; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg014908 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg014908
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCR4-NOT transcription complex subunit like
Genome locationscaffold3:46689698..46692735
RNA-Seq ExpressionSpg014908
SyntenySpg014908
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593336.1 hypothetical protein SDJN03_12812, partial [Cucurbita argyrosperma subsp. sororia]2.0e-4377.95Show/hide
Query:  MASIFAAPPSQLNLSSRRPSLIHRAVLPSSILGIQFHSNGFPISSFRYRNNKGLKLSQRSFSITASNSSDGNSTKKENDGSKATADAQGPPFLTILAGLF
        MAS+FAAPPSQ++LSS RPSL H+A LP SI+G++FH NGFPI SFRY+N KGL+L QRSFSITASNSSDGNSTK++NDGSK T DAQGPPFLTILAG F
Subjt:  MASIFAAPPSQLNLSSRRPSLIHRAVLPSSILGIQFHSNGFPISSFRYRNNKGLKLSQRSFSITASNSSDGNSTKKENDGSKATADAQGPPFLTILAGLF

Query:  VFSLVIWIITSAVTSLIGLVVKLISTK
        VFSLV+WI++S+VT+LI LVVKLISTK
Subjt:  VFSLVIWIITSAVTSLIGLVVKLISTK

KAG7025683.1 hypothetical protein SDJN02_12181 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-4377.95Show/hide
Query:  MASIFAAPPSQLNLSSRRPSLIHRAVLPSSILGIQFHSNGFPISSFRYRNNKGLKLSQRSFSITASNSSDGNSTKKENDGSKATADAQGPPFLTILAGLF
        MAS+FAAPPSQ++LSS RPSL H+A LP SI+G++FH NGFPI SFRY+N KGL+L QRSFSITASNSSDGNSTK++NDGSK T+DAQGPPFLTILAG F
Subjt:  MASIFAAPPSQLNLSSRRPSLIHRAVLPSSILGIQFHSNGFPISSFRYRNNKGLKLSQRSFSITASNSSDGNSTKKENDGSKATADAQGPPFLTILAGLF

Query:  VFSLVIWIITSAVTSLIGLVVKLISTK
        VFSLV+WI++S+VT+LI LVVKLISTK
Subjt:  VFSLVIWIITSAVTSLIGLVVKLISTK

XP_022953425.1 uncharacterized protein LOC111455984 [Cucurbita moschata]1.2e-4380.31Show/hide
Query:  MASIFAAPPSQLNLSSRRPSLIHRAVLPSSILGIQFHSNGFPISSFRYRNNKGLKLSQRSFSITASNSSDGNSTKKENDGSKATADAQGPPFLTILAGLF
        MASIF+APPS+LNL+S RPSLIH AVLPSSI GIQ+HSN FPI SFRYRN KGL+L QRSFSITASNSSDGNS K+EN  SKA++DAQGPPFLTILAG+F
Subjt:  MASIFAAPPSQLNLSSRRPSLIHRAVLPSSILGIQFHSNGFPISSFRYRNNKGLKLSQRSFSITASNSSDGNSTKKENDGSKATADAQGPPFLTILAGLF

Query:  VFSLVIWIITSAVTSLIGLVVKLISTK
        VFSL++W+++SA TSLIGLVVKLISTK
Subjt:  VFSLVIWIITSAVTSLIGLVVKLISTK

XP_022959607.1 uncharacterized protein LOC111460632 [Cucurbita moschata]2.6e-4378.74Show/hide
Query:  MASIFAAPPSQLNLSSRRPSLIHRAVLPSSILGIQFHSNGFPISSFRYRNNKGLKLSQRSFSITASNSSDGNSTKKENDGSKATADAQGPPFLTILAGLF
        MAS+FAAPPSQL LSS RPSL H+A LP SI+G++FH NGFPI SFRY+N KGLKL QRSFSITASNSSDGNSTK++NDGSK T DAQGPPFLTILAG F
Subjt:  MASIFAAPPSQLNLSSRRPSLIHRAVLPSSILGIQFHSNGFPISSFRYRNNKGLKLSQRSFSITASNSSDGNSTKKENDGSKATADAQGPPFLTILAGLF

Query:  VFSLVIWIITSAVTSLIGLVVKLISTK
        VFSLV+WI++S+VT+LI L VKLISTK
Subjt:  VFSLVIWIITSAVTSLIGLVVKLISTK

XP_023004845.1 uncharacterized protein LOC111498025 [Cucurbita maxima]3.0e-4480.31Show/hide
Query:  MASIFAAPPSQLNLSSRRPSLIHRAVLPSSILGIQFHSNGFPISSFRYRNNKGLKLSQRSFSITASNSSDGNSTKKENDGSKATADAQGPPFLTILAGLF
        MAS+FAAPPSQL LSS RPSL H+A LP SI+G++FH NGFPI SFRY+N KGLKL QRSFSITASNSSDGNSTK+ENDGSK T DAQGPPFLTILAG F
Subjt:  MASIFAAPPSQLNLSSRRPSLIHRAVLPSSILGIQFHSNGFPISSFRYRNNKGLKLSQRSFSITASNSSDGNSTKKENDGSKATADAQGPPFLTILAGLF

Query:  VFSLVIWIITSAVTSLIGLVVKLISTK
        VFSLV+WI++S+VT+LI LVVKLISTK
Subjt:  VFSLVIWIITSAVTSLIGLVVKLISTK

TrEMBL top hitse value%identityAlignment
A0A6J1CV15 uncharacterized protein LOC1110150326.6e-3774.02Show/hide
Query:  MASIFAAPPSQLNLSSRRPSLIHRAVLPSSILGIQFHSNGFPISSFRYRNNKGLKLSQRSFSITASNSSDGNSTKKENDGSKATADAQGPPFLTILAGLF
        MASIFAAPPSQLNL SRR S   RA+LP SI+G++ HS+GFP+ SFR+R+ KGL+LSQRSFSITASNSSDGNS K+E     AT DAQGPPFLTILAG F
Subjt:  MASIFAAPPSQLNLSSRRPSLIHRAVLPSSILGIQFHSNGFPISSFRYRNNKGLKLSQRSFSITASNSSDGNSTKKENDGSKATADAQGPPFLTILAGLF

Query:  VFSLVIWIITSAVTSLIGLVVKLISTK
        VFSL+IW+I+SA TSLIGLVVKLI  K
Subjt:  VFSLVIWIITSAVTSLIGLVVKLISTK

A0A6J1GPL5 uncharacterized protein LOC1114559845.6e-4480.31Show/hide
Query:  MASIFAAPPSQLNLSSRRPSLIHRAVLPSSILGIQFHSNGFPISSFRYRNNKGLKLSQRSFSITASNSSDGNSTKKENDGSKATADAQGPPFLTILAGLF
        MASIF+APPS+LNL+S RPSLIH AVLPSSI GIQ+HSN FPI SFRYRN KGL+L QRSFSITASNSSDGNS K+EN  SKA++DAQGPPFLTILAG+F
Subjt:  MASIFAAPPSQLNLSSRRPSLIHRAVLPSSILGIQFHSNGFPISSFRYRNNKGLKLSQRSFSITASNSSDGNSTKKENDGSKATADAQGPPFLTILAGLF

Query:  VFSLVIWIITSAVTSLIGLVVKLISTK
        VFSL++W+++SA TSLIGLVVKLISTK
Subjt:  VFSLVIWIITSAVTSLIGLVVKLISTK

A0A6J1H506 uncharacterized protein LOC1114606321.2e-4378.74Show/hide
Query:  MASIFAAPPSQLNLSSRRPSLIHRAVLPSSILGIQFHSNGFPISSFRYRNNKGLKLSQRSFSITASNSSDGNSTKKENDGSKATADAQGPPFLTILAGLF
        MAS+FAAPPSQL LSS RPSL H+A LP SI+G++FH NGFPI SFRY+N KGLKL QRSFSITASNSSDGNSTK++NDGSK T DAQGPPFLTILAG F
Subjt:  MASIFAAPPSQLNLSSRRPSLIHRAVLPSSILGIQFHSNGFPISSFRYRNNKGLKLSQRSFSITASNSSDGNSTKKENDGSKATADAQGPPFLTILAGLF

Query:  VFSLVIWIITSAVTSLIGLVVKLISTK
        VFSLV+WI++S+VT+LI L VKLISTK
Subjt:  VFSLVIWIITSAVTSLIGLVVKLISTK

A0A6J1JUC2 uncharacterized protein LOC1114884364.7e-4380.16Show/hide
Query:  MASIFAAPPSQLNLSSRRPSLIHRAVLPSSILGIQFHSNGFPISSFRYRNNKGLKLSQRSFSITASNSSDGNSTKKENDGSKATADAQGPPFLTILAGLF
        MASIFAAPPS+LNL+S RPSLIH AVLPSSI GIQ+HSN FPI SFRYRN KGL+LS RSFSITASNSSDGNS ++EN  SKA++DAQGPPFLTILAG+F
Subjt:  MASIFAAPPSQLNLSSRRPSLIHRAVLPSSILGIQFHSNGFPISSFRYRNNKGLKLSQRSFSITASNSSDGNSTKKENDGSKATADAQGPPFLTILAGLF

Query:  VFSLVIWIITSAVTSLIGLVVKLIST
        VFSL++W+++SA TSLIGLVVKLIST
Subjt:  VFSLVIWIITSAVTSLIGLVVKLIST

A0A6J1KVQ7 uncharacterized protein LOC1114980251.5e-4480.31Show/hide
Query:  MASIFAAPPSQLNLSSRRPSLIHRAVLPSSILGIQFHSNGFPISSFRYRNNKGLKLSQRSFSITASNSSDGNSTKKENDGSKATADAQGPPFLTILAGLF
        MAS+FAAPPSQL LSS RPSL H+A LP SI+G++FH NGFPI SFRY+N KGLKL QRSFSITASNSSDGNSTK+ENDGSK T DAQGPPFLTILAG F
Subjt:  MASIFAAPPSQLNLSSRRPSLIHRAVLPSSILGIQFHSNGFPISSFRYRNNKGLKLSQRSFSITASNSSDGNSTKKENDGSKATADAQGPPFLTILAGLF

Query:  VFSLVIWIITSAVTSLIGLVVKLISTK
        VFSLV+WI++S+VT+LI LVVKLISTK
Subjt:  VFSLVIWIITSAVTSLIGLVVKLISTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATCTTCGCCGCGCCGCCGTCTCAACTGAATCTCTCTTCTCGTCGCCCAAGCTTGATTCACAGAGCCGTTCTTCCCTCCTCCATCCTCGGCATTCAATTTCA
CTCCAACGGCTTTCCAATTTCTTCTTTTAGGTACAGGAACAACAAAGGATTGAAATTGAGCCAAAGATCTTTTTCTATAACAGCATCAAATTCCTCAGATGGAAATTCCA
CCAAGAAGGAAAATGATGGAAGTAAAGCAACTGCTGATGCCCAAGGTCCTCCATTTCTTACCATTTTGGCTGGACTTTTTGTCTTTTCCCTTGTAATTTGGATAATCACT
TCTGCTGTCACGTCACTTATAGGTTTAGTCGTTAAGCTGATCTCTACAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCATCTTCGCCGCGCCGCCGTCTCAACTGAATCTCTCTTCTCGTCGCCCAAGCTTGATTCACAGAGCCGTTCTTCCCTCCTCCATCCTCGGCATTCAATTTCA
CTCCAACGGCTTTCCAATTTCTTCTTTTAGGTACAGGAACAACAAAGGATTGAAATTGAGCCAAAGATCTTTTTCTATAACAGCATCAAATTCCTCAGATGGAAATTCCA
CCAAGAAGGAAAATGATGGAAGTAAAGCAACTGCTGATGCCCAAGGTCCTCCATTTCTTACCATTTTGGCTGGACTTTTTGTCTTTTCCCTTGTAATTTGGATAATCACT
TCTGCTGTCACGTCACTTATAGGTTTAGTCGTTAAGCTGATCTCTACAAAGTAG
Protein sequenceShow/hide protein sequence
MASIFAAPPSQLNLSSRRPSLIHRAVLPSSILGIQFHSNGFPISSFRYRNNKGLKLSQRSFSITASNSSDGNSTKKENDGSKATADAQGPPFLTILAGLFVFSLVIWIIT
SAVTSLIGLVVKLISTK