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Spg014728 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg014728
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionBiotin synthase
Genome locationscaffold3:37231275..37233323
RNA-Seq ExpressionSpg014728
SyntenySpg014728
Gene Ontology termsGO:0009102 - biotin biosynthetic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0004076 - biotin synthase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR002684 - Biotin synthase/Biotin biosynthesis bifunctional protein BioAB
IPR010722 - Biotin and thiamin synthesis-associated domain
IPR013785 - Aldolase-type TIM barrel


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033098.1 biotin synthase [Cucumis melo var. makuwa]5.8e-4095.7Show/hide
Query:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAAS
        M+RMIATARITMPKAMVRLSAGRVKFS+PEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFT+D EKAPEEESLQEAAS
Subjt:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAAS

XP_004140874.1 biotin synthase, mitochondrial [Cucumis sativus]7.5e-4093.68Show/hide
Query:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAASNS
        M+RMIATARITMPKAMVRLSAGRVKFS+PEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFT+D EKAPEEESLQEAA +S
Subjt:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAASNS

XP_008445703.1 PREDICTED: biotin synthase [Cucumis melo]5.8e-4095.7Show/hide
Query:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAAS
        M+RMIATARITMPKAMVRLSAGRVKFS+PEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFT+D EKAPEEESLQEAAS
Subjt:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAAS

XP_022150359.1 biotin synthase [Momordica charantia]8.9e-4195.79Show/hide
Query:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAASNS
        M+RMIATARITMPKAMVRLSAGRVKFS+PEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSF+D VEKAPEEESLQEAASNS
Subjt:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAASNS

XP_038886510.1 biotin synthase, mitochondrial [Benincasa hispida]3.4e-4093.68Show/hide
Query:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAASNS
        M+RMIATARITMPKAMVRLSAGRVKFS+PEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFT+DV+KAPEEESLQE AS+S
Subjt:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAASNS

TrEMBL top hitse value%identityAlignment
A0A0A0KCA2 Biotin synthase3.6e-4093.68Show/hide
Query:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAASNS
        M+RMIATARITMPKAMVRLSAGRVKFS+PEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFT+D EKAPEEESLQEAA +S
Subjt:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAASNS

A0A1S3BDC5 Biotin synthase2.8e-4095.7Show/hide
Query:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAAS
        M+RMIATARITMPKAMVRLSAGRVKFS+PEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFT+D EKAPEEESLQEAAS
Subjt:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAAS

A0A5D3D025 Biotin synthase2.8e-4095.7Show/hide
Query:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAAS
        M+RMIATARITMPKAMVRLSAGRVKFS+PEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFT+D EKAPEEESLQEAAS
Subjt:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAAS

A0A6J1D9U9 Biotin synthase4.3e-4195.79Show/hide
Query:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAASNS
        M+RMIATARITMPKAMVRLSAGRVKFS+PEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSF+D VEKAPEEESLQEAASNS
Subjt:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAASNS

A0A6J1EPY7 Biotin synthase8.1e-4094.68Show/hide
Query:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAASN
        M+RMIATARITMPKAMVRLSAGRVKFS+PEQALCFLAGANSIFTGEKLLTTPNNDFDADQ MFKMLGLIPKAPSFTD  EKAPEEESLQEAASN
Subjt:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAASN

SwissProt top hitse value%identityAlignment
A0M7A9 Biotin synthase6.5e-1854.84Show/hide
Query:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAAS
        M+RM+AT RI MP+  VRLSAGR + S   QA+CF AGANSIF G+KLLTTPN D   D  MFKMLGL P         +KA E++S  E+ +
Subjt:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAAS

A6GW77 Biotin synthase2.2e-1861.64Show/hide
Query:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAP
        M+RM+AT RI MP+  VRLSAGR+  +   QA+CF AGANSIF G+KLLTTPN D + D  MF+MLGL P+ P
Subjt:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAP

P54967 Biotin synthase, mitochondrial2.7e-3277.89Show/hide
Query:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAASNS
        M+RMI TARI MPKAMVRLSAGRV+FSM EQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFK LGLIPK PSF++D     E E+ ++ AS S
Subjt:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAASNS

Q11S94 Biotin synthase3.7e-2163.95Show/hide
Query:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEE
        MVRMIATARI MPKAMVRLSAGRV+ +  EQALCFLAGANSIF G+KLLTTPN + +AD+ MF++L L P+      D  K   E+
Subjt:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEE

Q9Z6L5 Biotin synthase8.4e-1861.33Show/hide
Query:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSF
        ++R IATAR+  P++MVRL+AGR   ++ +Q LCFLAGANSIF G+KLLT  NND D D  M K+LGLIP+ PSF
Subjt:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSF

Arabidopsis top hitse value%identityAlignment
AT2G43360.1 Radical SAM superfamily protein1.9e-3377.89Show/hide
Query:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAASNS
        M+RMI TARI MPKAMVRLSAGRV+FSM EQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFK LGLIPK PSF++D     E E+ ++ AS S
Subjt:  MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAASNS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCGAATGATCGCTACAGCACGGATCACCATGCCGAAAGCAATGGTCAGGTTGTCAGCAGGTAGAGTGAAGTTCTCCATGCCCGAGCAAGCGTTATGCTTCCTTGC
AGGAGCGAATTCTATCTTCACCGGAGAGAAACTGCTAACGACGCCAAATAATGATTTTGATGCTGATCAACTCATGTTCAAGATGCTAGGTTTGATTCCAAAAGCTCCCA
GTTTCACTGATGATGTTGAGAAAGCCCCTGAAGAAGAGTCATTACAAGAAGCTGCTTCCAATTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCGAATGATCGCTACAGCACGGATCACCATGCCGAAAGCAATGGTCAGGTTGTCAGCAGGTAGAGTGAAGTTCTCCATGCCCGAGCAAGCGTTATGCTTCCTTGC
AGGAGCGAATTCTATCTTCACCGGAGAGAAACTGCTAACGACGCCAAATAATGATTTTGATGCTGATCAACTCATGTTCAAGATGCTAGGTTTGATTCCAAAAGCTCCCA
GTTTCACTGATGATGTTGAGAAAGCCCCTGAAGAAGAGTCATTACAAGAAGCTGCTTCCAATTCATAA
Protein sequenceShow/hide protein sequence
MVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAASNS