CuGenDBv2

Gene ID	Spg014788
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Biotin synthase
Genome location	scaffold3:37242378..37245249
RNA-Seq Expression	Spg014788
Synteny	Spg014788
Gene Ontology terms	GO:0009102 - biotin biosynthetic process (biological process) GO:0004076 - biotin synthase activity (molecular function) GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004140874.1 biotin synthase, mitochondrial [Cucumis sativus]

9.7e-27

63.06

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Query:  MLFAGSFFRSQLKPSHICRHSPGFSSLFSSLSASSAASIEADRVLRDGPRNNWTRQEIRDVYDSPVLDLLFHGVSASLSPISF----QCGTKTSHTALVP
        MLFA SFFRS LKPS ICRHSP FSSLFSSLSASSAAS+EA+R+LRDGPRN+WTRQ+IRD+YDSP+LDLLFHG        +F    QC   +  T    
Subjt:  MLFAGSFFRSQLKPSHICRHSPGFSSLFSSLSASSAASIEADRVLRDGPRNNWTRQEIRDVYDSPVLDLLFHGVSASLSPISF----QCGTKTSHTALVP

Query:  NNCP-SPESRR
         +C   P+S R
Subjt:  NNCP-SPESRR

XP_022929844.1 biotin synthase, mitochondrial [Cucurbita moschata]

1.3e-26

65.77

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Query:  MLFAGSFFRSQLKPSHICRHSPGFSSLFSSLSASSAASIEADRVLRDGPRNNWTRQEIRDVYDSPVLDLLFHGVSASLSPISF----QCGTKTSHTALVP
        MLFA SF RS LKPS I RHSP FSSLFSSLSASSAASIEADR+LRDGPRNNWTRQEIRD+YDSPVLDLLFHG        +F    QC   +  T    
Subjt:  MLFAGSFFRSQLKPSHICRHSPGFSSLFSSLSASSAASIEADRVLRDGPRNNWTRQEIRDVYDSPVLDLLFHGVSASLSPISF----QCGTKTSHTALVP

Query:  NNCP-SPESRR
         +C   P+S R
Subjt:  NNCP-SPESRR

XP_022992285.1 biotin synthase, mitochondrial [Cucurbita maxima]

1.3e-26

65.77

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Query:  MLFAGSFFRSQLKPSHICRHSPGFSSLFSSLSASSAASIEADRVLRDGPRNNWTRQEIRDVYDSPVLDLLFHGVSASLSPISF----QCGTKTSHTALVP
        MLFA SF RS LKPS I RHSP FSSLFSSLSASSAASIEADR+LRDGPRNNWTRQEIRD+YDSPVLDLLFHG        +F    QC   +  T    
Subjt:  MLFAGSFFRSQLKPSHICRHSPGFSSLFSSLSASSAASIEADRVLRDGPRNNWTRQEIRDVYDSPVLDLLFHGVSASLSPISF----QCGTKTSHTALVP

Query:  NNCP-SPESRR
         +C   P+S R
Subjt:  NNCP-SPESRR

XP_023549140.1 biotin synthase, mitochondrial [Cucurbita pepo subsp. pepo]

1.3e-26

65.77

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Query:  MLFAGSFFRSQLKPSHICRHSPGFSSLFSSLSASSAASIEADRVLRDGPRNNWTRQEIRDVYDSPVLDLLFHGVSASLSPISF----QCGTKTSHTALVP
        MLFA SF RS LKPS I RHSP FSSLFSSLSASSAASIEADR+LRDGPRNNWTRQEIRD+YDSPVLDLLFHG        +F    QC   +  T    
Subjt:  MLFAGSFFRSQLKPSHICRHSPGFSSLFSSLSASSAASIEADRVLRDGPRNNWTRQEIRDVYDSPVLDLLFHGVSASLSPISF----QCGTKTSHTALVP

Query:  NNCP-SPESRR
         +C   P+S R
Subjt:  NNCP-SPESRR

XP_038886510.1 biotin synthase, mitochondrial [Benincasa hispida]

1.9e-27

63.96

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Query:  MLFAGSFFRSQLKPSHICRHSPGFSSLFSSLSASSAASIEADRVLRDGPRNNWTRQEIRDVYDSPVLDLLFHGVSASLSPISF----QCGTKTSHTALVP
        MLFA SFFRSQLK S +CRHSPGFSSLFSSLSASSAASIEA+R+LRDGPRN+WTRQ+IRD+YDSP+LDLLFHG        +F    QC   +  T    
Subjt:  MLFAGSFFRSQLKPSHICRHSPGFSSLFSSLSASSAASIEADRVLRDGPRNNWTRQEIRDVYDSPVLDLLFHGVSASLSPISF----QCGTKTSHTALVP

Query:  NNCP-SPESRR
         +C   P+S R
Subjt:  NNCP-SPESRR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KCA2 Biotin synthase

4.7e-27

63.06

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Query:  MLFAGSFFRSQLKPSHICRHSPGFSSLFSSLSASSAASIEADRVLRDGPRNNWTRQEIRDVYDSPVLDLLFHGVSASLSPISF----QCGTKTSHTALVP
        MLFA SFFRS LKPS ICRHSP FSSLFSSLSASSAAS+EA+R+LRDGPRN+WTRQ+IRD+YDSP+LDLLFHG        +F    QC   +  T    
Subjt:  MLFAGSFFRSQLKPSHICRHSPGFSSLFSSLSASSAASIEADRVLRDGPRNNWTRQEIRDVYDSPVLDLLFHGVSASLSPISF----QCGTKTSHTALVP

Query:  NNCP-SPESRR
         +C   P+S R
Subjt:  NNCP-SPESRR

A0A1S3BDC5 Biotin synthase

2.3e-26

63.06

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Query:  MLFAGSFFRSQLKPSHICRHSPGFSSLFSSLSASSAASIEADRVLRDGPRNNWTRQEIRDVYDSPVLDLLFHGVSASLSPISF----QCGTKTSHTALVP
        MLFA SFF S LKPS ICRHSP FSSLFSSLSASSAASIEA+R+LRDGPRN+WTRQ+IRD+YDSP+LDLLFHG        +F    QC   +  T    
Subjt:  MLFAGSFFRSQLKPSHICRHSPGFSSLFSSLSASSAASIEADRVLRDGPRNNWTRQEIRDVYDSPVLDLLFHGVSASLSPISF----QCGTKTSHTALVP

Query:  NNCP-SPESRR
         +C   P+S R
Subjt:  NNCP-SPESRR

A0A6J1D9U9 Biotin synthase

8.8e-26

63.06

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Query:  MLFAGSFFRSQLKPSHICRHSPGFSSLFSSLSASSAASIEADRVLRDGPRNNWTRQEIRDVYDSPVLDLLFHGVSASLSPISF----QCGTKTSHTALVP
        MLF  SFFRSQ +PS ICRHSP FS LFSS SASSAASIEA+RVL DGPRNNWTRQ+IRDVYDSPVLDLLFHG        +F    QC   +  T    
Subjt:  MLFAGSFFRSQLKPSHICRHSPGFSSLFSSLSASSAASIEADRVLRDGPRNNWTRQEIRDVYDSPVLDLLFHGVSASLSPISF----QCGTKTSHTALVP

Query:  NNCP-SPESRR
         +C   P+S R
Subjt:  NNCP-SPESRR

A0A6J1EPY7 Biotin synthase

6.1e-27

65.77

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Query:  MLFAGSFFRSQLKPSHICRHSPGFSSLFSSLSASSAASIEADRVLRDGPRNNWTRQEIRDVYDSPVLDLLFHGVSASLSPISF----QCGTKTSHTALVP
        MLFA SF RS LKPS I RHSP FSSLFSSLSASSAASIEADR+LRDGPRNNWTRQEIRD+YDSPVLDLLFHG        +F    QC   +  T    
Subjt:  MLFAGSFFRSQLKPSHICRHSPGFSSLFSSLSASSAASIEADRVLRDGPRNNWTRQEIRDVYDSPVLDLLFHGVSASLSPISF----QCGTKTSHTALVP

Query:  NNCP-SPESRR
         +C   P+S R
Subjt:  NNCP-SPESRR

A0A6J1JVA1 Biotin synthase

6.1e-27

65.77

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Query:  MLFAGSFFRSQLKPSHICRHSPGFSSLFSSLSASSAASIEADRVLRDGPRNNWTRQEIRDVYDSPVLDLLFHGVSASLSPISF----QCGTKTSHTALVP
        MLFA SF RS LKPS I RHSP FSSLFSSLSASSAASIEADR+LRDGPRNNWTRQEIRD+YDSPVLDLLFHG        +F    QC   +  T    
Subjt:  MLFAGSFFRSQLKPSHICRHSPGFSSLFSSLSASSAASIEADRVLRDGPRNNWTRQEIRDVYDSPVLDLLFHGVSASLSPISF----QCGTKTSHTALVP

Query:  NNCP-SPESRR
         +C   P+S R
Subjt:  NNCP-SPESRR

SwissProt top hits

e value

%identity

Alignment

P54967 Biotin synthase, mitochondrial

1.3e-13

45.05

Show/hide

Query:  MLFAGSFFRSQLKPSHICRHSPGFSSLFSSLSASSAASIEADRVLRDGPRNNWTRQEIRDVYDSPVLDLLFHGVSASLSPISF----QCGTKTSHTALVP
        M+   S FRSQL+PS     S G  S  S  S+ SAAS EA+R +R+GPRN+W+R EI+ VYDSP+LDLLFHG        +F    QC   +  T    
Subjt:  MLFAGSFFRSQLKPSHICRHSPGFSSLFSSLSASSAASIEADRVLRDGPRNNWTRQEIRDVYDSPVLDLLFHGVSASLSPISF----QCGTKTSHTALVP

Query:  NNCP-SPESRR
         +C   P+S R
Subjt:  NNCP-SPESRR

Arabidopsis top hits

e value

%identity

Alignment

AT2G43360.1 Radical SAM superfamily protein

9.0e-15

45.05

Show/hide

Query:  MLFAGSFFRSQLKPSHICRHSPGFSSLFSSLSASSAASIEADRVLRDGPRNNWTRQEIRDVYDSPVLDLLFHGVSASLSPISF----QCGTKTSHTALVP
        M+   S FRSQL+PS     S G  S  S  S+ SAAS EA+R +R+GPRN+W+R EI+ VYDSP+LDLLFHG        +F    QC   +  T    
Subjt:  MLFAGSFFRSQLKPSHICRHSPGFSSLFSSLSASSAASIEADRVLRDGPRNNWTRQEIRDVYDSPVLDLLFHGVSASLSPISF----QCGTKTSHTALVP

Query:  NNCP-SPESRR
         +C   P+S R
Subjt:  NNCP-SPESRR

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCTATTTGCTGGATCATTTTTCCGGTCCCAGCTGAAACCCTCACACATTTGCCGCCATTCTCCGGGTTTTTCTTCGCTGTTTTCGTCCCTTTCAGCTTCTTCCGCAGC
GTCAATTGAAGCCGACAGGGTTCTCAGAGATGGGCCGAGGAATAATTGGACTCGACAAGAGATTCGAGACGTTTACGACTCTCCTGTTCTCGATCTACTTTTCCATGGGG
TTAGTGCCTCTTTATCTCCCATATCTTTCCAATGTGGGACAAAGACATCCCATACTGCATTGGTCCCTAACAATTGCCCCTCCCCGGAAAGCCGACGTCTCGGCGGCTGT
GCACGGCGACGCTTCACTCGGCTGGTTCCGGTCAGCCCCTCCGCCGCCACTCCTCTCCGAAGCCGTCGACCACCGGCTCTGATACCAATTGTTAGGCGATTGGGGAGGGA
GAACCAACCACTTATATACCCCATTAGAAGCCCATATCTTTCCAATGTGGGACAAAGGCATCCCATACTGCATTGGTCCCTAACAATTGCCCCTCCCCGGAAAGCCGACG
TCTCGGCGGCTGTGCACGGCGACGCTTCACTCGGCTGGTTCCGGTCAGCCCCTCCGCCGCCACTCCTCTCCGAAGCCGTCGACCACCGGCTCTGA

mRNA sequence

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Protein sequence

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MLFAGSFFRSQLKPSHICRHSPGFSSLFSSLSASSAASIEADRVLRDGPRNNWTRQEIRDVYDSPVLDLLFHGVSASLSPISFQCGTKTSHTALVPNNCPSPESRRLGGC
ARRRFTRLVPVSPSAATPLRSRRPPALIPIVRRLGRENQPLIYPIRSPYLSNVGQRHPILHWSLTIAPPRKADVSAAVHGDASLGWFRSAPPPPLLSEAVDHRL

Spg014788 (gene) of Sponge gourd (cylindrica) v1 genome