGCCCTTTCGATCAAGGACATTTGGAGCGTGAATTCGCTTGAAGCTCTCACGATTAGGGAGGGGTTGGAAACTCTGA
AGGCCAAGAAAATCTTCCCTCCGAAATCCCTCTGTGTGGAATTGACATCTTCTAAACGAGGAAGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACCTCTCACGATCTGGGCCTCGTATATATATAGCTCTTTTCAAGAGCGCTCGATCAGTATCAGACAAGTTTTGCGCCAGAAACACTTCGTTTCCTCTTTACTGTGG
GAAAGGCAGTTTGATCCCTCACCTGGTTAACAACGATTTCAAAGGGAGGTTCGTGAGCAACCTCAAAGATGTCTCGGGCAGATGGAACAGGCACTTGATTAAGAGGATTT
TCCACCCGATAGATGCGAAAGATATCCTTAGCATTCCCTGTGGATCTCCCCTGGCTAAGGATGAGATTATTTGGAGTTTAGACTCCAAGGGGAGATTCTCCATGAAAAAT
GTCTATAGGCTTGTGATGGAGTTGGAATCTAAATCTAACCCATCACCCTCTTGCAGCAGCGTGGGGAGAAGAGGTTGGAAGGCCCCTGAAATTCCTAAAGCTAAGATTAC
TGCCTGGAGAATCGTCAAAGATATTATCCCAACTAGTTACAATATACGAAAAAAGGGAGTAATTTATAACCCTTTGTGTTTATTCTGTGCTAGCAAAGTTGAAACATCAG
TGCATAATTCGAGTCCCTCTTCGATCGAAGAGATCAGCAGAGACATTGACATGGTGTGGGAAGACTTACTTGAGCCCTTACCTTCTGCGGAGCTAAGCAAGAAGATGGAG
AACCGCATGATTCACCAACCGTGGAAGCCTCCGCCTGCGGATTGCTGGAAATTAAACTCTGACGCCTCAATCAGCGCTTCGGGATCGGGTTGCGATGTAGGCTGGGTGGT
GCGTGACTCCTCCAGTTCTTTGATCTGTGGAGGTGCCCTTTCGATCAAGGACATTTGGAGCGTGAATTCGCTTGAAGCTCTCACGATTAGGGAGGGGTTGGAAACTCTGA
AGGCCAAGAAAATCTTCCCTCCGAAATCCCTCTGTGTGGAATTGACATCTTCTAAACGAGGAAGAGGATGA
Protein sequenceShow/hide protein sequence
MDLSRSGPRIYIALFKSARSVSDKFCARNTSFPLYCGKGSLIPHLVNNDFKGRFVSNLKDVSGRWNRHLIKRIFHPIDAKDILSIPCGSPLAKDEIIWSLDSKGRFSMKN
VYRLVMELESKSNPSPSCSSVGRRGWKAPEIPKAKITAWRIVKDIIPTSYNIRKKGVIYNPLCLFCASKVETSVHNSSPSSIEEISRDIDMVWEDLLEPLPSAELSKKME
NRMIHQPWKPPPADCWKLNSDASISASGSGCDVGWVVRDSSSSLICGGALSIKDIWSVNSLEALTIREGLETLKAKKIFPPKSLCVELTSSKRGRG