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Spg014921 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg014921
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionarabinogalactan peptide 23-like
Genome locationscaffold3:46421273..46423621
RNA-Seq ExpressionSpg014921
SyntenySpg014921
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
InterPro domainsIPR044702 - Arabinogalactan protein 23/40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025661.1 Arabinogalactan peptide 23, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-1587.3Show/hide
Query:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYFIN
        MEMKK ACAALFAAA VTA VASD+SLSPAAAPGPSSAASAALPALGSLVGASLVSFV ++ N
Subjt:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYFIN
XP_022960230.1 arabinogalactan peptide 23-like [Cucurbita moschata]6.8e-1585.71Show/hide
Query:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYFIN
        MEMKK ACAALFAAA +TA VASD+SLSPAAAPGPSSAASAALPALGSLVGASLVSFV ++ N
Subjt:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYFIN
XP_023004714.1 arabinogalactan peptide 23-like [Cucurbita maxima]1.1e-1588.89Show/hide
Query:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYFIN
        MEMKK ACAALFAAA VTA VASD+SLSPAAAPGPSSAASAALPALGSLVGASLVSFV Y+ N
Subjt:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYFIN
XP_023528634.1 arabinogalactan peptide 23 [Cucurbita pepo subsp. pepo]3.1e-1587.3Show/hide
Query:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYFIN
        MEMK  ACAALFAAAAVTA VASD+SLSPAAAPGPSSAASAALPALGSL+GASLVSFV Y +N
Subjt:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYFIN
XP_038899473.1 arabinogalactan protein 23-like [Benincasa hispida]1.1e-1587.3Show/hide
Query:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYFIN
        MEMKK ACAALFAAAAV++AVA+D+SLSPAAAPGPSSAASAALPALGSLVGASLV+FV YF+N
Subjt:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYFIN
TrEMBL top hitse value%identityAlignment
A0A1S3CDX5 arabinogalactan peptide 23-like1.1e-1078.12Show/hide
Query:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFV-VYFIN
        MEMKK ACAALFAAAAV+AAVA+D+S+SPAAAPGPSSAASAALP L    GAS+VSFV  YF+N
Subjt:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFV-VYFIN
A0A6J1F3F5 arabinogalactan peptide 23-like7.4e-1585.71Show/hide
Query:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYFIN
        MEMKK ACAALFAAA VTA VASD+SLSPAAAPGPSSAASA LPALGSLVGASLVS V Y+ N
Subjt:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYFIN
A0A6J1H8I1 arabinogalactan peptide 23-like3.3e-1585.71Show/hide
Query:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYFIN
        MEMKK ACAALFAAA +TA VASD+SLSPAAAPGPSSAASAALPALGSLVGASLVSFV ++ N
Subjt:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYFIN
A0A6J1IYE9 arabinogalactan peptide 23-like8.1e-1482.54Show/hide
Query:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYFIN
        MEMK  AC ALF AAAVTA VASD+S SPAAAPGPSSAASAALPALGSL+GASLVSFV Y +N
Subjt:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYFIN
A0A6J1KX42 arabinogalactan peptide 23-like5.1e-1688.89Show/hide
Query:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYFIN
        MEMKK ACAALFAAA VTA VASD+SLSPAAAPGPSSAASAALPALGSLVGASLVSFV Y+ N
Subjt:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYFIN
SwissProt top hitse value%identityAlignment
Q8S2W4 Arabinogalactan protein 234.0e-1065.08Show/hide
Query:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYFIN
        MEMKK AC  LFAAA++TA +A+++  +P  APGP+SAASAALPALGSLVGASLVS   Y+++
Subjt:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYFIN
Arabidopsis top hitse value%identityAlignment
AT2G41905.1 BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1)3.0e-0859.38Show/hide
Query:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGP-SSAASAALPALGSLVGASLVSFVVYFIN
        MEMKK AC  +FAAA++TA +A++     A APGP +S AS A+PALGSLVGASLVS   Y++N
Subjt:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGP-SSAASAALPALGSLVGASLVSFVVYFIN
AT3G57690.1 arabinogalactan protein 232.9e-1165.08Show/hide
Query:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYFIN
        MEMKK AC  LFAAA++TA +A+++  +P  APGP+SAASAALPALGSLVGASLVS   Y+++
Subjt:  MEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYFIN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAACGTACACGCAATCCAGCGATCAAAGGCTTCTTCGGTTCGATCTCTCTCATCTCGATCACAGGTGAGTTTTTCAGCCGAAGAAAGCCATTTTCAATTTCACC
CGCCATGGAAATGAAGAAGTTTGCCTGCGCTGCCCTCTTCGCCGCCGCTGCCGTCACCGCAGCCGTCGCCTCCGATGATTCTCTCTCTCCCGCCGCCGCCCCGGGCCCGA
GCAGCGCAGCCTCCGCCGCTCTTCCCGCCCTCGGATCGCTCGTCGGCGCCTCGCTTGTTTCCTTCGTCGTCTACTTCATCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAACGTACACGCAATCCAGCGATCAAAGGCTTCTTCGGTTCGATCTCTCTCATCTCGATCACAGGTGAGTTTTTCAGCCGAAGAAAGCCATTTTCAATTTCACC
CGCCATGGAAATGAAGAAGTTTGCCTGCGCTGCCCTCTTCGCCGCCGCTGCCGTCACCGCAGCCGTCGCCTCCGATGATTCTCTCTCTCCCGCCGCCGCCCCGGGCCCGA
GCAGCGCAGCCTCCGCCGCTCTTCCCGCCCTCGGATCGCTCGTCGGCGCCTCGCTTGTTTCCTTCGTCGTCTACTTCATCAACTGA
Protein sequenceShow/hide protein sequence
MVERTRNPAIKGFFGSISLISITGEFFSRRKPFSISPAMEMKKFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYFIN