CuGenDBv2

Gene ID	Spg014682
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ATPase family AAA domain-containing protein
Genome location	scaffold3:37406258..37407848
RNA-Seq Expression	Spg014682
Synteny	Spg014682
Gene Ontology terms	GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process) GO:0005634 - nucleus (cellular component) GO:0003682 - chromatin binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function) GO:0042393 - histone binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0033058.1 ATPase family AAA domain-containing protein [Cucumis melo var. makuwa]

4.0e-33

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Query:  DVVFKNIHGKFYQSNLALASPMYPKQTGLGDGPVSSPLRTSARPRRRPMSFGRQYVYYTHASSATFKTNKKRTPATRIAKMLRPKKQSMPTANAV
        +VVF++ HG+FYQSNLAL S MYPKQTGLGDGPVSSPLRTSARPR+RP+S+GR YVYY   SSATFK +K RTPA RIAK+LRPKKQSMPTANAV
Subjt:  DVVFKNIHGKFYQSNLALASPMYPKQTGLGDGPVSSPLRTSARPRRRPMSFGRQYVYYTHASSATFKTNKKRTPATRIAKMLRPKKQSMPTANAV

TYK03471.1 ATPase family AAA domain-containing protein [Cucumis melo var. makuwa]

4.0e-33

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Query:  DVVFKNIHGKFYQSNLALASPMYPKQTGLGDGPVSSPLRTSARPRRRPMSFGRQYVYYTHASSATFKTNKKRTPATRIAKMLRPKKQSMPTANAV
        +VVF++ HG+FYQSNLAL S MYPKQTGLGDGPVSSPLRTSARPR+RP+S+GR YVYY   SSATFK +K RTPA RIAK+LRPKKQSMPTANAV
Subjt:  DVVFKNIHGKFYQSNLALASPMYPKQTGLGDGPVSSPLRTSARPRRRPMSFGRQYVYYTHASSATFKTNKKRTPATRIAKMLRPKKQSMPTANAV

XP_023514115.1 ATPase family AAA domain-containing protein At1g05910 isoform X1 [Cucurbita pepo subsp. pepo]

9.5e-27

83.75

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Query:  MYPKQTGLGDGPVSSPLRTSARPRRRPMSFGRQYVYYTHASSATFKTNKKRTPATRIAKMLRPKKQSMPTANAVVRTIFY
        MYPKQTGLGDGPVSSPLRTSARPRRRP+S+GR YVYY    SA+FK NKKRTPATRIAKMLRPKKQS+PT NAVVRT  Y
Subjt:  MYPKQTGLGDGPVSSPLRTSARPRRRPMSFGRQYVYYTHASSATFKTNKKRTPATRIAKMLRPKKQSMPTANAVVRTIFY

XP_023514117.1 ATPase family AAA domain-containing protein At1g05910 isoform X2 [Cucurbita pepo subsp. pepo]

9.5e-27

83.75

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Query:  MYPKQTGLGDGPVSSPLRTSARPRRRPMSFGRQYVYYTHASSATFKTNKKRTPATRIAKMLRPKKQSMPTANAVVRTIFY
        MYPKQTGLGDGPVSSPLRTSARPRRRP+S+GR YVYY    SA+FK NKKRTPATRIAKMLRPKKQS+PT NAVVRT  Y
Subjt:  MYPKQTGLGDGPVSSPLRTSARPRRRPMSFGRQYVYYTHASSATFKTNKKRTPATRIAKMLRPKKQSMPTANAVVRTIFY

XP_023514118.1 ATPase family AAA domain-containing protein At1g05910 isoform X3 [Cucurbita pepo subsp. pepo]

9.5e-27

83.75

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Query:  MYPKQTGLGDGPVSSPLRTSARPRRRPMSFGRQYVYYTHASSATFKTNKKRTPATRIAKMLRPKKQSMPTANAVVRTIFY
        MYPKQTGLGDGPVSSPLRTSARPRRRP+S+GR YVYY    SA+FK NKKRTPATRIAKMLRPKKQS+PT NAVVRT  Y
Subjt:  MYPKQTGLGDGPVSSPLRTSARPRRRPMSFGRQYVYYTHASSATFKTNKKRTPATRIAKMLRPKKQSMPTANAVVRTIFY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KB13 Bromo domain-containing protein

1.1e-25

86.49

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Query:  MYPKQTGLGDGPVSSPLRTSARPRRRPMSFGRQYVYYTHASSATFKTNKKRTPATRIAKMLRPKKQSMPTANAV
        MYPKQTGLGDGPVSSPLRTSARPR+RP+S+GR YVYY   SSATFK NKKRTPA RIAK+LRPKKQSMPTANAV
Subjt:  MYPKQTGLGDGPVSSPLRTSARPRRRPMSFGRQYVYYTHASSATFKTNKKRTPATRIAKMLRPKKQSMPTANAV

A0A5A7SR80 ATPase family AAA domain-containing protein

1.9e-33

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Query:  DVVFKNIHGKFYQSNLALASPMYPKQTGLGDGPVSSPLRTSARPRRRPMSFGRQYVYYTHASSATFKTNKKRTPATRIAKMLRPKKQSMPTANAV
        +VVF++ HG+FYQSNLAL S MYPKQTGLGDGPVSSPLRTSARPR+RP+S+GR YVYY   SSATFK +K RTPA RIAK+LRPKKQSMPTANAV
Subjt:  DVVFKNIHGKFYQSNLALASPMYPKQTGLGDGPVSSPLRTSARPRRRPMSFGRQYVYYTHASSATFKTNKKRTPATRIAKMLRPKKQSMPTANAV

A0A5D3BUQ9 ATPase family AAA domain-containing protein

1.9e-33

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Query:  DVVFKNIHGKFYQSNLALASPMYPKQTGLGDGPVSSPLRTSARPRRRPMSFGRQYVYYTHASSATFKTNKKRTPATRIAKMLRPKKQSMPTANAV
        +VVF++ HG+FYQSNLAL S MYPKQTGLGDGPVSSPLRTSARPR+RP+S+GR YVYY   SSATFK +K RTPA RIAK+LRPKKQSMPTANAV
Subjt:  DVVFKNIHGKFYQSNLALASPMYPKQTGLGDGPVSSPLRTSARPRRRPMSFGRQYVYYTHASSATFKTNKKRTPATRIAKMLRPKKQSMPTANAV

A0A6J1DAI8 ATPase family AAA domain-containing protein At1g05910

1.5e-25

86.49

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Query:  MYPKQTGLGDGPVSSPLRTSARPRRRPMSFGRQYVYYTHASSATFKTNKKRTPATRIAKMLRPKKQSMPTANAV
        MYPKQTGLGDGPVSSPLRTSARPRRRP+S+GR YVYY   SS TFK NKKRTPATRIAKMLRPKKQS+PTAN V
Subjt:  MYPKQTGLGDGPVSSPLRTSARPRRRPMSFGRQYVYYTHASSATFKTNKKRTPATRIAKMLRPKKQSMPTANAV

A0A6J1H8J9 ATPase family AAA domain-containing protein At1g05910 isoform X1

4.3e-25

85.14

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Query:  MYPKQTGLGDGPVSSPLRTSARPRRRPMSFGRQYVYYTHASSATFKTNKKRTPATRIAKMLRPKKQSMPTANAV
        MYPKQTGLGDGPVSSPLRTSARPRRRP+S+GR YVYY    SA+FK NKKRTPATRIAKMLRPKKQS+PT NAV
Subjt:  MYPKQTGLGDGPVSSPLRTSARPRRRPMSFGRQYVYYTHASSATFKTNKKRTPATRIAKMLRPKKQSMPTANAV

SwissProt top hits

e value

%identity

Alignment

F4IAE9 ATPase family AAA domain-containing protein At1g05910

5.1e-07

42.67

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Query:  MYPKQTGLGDGPVSSPLRTSARPRRRPMSFGRQYVYYTHASSA--TFKTNKKRTPATRIAKMLRPKKQSMPTANA
        M+PK++  GDG V+ P+RTS R RRRP   GR Y+YY+  +      +  K RT A++IAKML    +    +NA
Subjt:  MYPKQTGLGDGPVSSPLRTSARPRRRPMSFGRQYVYYTHASSA--TFKTNKKRTPATRIAKMLRPKKQSMPTANA

Arabidopsis top hits

e value

%identity

Alignment

AT1G05910.1 cell division cycle protein 48-related / CDC48-related

3.6e-08

42.67

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Query:  MYPKQTGLGDGPVSSPLRTSARPRRRPMSFGRQYVYYTHASSA--TFKTNKKRTPATRIAKMLRPKKQSMPTANA
        M+PK++  GDG V+ P+RTS R RRRP   GR Y+YY+  +      +  K RT A++IAKML    +    +NA
Subjt:  MYPKQTGLGDGPVSSPLRTSARPRRRPMSFGRQYVYYTHASSA--TFKTNKKRTPATRIAKMLRPKKQSMPTANA

Sequences

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CDS sequence

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ATGGGTAATTGTCATGATGTTGTCTTCAAAAACATTCATGGGAAATTCTATCAATCCAATCTAGCTCTTGCATCGCCCATGTATCCAAAGCAAACCGGTTTAGGGGATGG
ACCAGTCTCCAGCCCACTACGCACAAGTGCTCGACCAAGGAGGAGGCCAATGTCATTTGGTCGTCAATATGTATATTATACACATGCTTCTTCTGCAACCTTCAAAACCA
ACAAGAAAAGAACCCCAGCTACTAGAATTGCCAAGATGCTCCGTCCAAAGAAGCAATCCATGCCAACTGCTAATGCTGTTGTGAGAACTATATTCTATATCAGTATATCT
TATACCAATTCAAAAGGTCTTATTGGCATTGATTATCGCTAG

mRNA sequence

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Protein sequence

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MGNCHDVVFKNIHGKFYQSNLALASPMYPKQTGLGDGPVSSPLRTSARPRRRPMSFGRQYVYYTHASSATFKTNKKRTPATRIAKMLRPKKQSMPTANAVVRTIFYISIS
YTNSKGLIGIDYR

Spg014682 (gene) of Sponge gourd (cylindrica) v1 genome