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Spg014763 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg014763
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold3:29770321..29772648
RNA-Seq ExpressionSpg014763
SyntenySpg014763
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040420.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]1.5e-1379.63Show/hide
Query:  TLRPRGNRSSLQTGELDKTVEIEPPVPDTLPTSAESSRSSSSTWLELYIESVHI
        T RPRGNR SLQTG+LDKTVEIE P+PDTLPT AES  S+SSTWLELY ESVH+
Subjt:  TLRPRGNRSSLQTGELDKTVEIEPPVPDTLPTSAESSRSSSSTWLELYIESVHI

KAA0052218.1 uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa]5.2e-1477.78Show/hide
Query:  TLRPRGNRSSLQTGELDKTVEIEPPVPDTLPTSAESSRSSSSTWLELYIESVHI
        ++ PRGNR +L TG+LDKTVEIE PVPDTLPTSAESS+S+SSTWLELY ESVH+
Subjt:  TLRPRGNRSSLQTGELDKTVEIEPPVPDTLPTSAESSRSSSSTWLELYIESVHI

KAA0062263.1 hypothetical protein E6C27_scaffold679G00320 [Cucumis melo var. makuwa]5.8e-1378.43Show/hide
Query:  PRGNRSSLQTGELDKTVEIEPPVPDTLPTSAESSRSSSSTWLELYIESVHI
        PRGNR SLQ G+L+KTVEIE P+PDTLPTS+ESS+S+SSTWLELY ESVH+
Subjt:  PRGNRSSLQTGELDKTVEIEPPVPDTLPTSAESSRSSSSTWLELYIESVHI

KAA0066795.1 uncharacterized protein E6C27_scaffold271G001440 [Cucumis melo var. makuwa]2.9e-1264.71Show/hide
Query:  LQNLVVGGREEGVSTLRPRGNRSSLQTGELDKTVEIEPPVPDTLPTSAESSRSSSSTWLELYIESVHI
        L  L V   ++ +  + PRGNR SLQT ELDKT+E+  PVPDTLPTSAESS S+SSTWLELY ESVH+
Subjt:  LQNLVVGGREEGVSTLRPRGNRSSLQTGELDKTVEIEPPVPDTLPTSAESSRSSSSTWLELYIESVHI

TYJ96965.1 uncharacterized protein E5676_scaffold506G00070 [Cucumis melo var. makuwa]1.2e-1384.31Show/hide
Query:  PRGNRSSLQTGELDKTVEIEPPVPDTLPTSAESSRSSSSTWLELYIESVHI
        PRGNR S QTG+LDKTVEIE PVPDTLPTSAESS S+SSTWLELY ESVH+
Subjt:  PRGNRSSLQTGELDKTVEIEPPVPDTLPTSAESSRSSSSTWLELYIESVHI

TrEMBL top hitse value%identityAlignment
A0A5A7TAS6 NBS-LRR type resistance protein7.3e-1479.63Show/hide
Query:  TLRPRGNRSSLQTGELDKTVEIEPPVPDTLPTSAESSRSSSSTWLELYIESVHI
        T RPRGNR SLQTG+LDKTVEIE P+PDTLPT AES  S+SSTWLELY ESVH+
Subjt:  TLRPRGNRSSLQTGELDKTVEIEPPVPDTLPTSAESSRSSSSTWLELYIESVHI

A0A5A7UAH6 CCHC-type domain-containing protein2.5e-1477.78Show/hide
Query:  TLRPRGNRSSLQTGELDKTVEIEPPVPDTLPTSAESSRSSSSTWLELYIESVHI
        ++ PRGNR +L TG+LDKTVEIE PVPDTLPTSAESS+S+SSTWLELY ESVH+
Subjt:  TLRPRGNRSSLQTGELDKTVEIEPPVPDTLPTSAESSRSSSSTWLELYIESVHI

A0A5A7V2F2 Uncharacterized protein2.8e-1378.43Show/hide
Query:  PRGNRSSLQTGELDKTVEIEPPVPDTLPTSAESSRSSSSTWLELYIESVHI
        PRGNR SLQ G+L+KTVEIE P+PDTLPTS+ESS+S+SSTWLELY ESVH+
Subjt:  PRGNRSSLQTGELDKTVEIEPPVPDTLPTSAESSRSSSSTWLELYIESVHI

A0A5D3BET3 Uncharacterized protein5.6e-1484.31Show/hide
Query:  PRGNRSSLQTGELDKTVEIEPPVPDTLPTSAESSRSSSSTWLELYIESVHI
        PRGNR S QTG+LDKTVEIE PVPDTLPTSAESS S+SSTWLELY ESVH+
Subjt:  PRGNRSSLQTGELDKTVEIEPPVPDTLPTSAESSRSSSSTWLELYIESVHI

A0A5D3DWP3 Uncharacterized protein1.4e-1264.71Show/hide
Query:  LQNLVVGGREEGVSTLRPRGNRSSLQTGELDKTVEIEPPVPDTLPTSAESSRSSSSTWLELYIESVHI
        L  L V   ++ +  + PRGNR SLQT ELDKT+E+  PVPDTLPTSAESS S+SSTWLELY ESVH+
Subjt:  LQNLVVGGREEGVSTLRPRGNRSSLQTGELDKTVEIEPPVPDTLPTSAESSRSSSSTWLELYIESVHI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCCTCCTCATAAGTCTCCTCTGCATCACCATGGTCCACGCAGTCGTCATAACCTGCAAAATCTGGTAGTTGGGGGGAGAGAGGAGGGGGTCAGTACACTAAGGCC
AAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACAGTAGAGATCGAGCCCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCT
CCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTCATATTGTAAATGTTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCCTCCTCATAAGTCTCCTCTGCATCACCATGGTCCACGCAGTCGTCATAACCTGCAAAATCTGGTAGTTGGGGGGAGAGAGGAGGGGGTCAGTACACTAAGGCC
AAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACAGTAGAGATCGAGCCCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCT
CCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTCATATTGTAAATGTTTTGTAA
Protein sequenceShow/hide protein sequence
MVPPHKSPLHHHGPRSRHNLQNLVVGGREEGVSTLRPRGNRSSLQTGELDKTVEIEPPVPDTLPTSAESSRSSSSTWLELYIESVHIVNVL