; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg014886 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg014886
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionzinc finger protein GIS2
Genome locationscaffold3:33514385..33517984
RNA-Seq ExpressionSpg014886
SyntenySpg014886
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148537.1 zinc finger protein GIS2 [Cucumis sativus]4.1e-12483.46Show/hide
Query:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFR-------------------------------HIASECTTKSLCWNCREPGHMANSCPN
        MSSDSRSRSRSRSRSPL+RKIRSDRFSYRDAPYRRESRRGF                                HIASECTTKSLCWNCREPGHMA+SCPN
Subjt:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFR-------------------------------HIASECTTKSLCWNCREPGHMANSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRAR+CTAPP+PPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGI SGGG
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        S RG   GYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFM+R+PRRY
Subjt:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

XP_008448055.1 PREDICTED: zinc finger protein GIS2 [Cucumis melo]8.2e-12584.23Show/hide
Query:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFR-------------------------------HIASECTTKSLCWNCREPGHMANSCPN
        MSSDSRSRSRSRSRSPL+RKIRSDRFSYRDAPYRRESRRGF                                HIASECTTKSLCWNCREPGHMA+SCPN
Subjt:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFR-------------------------------HIASECTTKSLCWNCREPGHMANSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRAR+CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGI SGGG
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        S RG   GYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFM+RYPRRY
Subjt:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

XP_022136056.1 zinc finger protein GIS2 [Momordica charantia]1.7e-12585.06Show/hide
Query:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFR-------------------------------HIASECTTKSLCWNCREPGHMANSCPN
        MSSDSRSRSRSRSRSPL+RKIRSDRF+YRDAPYRRESRRGF                                HIASECTTKSLCWNCREPGHMANSCPN
Subjt:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFR-------------------------------HIASECTTKSLCWNCREPGHMANSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSN+L DR DRGIGSGGG
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGA-GGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        SVRGG+ GGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
Subjt:  SVRGGA-GGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

XP_022971383.1 zinc finger protein GIS2-like [Cucurbita maxima]8.2e-12584.23Show/hide
Query:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFR-------------------------------HIASECTTKSLCWNCREPGHMANSCPN
        MSSDSRSRSRSRSRSP+ RKIRSDRFSYRDAPYRRESRRGF                                HIASECTTKSLCWNCREPGH+A+SC N
Subjt:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFR-------------------------------HIASECTTKSLCWNCREPGHMANSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        S+RGG GGYRDVVCR CQQLGHMSRDCM PLMICHNCGGRGHLAYECPSGRFMERYPRRY
Subjt:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

XP_038887879.1 zinc finger protein GIS2 [Benincasa hispida]4.4e-12684.62Show/hide
Query:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFR-------------------------------HIASECTTKSLCWNCREPGHMANSCPN
        MSSDSRSRSRSRSRSPL+RKIRSDRFSYRDAPYRRESRRGF                                HIASECTTKSLCWNCREPGHMA+SCPN
Subjt:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFR-------------------------------HIASECTTKSLCWNCREPGHMANSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRAR+CTAPP+PPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        S RGGA GYRDVVCRNCQQLGHMSRDCMGPL+ICHNCGGRGHLAYECPSGRFM+RYPRRY
Subjt:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

TrEMBL top hitse value%identityAlignment
A0A0A0K138 Uncharacterized protein2.0e-12483.46Show/hide
Query:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFR-------------------------------HIASECTTKSLCWNCREPGHMANSCPN
        MSSDSRSRSRSRSRSPL+RKIRSDRFSYRDAPYRRESRRGF                                HIASECTTKSLCWNCREPGHMA+SCPN
Subjt:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFR-------------------------------HIASECTTKSLCWNCREPGHMANSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRAR+CTAPP+PPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGI SGGG
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        S RG   GYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFM+R+PRRY
Subjt:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

A0A1S3BIU7 zinc finger protein GIS24.0e-12584.23Show/hide
Query:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFR-------------------------------HIASECTTKSLCWNCREPGHMANSCPN
        MSSDSRSRSRSRSRSPL+RKIRSDRFSYRDAPYRRESRRGF                                HIASECTTKSLCWNCREPGHMA+SCPN
Subjt:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFR-------------------------------HIASECTTKSLCWNCREPGHMANSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRAR+CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGI SGGG
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        S RG   GYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFM+RYPRRY
Subjt:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

A0A6J1C2F8 zinc finger protein GIS28.0e-12685.06Show/hide
Query:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFR-------------------------------HIASECTTKSLCWNCREPGHMANSCPN
        MSSDSRSRSRSRSRSPL+RKIRSDRF+YRDAPYRRESRRGF                                HIASECTTKSLCWNCREPGHMANSCPN
Subjt:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFR-------------------------------HIASECTTKSLCWNCREPGHMANSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSN+L DR DRGIGSGGG
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGA-GGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        SVRGG+ GGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
Subjt:  SVRGGA-GGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

A0A6J1EYM8 zinc finger protein GIS2-like2.9e-12383.52Show/hide
Query:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFR-------------------------------HIASECTTKSLCWNCREPGHMANSCPN
        MSSDSRSRSRSRSRSP+ RKIRSDRFSYRDAPYRRESRRGF                                HIASECTTKSLCWNCREPGH+A+SC N
Subjt:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFR-------------------------------HIASECTTKSLCWNCREPGHMANSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLG+RGDRGIGSGGG
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVR-GGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        S+R GG GGYRDVVCR CQQLGHMSRDCM PLMICHNCGGRGHLAYECPSGRFMERYPRRY
Subjt:  SVR-GGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

A0A6J1I6P4 zinc finger protein GIS2-like4.0e-12584.23Show/hide
Query:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFR-------------------------------HIASECTTKSLCWNCREPGHMANSCPN
        MSSDSRSRSRSRSRSP+ RKIRSDRFSYRDAPYRRESRRGF                                HIASECTTKSLCWNCREPGH+A+SC N
Subjt:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFR-------------------------------HIASECTTKSLCWNCREPGHMANSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        S+RGG GGYRDVVCR CQQLGHMSRDCM PLMICHNCGGRGHLAYECPSGRFMERYPRRY
Subjt:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

SwissProt top hitse value%identityAlignment
O42395 Cellular nucleic acid-binding protein3.5e-1730.54Show/hide
Query:  RRESRRGFRHIASECTTKSLCWNCREPGHMANSC--PNEGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADC--TNEKACNNCRKTGHLAR
        R   R GF+ ++S  +   +C+ C E GH+A  C    +  C+ CG+ GH A++C  P       + C NC K GH+A DC   +E+ C +C + GH+ +
Subjt:  RRESRRGFRHIASECTTKSLCWNCREPGHMANSC--PNEGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADC--TNEKACNNCRKTGHLAR

Query:  DCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGSVRGGAGGYRDVVCRNCQQLGHMSRDC
        DC     C  C  +GHVA  C K++                         +V C  C + GH++R+C
Subjt:  DCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGSVRGGAGGYRDVVCRNCQQLGHMSRDC

O65639 Cold shock protein 13.8e-1631.49Show/hide
Query:  CWNCREPGHMANSCPNEGI-------------CHTCGKAGHRARECTAPPLPPGDLR--------LCNNCYKQGHIAADCTNEKA-------------CN
        C+NC + GH A  C + G              C+TCG  GH AR+CT   +  GD R         C  C   GH A DCT + A             C 
Subjt:  CWNCREPGHMANSCPNEGI-------------CHTCGKAGHRARECTAPPLPPGDLR--------LCNNCYKQGHIAADCTNEKA-------------CN

Query:  NCRKTGHLARDCPN----DPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGSVRGGAGGYRDVVCRNCQQLGHMSRDC
        +C   GH+ARDC         C  C  SGH+AR C +                   RG  GG  D  C  C + GH +R+C
Subjt:  NCRKTGHLARDCPN----DPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGSVRGGAGGYRDVVCRNCQQLGHMSRDC

P36627 Cellular nucleic acid-binding protein homolog3.1e-1837.42Show/hide
Query:  CHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCT---NEKACNNCRKTGHLARDCPNDP------ICNLCNVSGHVARQCPKSNVLGDRGDRG
        C+ CG+ GH+ARECT          +C NC + GH A++CT    EK C  C   GHL RDCP+ P       C  C   GH+AR C             
Subjt:  CHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCT---NEKACNNCRKTGHLARDCPNDP------ICNLCNVSGHVARQCPKSNVLGDRGDRG

Query:  IGSGGGSVRGGAGGYR-DVVCRNCQQLGHMSRDC-MGPLMICHNCGGRGHLAYEC
          + G    G  GG+R ++ C  C   GH +RDC MG  + C++CG  GH ++EC
Subjt:  IGSGGGSVRGGAGGYR-DVVCRNCQQLGHMSRDC-MGPLMICHNCGGRGHLAYEC

P53849 Zinc finger protein GIS28.5e-2431.25Show/hide
Query:  TKSLCWNCREPGHMANSCPNEGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCP--------NDPICNLCN
        ++  C+ C + GH+A  C +E +C+ C K GH   +CT P     + + C NC + GH+ ++CT ++ C NC +TGH++R+CP        +   C  C 
Subjt:  TKSLCWNCREPGHMANSCPNEGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCP--------NDPICNLCN

Query:  VSGHVARQCPKSNVLGDRGDRGIGSGGGSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECP
           H+A+ C K +                      G   + C  C Q GHMSRDC     +C+NC   GH++ +CP
Subjt:  VSGHVARQCPKSNVLGDRGDRGIGSGGGSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECP

Q8T8R1 CCHC-type zinc finger protein CG38008.0e-1429.07Show/hide
Query:  CWNCREPGHMANSCP------NEGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNE-KACNNCRKTGHLARDC--PNDPICNLCNVSG
        C+ C  PGH A  C         G+    G  G   R      +   +   C  C + GH A  C  E + C  C   GH+++DC   ++P C  CN +G
Subjt:  CWNCREPGHMANSCP------NEGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNE-KACNNCRKTGHLARDC--PNDPICNLCNVSG

Query:  HVARQCPKSNVLGDRGDRGIGSGGGSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYEC
        H  R CP++  + +RG                   +V C  C + GH+S++C      C+ CG  GHL  EC
Subjt:  HVARQCPKSNVLGDRGDRGIGSGGGSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYEC

Arabidopsis top hitse value%identityAlignment
AT1G75560.1 zinc knuckle (CCHC-type) family protein3.6e-7053.61Show/hide
Query:  SDSRSRSRSRSRSPLERKIRSDRFSYRDAPYR--RESRRGFR-------------------------------HIASECTTKSLCWNCREPGHMANSCPN
        S SRSR R RSRSP +R++RS+R SY DAP R  RE RR F                                HIA+ECT +S CWNCREPGH+A++C N
Subjt:  SDSRSRSRSRSRSPLERKIRSDRFSYRDAPYR--RESRRGFR-------------------------------HIASECTTKSLCWNCREPGHMANSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNV-LGDRGDRGIGSGG
        EGICH+CGK+GHRAR+C+      GDLRLCNNC+KQGH+AADCTN+KAC NCR +GH+ARDC NDP+CN+C++SGHVAR CPK +    DRG R     G
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNV-LGDRGDRGIGSGG

Query:  GSVRGGAGGYRDVVCRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMERYPRRY
        G  RGG              L  MSRD  G   ++ICHNCGGRGH AYECPS R  +R  RRY
Subjt:  GSVRGGAGGYRDVVCRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMERYPRRY

AT1G75560.2 zinc knuckle (CCHC-type) family protein3.6e-7053.61Show/hide
Query:  SDSRSRSRSRSRSPLERKIRSDRFSYRDAPYR--RESRRGFR-------------------------------HIASECTTKSLCWNCREPGHMANSCPN
        S SRSR R RSRSP +R++RS+R SY DAP R  RE RR F                                HIA+ECT +S CWNCREPGH+A++C N
Subjt:  SDSRSRSRSRSRSPLERKIRSDRFSYRDAPYR--RESRRGFR-------------------------------HIASECTTKSLCWNCREPGHMANSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNV-LGDRGDRGIGSGG
        EGICH+CGK+GHRAR+C+      GDLRLCNNC+KQGH+AADCTN+KAC NCR +GH+ARDC NDP+CN+C++SGHVAR CPK +    DRG R     G
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNV-LGDRGDRGIGSGG

Query:  GSVRGGAGGYRDVVCRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMERYPRRY
        G  RGG              L  MSRD  G   ++ICHNCGGRGH AYECPS R  +R  RRY
Subjt:  GSVRGGAGGYRDVVCRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMERYPRRY

AT2G17870.1 cold shock domain protein 32.6e-1231.87Show/hide
Query:  EGICHTCGKAGHRARECTA-----PPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGI
        EG C+ CG  GH AR+C            G  R C +C + GH+A DC      N  R  G   R    D  C +C   GH AR C +            
Subjt:  EGICHTCGKAGHRARECTA-----PPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGI

Query:  GSGGGSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPL--------MICHNCGGRGHLAYEC
         +GGG+V GG        C  C  +GH+++ C   +          C+ CGG GHLA +C
Subjt:  GSGGGSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPL--------MICHNCGGRGHLAYEC

AT3G43590.1 zinc knuckle (CCHC-type) family protein1.6e-0924.88Show/hide
Query:  HIASECTT----KSLCWNCREPGHMANSCPNEGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKA--------CNNCRKTGHLARD
        H +  C T    +  C+ C    H A  C     C+ C K GHRA++C           +C  C   GH    C  E +        C  C+  GHL   
Subjt:  HIASECTT----KSLCWNCREPGHMANSCPNEGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKA--------CNNCRKTGHLARD

Query:  CPNDPI-----CNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMI-----------CHNCGGRGHLAY
         P + +     C  C   GH    C +     +  D        + R  +  YR      C + GH +R+C     I           C+ C G GH A 
Subjt:  CPNDPI-----CNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMI-----------CHNCGGRGHLAY

Query:  ECPSGRFMERYPR
        ECP+   + +  R
Subjt:  ECPSGRFMERYPR

AT4G36020.1 cold shock domain protein 12.7e-1731.49Show/hide
Query:  CWNCREPGHMANSCPNEGI-------------CHTCGKAGHRARECTAPPLPPGDLR--------LCNNCYKQGHIAADCTNEKA-------------CN
        C+NC + GH A  C + G              C+TCG  GH AR+CT   +  GD R         C  C   GH A DCT + A             C 
Subjt:  CWNCREPGHMANSCPNEGI-------------CHTCGKAGHRARECTAPPLPPGDLR--------LCNNCYKQGHIAADCTNEKA-------------CN

Query:  NCRKTGHLARDCPN----DPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGSVRGGAGGYRDVVCRNCQQLGHMSRDC
        +C   GH+ARDC         C  C  SGH+AR C +                   RG  GG  D  C  C + GH +R+C
Subjt:  NCRKTGHLARDCPN----DPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGSVRGGAGGYRDVVCRNCQQLGHMSRDC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCAGATAGCAGAAGTCGGAGCAGGAGCAGGAGCAGGAGCCCACTGGAACGTAAGATCCGGTCTGACCGTTTTTCATATCGTGATGCACCATACAGGAGAGAATC
ACGTCGGGGTTTCAGGCATATTGCTTCAGAGTGCACAACAAAGTCACTATGTTGGAATTGTCGAGAACCTGGTCACATGGCAAATAGCTGTCCGAATGAAGGCATCTGCC
ACACCTGTGGTAAGGCGGGACATCGGGCCAGGGAATGCACGGCTCCTCCGCTGCCACCTGGGGACTTGAGGCTTTGCAATAATTGCTATAAGCAAGGTCATATAGCAGCT
GATTGTACTAATGAGAAGGCATGCAACAATTGCAGGAAGACTGGCCATCTGGCTCGCGATTGTCCGAACGATCCCATTTGCAACCTGTGTAATGTATCAGGGCATGTGGC
CAGACAGTGTCCAAAATCCAATGTCCTTGGAGACCGGGGAGACCGAGGCATTGGCAGTGGTGGTGGCAGCGTCCGTGGTGGTGCTGGTGGTTACCGGGATGTTGTGTGCA
GGAACTGCCAGCAGCTTGGCCATATGAGTAGGGATTGTATGGGTCCTTTGATGATCTGTCATAACTGCGGGGGACGTGGTCACCTGGCATACGAATGCCCTTCTGGTCGT
TTTATGGAGCGTTATCCCAGGAGGTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCAGATAGCAGAAGTCGGAGCAGGAGCAGGAGCAGGAGCCCACTGGAACGTAAGATCCGGTCTGACCGTTTTTCATATCGTGATGCACCATACAGGAGAGAATC
ACGTCGGGGTTTCAGGCATATTGCTTCAGAGTGCACAACAAAGTCACTATGTTGGAATTGTCGAGAACCTGGTCACATGGCAAATAGCTGTCCGAATGAAGGCATCTGCC
ACACCTGTGGTAAGGCGGGACATCGGGCCAGGGAATGCACGGCTCCTCCGCTGCCACCTGGGGACTTGAGGCTTTGCAATAATTGCTATAAGCAAGGTCATATAGCAGCT
GATTGTACTAATGAGAAGGCATGCAACAATTGCAGGAAGACTGGCCATCTGGCTCGCGATTGTCCGAACGATCCCATTTGCAACCTGTGTAATGTATCAGGGCATGTGGC
CAGACAGTGTCCAAAATCCAATGTCCTTGGAGACCGGGGAGACCGAGGCATTGGCAGTGGTGGTGGCAGCGTCCGTGGTGGTGCTGGTGGTTACCGGGATGTTGTGTGCA
GGAACTGCCAGCAGCTTGGCCATATGAGTAGGGATTGTATGGGTCCTTTGATGATCTGTCATAACTGCGGGGGACGTGGTCACCTGGCATACGAATGCCCTTCTGGTCGT
TTTATGGAGCGTTATCCCAGGAGGTACTGA
Protein sequenceShow/hide protein sequence
MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFRHIASECTTKSLCWNCREPGHMANSCPNEGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAA
DCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGR
FMERYPRRY