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Spg014771 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg014771
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein TOPLESS-like
Genome locationscaffold3:49808296..49816529
RNA-Seq ExpressionSpg014771
SyntenySpg014771
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0048731 - system development (biological process)
InterPro domainsIPR027728 - Topless family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER44102.1 transducin family protein / WD-40 repeat family protein [Striga asiatica]3.2e-1643.33Show/hide
Query:  VNLPVNVLPVSFADHGH---------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVGCLSCLRVGLECLGASYLAHIPVVTPIGAVMRTPNQGSSPMCM
        VNLPVNVLPVSF  H H         DLPK V RT NQGSSPM  D HP+QQTLLLVG  +   +GL  +G+              V+R         C 
Subjt:  VNLPVNVLPVSFADHGH---------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVGCLSCLRVGLECLGASYLAHIPVVTPIGAVMRTPNQGSSPMCM

Query:  DFHPVQQTLLLVLCLSCLRV----GLECLGASYLAHI----------PVVTPIGISMLIYTNSGSAILALASNAFHLLWK
           P+Q +L     +S  RV         G +Y  H+           +   + IS LIYTNSGSAILALASNA HLLWK
Subjt:  DFHPVQQTLLLVLCLSCLRV----GLECLGASYLAHI----------PVVTPIGISMLIYTNSGSAILALASNAFHLLWK

KAG7036524.1 Protein TOPLESS [Cucurbita argyrosperma subsp. argyrosperma]6.2e-1275.44Show/hide
Query:  VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG
        VNLPVNVLPVSFA HGH        DLPK VMRT NQGSSPM  D HPVQQTLLLVG
Subjt:  VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG

XP_019091004.1 PREDICTED: protein TOPLESS [Camelina sativa]1.2e-1535.75Show/hide
Query:  VNLPVNVLPVSFADHGH-----------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVGCL--------------------------------SCLRVG
        VNL VN+LP+SF   GH           DLPK V RT +QGSSPM  D HP++QTLLL G                                    +  G
Subjt:  VNLPVNVLPVSFADHGH-----------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVGCL--------------------------------SCLRVG

Query:  LECLGASYLA-----------------------HIPVVT-PIG----VNLPVNVLPVSFADHGH-----------DLPKAVMRTPNQGSSPMCTDIHPVQ
           LG   ++                       H+   T P+G    VNL VN+LP+SF   GH           DLPK V RT +QGSSPM  D HP++
Subjt:  LECLGASYLA-----------------------HIPVVT-PIG----VNLPVNVLPVSFADHGH-----------DLPKAVMRTPNQGSSPMCTDIHPVQ

Query:  QTLLLVG
        QTLLLVG
Subjt:  QTLLLVG

XP_022997768.1 protein TOPLESS-like [Cucurbita maxima]6.2e-1275.44Show/hide
Query:  VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG
        VNLPVNVLPVSFA HGH        DLPK VMRT NQGSSPM  D HPVQQTLLLVG
Subjt:  VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG

XP_023523502.1 protein TOPLESS [Cucurbita pepo subsp. pepo]6.2e-1275.44Show/hide
Query:  VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG
        VNLPVNVLPVSFA HGH        DLPK VMRT NQGSSPM  D HPVQQTLLLVG
Subjt:  VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG

TrEMBL top hitse value%identityAlignment
A0A5A7QGS6 Transducin family protein / WD-40 repeat family protein1.5e-1643.33Show/hide
Query:  VNLPVNVLPVSFADHGH---------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVGCLSCLRVGLECLGASYLAHIPVVTPIGAVMRTPNQGSSPMCM
        VNLPVNVLPVSF  H H         DLPK V RT NQGSSPM  D HP+QQTLLLVG  +   +GL  +G+              V+R         C 
Subjt:  VNLPVNVLPVSFADHGH---------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVGCLSCLRVGLECLGASYLAHIPVVTPIGAVMRTPNQGSSPMCM

Query:  DFHPVQQTLLLVLCLSCLRV----GLECLGASYLAHI----------PVVTPIGISMLIYTNSGSAILALASNAFHLLWK
           P+Q +L     +S  RV         G +Y  H+           +   + IS LIYTNSGSAILALASNA HLLWK
Subjt:  DFHPVQQTLLLVLCLSCLRV----GLECLGASYLAHI----------PVVTPIGISMLIYTNSGSAILALASNAFHLLWK

A0A6J1DKI7 protein TOPLESS8.2e-0292.31Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LIYTNSGSAILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

A0A6J1DKI7 protein TOPLESS8.8e-1273.68Show/hide
Query:  VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG
        VNLPVNVLPVSFA HGH        DLPK V+RT NQGSSPM  D HPVQQTLLLVG
Subjt:  VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG

A0A6J1GAU7 protein TOPLESS-like8.2e-0292.31Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LIYTNSGSAILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

A0A6J1GAU7 protein TOPLESS-like5.1e-1273.68Show/hide
Query:  VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG
        VNLPVNVLPVSFA HGH        DLPK V+RT NQGSSPM  D HPVQQTLLLVG
Subjt:  VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG

A0A6J1IYH0 protein TOPLESS8.2e-0292.31Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LIYTNSGSAILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

A0A6J1KEV5 protein TOPLESS-like3.0e-1275.44Show/hide
Query:  VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG
        VNLPVNVLPVSFA HGH        DLPK VMRT NQGSSPM  D HPVQQTLLLVG
Subjt:  VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG

A0A6J1KEV5 protein TOPLESS-like8.2e-0292.31Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LIYTNSGSAILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

A0A6J1KEV5 protein TOPLESS-like3.0e-1275.44Show/hide
Query:  VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG
        VNLPVNVLPVSFA HGH        DLPK VMRT NQGSSPM  D HPVQQTLLLVG
Subjt:  VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG

SwissProt top hitse value%identityAlignment
Q0J7U6 Protein TOPLESS-RELATED PROTEIN 21.3e-0454.17Show/hide
Query:  VSFADHGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG
        VSF+   H        DLPK V+R  NQGS+ M  D HPVQQT+LLVG
Subjt:  VSFADHGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG

Q0WV90 Topless-related protein 11.9e-0855.93Show/hide
Query:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG
        V+L VN+LP++F    HGH        DLPK V RT +QGSSPM  D HP++QTLLLVG
Subjt:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG

Q0WV90 Topless-related protein 11.4e-0384.62Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LI+TNSG+AILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

Q10NY2 Protein TPR31.3e-0756.67Show/hide
Query:  PVVTPIGVNLPVNVLPVSF-ADHGH---DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG
        PV     VNLPVN+LPV++   H +   D  K V RT +QGS+PM  D HPVQQTLLLVG
Subjt:  PVVTPIGVNLPVNVLPVSF-ADHGH---DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG

Q10NY2 Protein TPR31.4e-0388.46Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LIYTNSG AILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

Q27GK7 Topless-related protein 44.8e-0753.57Show/hide
Query:  NLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG
        NLPVNVLPV++    H        DLPK V R  +QGS+    D HPVQQT+LLVG
Subjt:  NLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG

Q27GK7 Topless-related protein 43.6e-0268.97Show/hide
Query:  PIGISMLIYTNSGSAILALASNAFHLLWK
        P  +  LIYTNSG AILALA NA H LWK
Subjt:  PIGISMLIYTNSGSAILALASNAFHLLWK

Q94AI7 Protein TOPLESS1.3e-0959.32Show/hide
Query:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG
        VNL VN+LP+SF+   HGH        DLPK V RT +QGSSPM  D HP++QTLLLVG
Subjt:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG

Q94AI7 Protein TOPLESS1.4e-0384.62Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LI+TNSG+AILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

Arabidopsis top hitse value%identityAlignment
AT1G15750.1 Transducin family protein / WD-40 repeat family protein9.6e-1159.32Show/hide
Query:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG
        VNL VN+LP+SF+   HGH        DLPK V RT +QGSSPM  D HP++QTLLLVG
Subjt:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG

AT1G15750.1 Transducin family protein / WD-40 repeat family protein1.0e-0484.62Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LI+TNSG+AILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

AT1G15750.2 Transducin family protein / WD-40 repeat family protein9.6e-1159.32Show/hide
Query:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG
        VNL VN+LP+SF+   HGH        DLPK V RT +QGSSPM  D HP++QTLLLVG
Subjt:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG

AT1G15750.2 Transducin family protein / WD-40 repeat family protein1.0e-0484.62Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LI+TNSG+AILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

AT1G15750.3 Transducin family protein / WD-40 repeat family protein9.6e-1159.32Show/hide
Query:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG
        VNL VN+LP+SF+   HGH        DLPK V RT +QGSSPM  D HP++QTLLLVG
Subjt:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG

AT1G15750.3 Transducin family protein / WD-40 repeat family protein1.0e-0484.62Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LI+TNSG+AILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

AT1G15750.4 Transducin family protein / WD-40 repeat family protein9.6e-1159.32Show/hide
Query:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG
        VNL VN+LP+SF+   HGH        DLPK V RT +QGSSPM  D HP++QTLLLVG
Subjt:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG

AT1G15750.4 Transducin family protein / WD-40 repeat family protein1.0e-0484.62Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LI+TNSG+AILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

AT1G80490.1 TOPLESS-related 11.4e-0955.93Show/hide
Query:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG
        V+L VN+LP++F    HGH        DLPK V RT +QGSSPM  D HP++QTLLLVG
Subjt:  VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVG

AT1G80490.1 TOPLESS-related 11.0e-0484.62Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LI+TNSG+AILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGATATAGCGAGTGGTGGTGATGTGCTAGATAAAACACCCAGTGAAGTTAGAGAGATAATTTCGAGCTTGGCAGTGTATGTTGGACTCATCGTATGGCGGGGACG
AAAGATGGAAATAGTTGATAAACTAGCTTTGGTTGATTCTATGTCAATTTCTATTTCCCCTGAGCTTACTAGTCCTGAATTGCATGAGTTAGATTTTGTAATTCCAATAG
TTGACCAATTTGTTGCTCAATATAAAGGAGCTGATAAAAAAGAAGATAAAGAAGAAGGATGTAATGAAAATCAAAGAGATCGATTTCGATTGGCGGTAAATCTACCGGTT
AATGTTCTGCCCGTATCATTTGCTGATCATGGTCATGATTTGCCAAAGGCTGTTATGCGAACACCGAATCAAGGGTCATCTCCAATGTGCACGGATATTCATCCGGTCCA
ACAAACTCTGCTATTGGTTGGGTGTCTTTCTTGCTTGAGAGTAGGACTTGAATGCCTAGGAGCGAGTTACTTAGCTCATATTCCTGTTGTCACCCCGATAGGTGTAAATC
TACCGGTTAATGTTCTGCCCGTATCATTTGCTGATCATGGTCATGATTTGCCAAAGGCTGTTATGCGAACACCGAATCAAGGGTCATCTCCAATGTGCACGGATATTCAT
CCGGTCCAACAAACTCTGCTATTGGTTGGGTGTCTTTCTTGCTTGAGAGTAGGACTTGAATGCCTAGGAGCGAGTTACTTAGCTCATATTCCTGTTGTCACCCCGATAGG
TGCTGTTATGCGAACACCGAATCAAGGGTCATCTCCAATGTGCATGGATTTTCATCCGGTCCAACAAACTCTGCTATTGGTTTTGTGTCTTTCTTGCTTGAGAGTAGGAC
TTGAATGCCTAGGAGCGAGTTACTTAGCTCATATTCCTGTTGTCACCCCGATAGGTATATCTATGTTGATCTACACAAATTCTGGAAGTGCAATCTTGGCATTGGCATCA
AATGCATTTCACCTGCTATGGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGATATAGCGAGTGGTGGTGATGTGCTAGATAAAACACCCAGTGAAGTTAGAGAGATAATTTCGAGCTTGGCAGTGTATGTTGGACTCATCGTATGGCGGGGACG
AAAGATGGAAATAGTTGATAAACTAGCTTTGGTTGATTCTATGTCAATTTCTATTTCCCCTGAGCTTACTAGTCCTGAATTGCATGAGTTAGATTTTGTAATTCCAATAG
TTGACCAATTTGTTGCTCAATATAAAGGAGCTGATAAAAAAGAAGATAAAGAAGAAGGATGTAATGAAAATCAAAGAGATCGATTTCGATTGGCGGTAAATCTACCGGTT
AATGTTCTGCCCGTATCATTTGCTGATCATGGTCATGATTTGCCAAAGGCTGTTATGCGAACACCGAATCAAGGGTCATCTCCAATGTGCACGGATATTCATCCGGTCCA
ACAAACTCTGCTATTGGTTGGGTGTCTTTCTTGCTTGAGAGTAGGACTTGAATGCCTAGGAGCGAGTTACTTAGCTCATATTCCTGTTGTCACCCCGATAGGTGTAAATC
TACCGGTTAATGTTCTGCCCGTATCATTTGCTGATCATGGTCATGATTTGCCAAAGGCTGTTATGCGAACACCGAATCAAGGGTCATCTCCAATGTGCACGGATATTCAT
CCGGTCCAACAAACTCTGCTATTGGTTGGGTGTCTTTCTTGCTTGAGAGTAGGACTTGAATGCCTAGGAGCGAGTTACTTAGCTCATATTCCTGTTGTCACCCCGATAGG
TGCTGTTATGCGAACACCGAATCAAGGGTCATCTCCAATGTGCATGGATTTTCATCCGGTCCAACAAACTCTGCTATTGGTTTTGTGTCTTTCTTGCTTGAGAGTAGGAC
TTGAATGCCTAGGAGCGAGTTACTTAGCTCATATTCCTGTTGTCACCCCGATAGGTATATCTATGTTGATCTACACAAATTCTGGAAGTGCAATCTTGGCATTGGCATCA
AATGCATTTCACCTGCTATGGAAATAG
Protein sequenceShow/hide protein sequence
MLDIASGGDVLDKTPSEVREIISSLAVYVGLIVWRGRKMEIVDKLALVDSMSISISPELTSPELHELDFVIPIVDQFVAQYKGADKKEDKEEGCNENQRDRFRLAVNLPV
NVLPVSFADHGHDLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVGCLSCLRVGLECLGASYLAHIPVVTPIGVNLPVNVLPVSFADHGHDLPKAVMRTPNQGSSPMCTDIH
PVQQTLLLVGCLSCLRVGLECLGASYLAHIPVVTPIGAVMRTPNQGSSPMCMDFHPVQQTLLLVLCLSCLRVGLECLGASYLAHIPVVTPIGISMLIYTNSGSAILALAS
NAFHLLWK