| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_022142704.1 DNA-directed RNA polymerases II and IV subunit 5A [Momordica charantia] | 1.3e-100 | 92.23 | Show/hide |
Query: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVL++EEITRLFRIRKTVLQMLKDR YFVGDFEI MSREQF++KYGE+MKRED+VINKA+RNDSSDQIY+FFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCI EISSKFHLEVFQEAEL+VNIKDHVL+PEHQLL EEKKTLLERYTVKETQLPRIQVTDP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022143609.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Momordica charantia] | 1.2e-106 | 99.51 | Show/hide |
Query: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLL NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022953770.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita moschata] | 1.1e-104 | 96.6 | Show/hide |
Query: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVLSEEEITRLFRIRKTVLQMLKDR YFVGDFEIDMSREQFKHKYGE+MKRED+VINKA+RNDSSDQIYVFFPEEQKVGVKTMKTYTNRMK+ENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEISSKFHLEVFQEAELLVN+KDHVLVPEHQLL NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022959553.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita moschata] | 8.0e-103 | 94.66 | Show/hide |
Query: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVL+EEEITRLFR+RKTVLQMLKDR YFVGDFE+DMSREQFK+KYGE+MKREDIVINKA+RNDSSDQIY+FFPEE KVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEIS+KFHLEVFQEAELLVNIKDHVLVPEHQLL+NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022991826.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita maxima] | 8.5e-105 | 97.09 | Show/hide |
Query: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVLSEEEITRLFRIRKTVLQMLKDR YFVGDFEIDMSREQFKHKYGE+MKREDIVINKA+RNDSSDQIYVFFPEEQKVGVKTMKTYTNRMK+ENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEISSKFHLEVFQEAELLVN+KDHVLVPEHQLL NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1CPU1 DNA-directed RNA polymerases II and IV subunit 5A-like | 5.7e-107 | 99.51 | Show/hide |
Query: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLL NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1GQK9 DNA-directed RNA polymerases II and IV subunit 5A-like | 5.4e-105 | 96.6 | Show/hide |
Query: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVLSEEEITRLFRIRKTVLQMLKDR YFVGDFEIDMSREQFKHKYGE+MKRED+VINKA+RNDSSDQIYVFFPEEQKVGVKTMKTYTNRMK+ENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEISSKFHLEVFQEAELLVN+KDHVLVPEHQLL NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1H699 DNA-directed RNA polymerases II and IV subunit 5A-like | 3.9e-103 | 94.66 | Show/hide |
Query: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVL+EEEITRLFR+RKTVLQMLKDR YFVGDFE+DMSREQFK+KYGE+MKREDIVINKA+RNDSSDQIY+FFPEE KVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEIS+KFHLEVFQEAELLVNIKDHVLVPEHQLL+NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1JRV4 DNA-directed RNA polymerases II and IV subunit 5A-like | 4.1e-105 | 97.09 | Show/hide |
Query: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVLSEEEITRLFRIRKTVLQMLKDR YFVGDFEIDMSREQFKHKYGE+MKREDIVINKA+RNDSSDQIYVFFPEEQKVGVKTMKTYTNRMK+ENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEISSKFHLEVFQEAELLVN+KDHVLVPEHQLL NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1KT45 DNA-directed RNA polymerases II and IV subunit 5A-like | 3.9e-103 | 94.66 | Show/hide |
Query: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVL+EEEITRLFR+RKTVLQMLKDR YFVGDFE+DMSREQFK+KYGE+MKREDIVINKA+RNDSSDQIY+FFPEE KVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEIS+KFHLEVFQEAELLVNIKDHVLVPEHQLL+NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| B0BNE2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 9.9e-56 | 52.91 | Show/hide |
Query: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGE-----NMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
EEE RL++IRKT++Q+ DR Y V E+D + E+FK ++G+ +R D+ + A +D +DQ++VFFPEE KVG+KT+K Y RM+ EN+ RA+
Subjt: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGE-----NMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
Query: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
+VVQQ +TP A+ + +++ K+ LE F + ELL+NI +H LVPEH ++ EE LL RY ++E+QLPRIQ DPVARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| O81098 DNA-directed RNA polymerases II and IV subunit 5A | 1.1e-91 | 80.98 | Show/hide |
Query: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
+L+EEE+ RL+RI+KT++QML+DR YF+ D E+ M+++QF K+G+NMKRED+V KA+RND+SDQ+Y+FFP+E KVGVKTMK YTNRMKSENVFRAILV
Subjt: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
Query: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
VQQNLTPFARTCISEISSKFHLEVFQEAE+LVNIK+HVLVPEHQ+L EEKKTLLERYTVKETQLPRIQVTDP+ARY+GLKRGQVVKIIRPSETAGRYVT
Subjt: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| Q5R587 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 2.9e-55 | 52.43 | Show/hide |
Query: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGE-----NMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
EEE RL++IRKT++Q+ DR Y V E+D + E+F+ ++G+ +R D+ + A +D +DQ++VFFPEE KVG+KT+K Y RM+ EN+ RA+
Subjt: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGE-----NMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
Query: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
+VVQQ +TP A+ + +++ K+ LE F + ELL+NI +H LVPEH ++ EE LL RY ++E QLPRIQ DPVARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| Q80UW8 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 9.9e-56 | 52.91 | Show/hide |
Query: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGE-----NMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
EEE RL++IRKT++Q+ DR Y V E+D + E+FK ++G+ +R D+ + A +D +DQ++VFFPEE KVG+KT+K Y RM+ EN+ RA+
Subjt: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGE-----NMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
Query: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
+VVQQ +TP A+ + +++ K+ LE F + ELL+NI +H LVPEH ++ EE LL RY ++E+QLPRIQ DPVARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| Q9N5K2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 2.2e-55 | 54.5 | Show/hide |
Query: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMK-----REDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENV
M E E RL+RIRKTVLQM+ DR Y V E+D E FK +YG+ R D+ I A +D +DQ++VFFPE+ K+G+KT+K +M+ +N+
Subjt: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMK-----REDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENV
Query: FRAILVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSET
RAI+VVQ +TP A+ I +++ K+ LE F EAEL+VNI +H LVPEH ++ EEK LL RY +K++QLPRIQ DPVARY+GL+RGQVVKIIRPSET
Subjt: FRAILVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSET
Query: AGRYVTYRYVV
AGRY+TYR VV
Subjt: AGRYVTYRYVV
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G41340.1 RNA polymerase II fifth largest subunit, D | 3.5e-32 | 38.92 | Show/hide |
Query: SEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTY-TNRMKSENVFRAILVV
S E + + R+T ++ML+DR Y V D +I++S +QF+ YGE+ + + I+ R DSS +I V F V V M+ + + EN+ ILV+
Subjt: SEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTY-TNRMKSENVFRAILVV
Query: QQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTY
Q ++T A + S F +E+F+ +LLVN+ HVL P+HQ+LN++EK++LL++++++E QLPR+ DP+ RYYGL+ GQV+K+ E + +VTY
Subjt: QQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTY
Query: RYV
R V
Subjt: RYV
|
|
| AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 8.0e-93 | 80.98 | Show/hide |
Query: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
+L+EEE+ RL+RI+KT++QML+DR YF+ D E+ M+++QF K+G+NMKRED+V KA+RND+SDQ+Y+FFP+E KVGVKTMK YTNRMKSENVFRAILV
Subjt: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
Query: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
VQQNLTPFARTCISEISSKFHLEVFQEAE+LVNIK+HVLVPEHQ+L EEKKTLLERYTVKETQLPRIQVTDP+ARY+GLKRGQVVKIIRPSETAGRYVT
Subjt: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| AT3G54490.1 RNA polymerase II fifth largest subunit, E | 1.1e-25 | 33.83 | Show/hide |
Query: EITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSE-NVFRAILVVQQN
E R + R T +ML+DR Y V + E+ ++ +F+ +GE + E + I R+D +I V F + + VK+++ ++ + + ILV+Q
Subjt: EITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSE-NVFRAILVVQQN
Query: LTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYV
+ FA+ ++ + F +E F +LLVNI H+ P+ ++LN EEK+ LL ++ +++ QLP +Q D RYYGLK+ QVVKI E G +VTYR +
Subjt: LTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYV
Query: V
+
Subjt: V
|
|
| AT3G57080.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 3.9e-31 | 39.22 | Show/hide |
Query: LSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKT-YTNRMKSENVFRAILV
LS EE R + R+ LQML+DR Y V D +I++S F+ YGE + + I+ R+DS+ ++ + F V V +++ + + E + ILV
Subjt: LSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKT-YTNRMKSENVFRAILV
Query: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
+Q ++T A I S F +E+FQ +LLVNI H L P+HQ+LN+EEK TLL++++++E QLPRI D + RYYGL++GQVVK+ E +V
Subjt: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYV
+R V
Subjt: YRYV
|
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| AT5G57980.1 RNA polymerase II fifth largest subunit, C | 1.1e-44 | 45.63 | Show/hide |
Query: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENM---KREDIVINKARRNDSSDQIYVFFPEEQKVGVKTM-KTYTNRMKSENVFRAIL
++EITR+F++R+TVLQML+DR Y + + ++++ RE+F ++ + M +E + ++ + + +D+IYVF+PE KVGV + K +M+ + V R I+
Subjt: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENM---KREDIVINKARRNDSSDQIYVFFPEEQKVGVKTM-KTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VV +T AR +SE++ +EVF+EAEL+ NI +H LV ++ +L+++ KK LL YTV++TQLPRI VTDP+ARYYGLKRGQVVKI R T+ Y
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYR+ V
Subjt: TYRYVV
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