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Spg014961 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg014961
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEthylene-responsive transcription factor
Genome locationscaffold3:42260867..42262388
RNA-Seq ExpressionSpg014961
SyntenySpg014961
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFY84954.1 integrase-type DNA-binding superfamily protein [Actinidia rufa]5.7e-3263.04Show/hide
Query:  DRRQRAPEIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM------NVSSSESQSTSLR
        D R +  +  GGD  VKYRGVRRRPWGKFAAEIRDSAR+G R+WLGTF TAEEAARAYDRAA+ MRGQLA LNFPEEY L       N+SSS S S+S+ 
Subjt:  DRRQRAPEIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM------NVSSSESQSTSLR

Query:  DDET-ERKEE--SVFEFECLDDKLLDELLDFHKEINSK
         + T ER E+   V E E LD+KLL+ELLD  ++ N K
Subjt:  DDET-ERKEE--SVFEFECLDDKLLDELLDFHKEINSK

KAG5560331.1 hypothetical protein RHGRI_003581 [Rhododendron griersonianum]4.3e-3263.91Show/hide
Query:  EIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYP-----LMNVSSSESQSTS---------L
        E +GGD+ VKYRGVRRRPWGKFAAEIRDSAR G R+WLGTF TAEEAARAYDRAA+ MRGQLA LNFPEEYP         SSS S + S          
Subjt:  EIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYP-----LMNVSSSESQSTS---------L

Query:  RDDETERKEE-SVFEFECLDDKLLDELLDFHKE
        R++  ER ++  VFEFECLDDKLL+ELL+  +E
Subjt:  RDDETERKEE-SVFEFECLDDKLLDELLDFHKE

PON62613.1 AP2/ERF transcription factor [Parasponia andersonii]8.8e-3361.87Show/hide
Query:  GTNTDMDDRRQRAPEIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMN-----VSSSES
        GTN D ++          G + V+YRGVRRRPWGKFAAEIRDS R G R+WLGTF TAEEAARAYDRAAF MRG  A LNFP EYPL        SS+ S
Subjt:  GTNTDMDDRRQRAPEIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMN-----VSSSES

Query:  QSTSLRDDETERKEESVFEFECLDDKLLDELLDFHKEIN
         S++ R+ ET+++ E VFEFE LDDKLLDELLDF K+ N
Subjt:  QSTSLRDDETERKEESVFEFECLDDKLLDELLDFHKEIN

XP_030498307.1 ethylene-responsive transcription factor ERF098-like [Cannabis sativa]1.5e-3265.87Show/hide
Query:  DRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNV-----------SSSESQSTSLRDDETERK
        D+ VKYRGVRRRPWGKFAAEIRDS R G RIWLGTF TAEEAARAYDRAAF MRG  A LNFP +YP ++V           SSS S S+++R+ ET+++
Subjt:  DRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNV-----------SSSESQSTSLRDDETERK

Query:  EESVFEFECLDDKLLDELLDFHKEIN
        E  VFEFE LDDKLLDELLDF  + N
Subjt:  EESVFEFECLDDKLLDELLDFHKEIN

XP_038896382.1 ethylene-responsive transcription factor 14-like [Benincasa hispida]4.5e-5381.43Show/hide
Query:  MDDRRQRAPEID---------GGDRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSSESQ
        M+D RQR PEI+         GG+RCVKYRGVRRRPWGKFAAEIRDS RRG RIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM VSS ESQ
Subjt:  MDDRRQRAPEID---------GGDRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSSESQ

Query:  STSLRDDETERKEESVFEFECLDDKLLDELLDFHKEINSK
        S+SL++DETERKEE+V EFECLD+ LLDELLDF KEINSK
Subjt:  STSLRDDETERKEESVFEFECLDDKLLDELLDFHKEINSK

TrEMBL top hitse value%identityAlignment
A0A2P5CNI8 AP2/ERF transcription factor4.2e-3361.87Show/hide
Query:  GTNTDMDDRRQRAPEIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMN-----VSSSES
        GTN D ++          G + V+YRGVRRRPWGKFAAEIRDS R G R+WLGTF TAEEAARAYDRAAF MRG  A LNFP EYPL        SS+ S
Subjt:  GTNTDMDDRRQRAPEIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMN-----VSSSES

Query:  QSTSLRDDETERKEESVFEFECLDDKLLDELLDFHKEIN
         S++ R+ ET+++ E VFEFE LDDKLLDELLDF K+ N
Subjt:  QSTSLRDDETERKEESVFEFECLDDKLLDELLDFHKEIN

A0A2P5E849 AP2/ERF transcription factor4.7e-3263.57Show/hide
Query:  GDRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPL-------------MNVSSSESQSTSLRDDET
        G + V+YRGVRRRPWGKFAAEIRDS R G R+WLGTF TAEEAARAYDRAAF MRG  A LNFP EYPL              + SS+ S S++ R+ ET
Subjt:  GDRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPL-------------MNVSSSESQSTSLRDDET

Query:  ERKEESVFEFECLDDKLLDELLDFHKEIN
        +++ E VFEFE LDDKLLDELLDF K+ N
Subjt:  ERKEESVFEFECLDDKLLDELLDFHKEIN

A0A7J0EEM4 Integrase-type DNA-binding superfamily protein2.7e-3263.04Show/hide
Query:  DRRQRAPEIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM------NVSSSESQSTSLR
        D R +  +  GGD  VKYRGVRRRPWGKFAAEIRDSAR+G R+WLGTF TAEEAARAYDRAA+ MRGQLA LNFPEEY L       N+SSS S S+S+ 
Subjt:  DRRQRAPEIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM------NVSSSESQSTSLR

Query:  DDET-ERKEE--SVFEFECLDDKLLDELLDFHKEINSK
         + T ER E+   V E E LD+KLL+ELLD  ++ N K
Subjt:  DDET-ERKEE--SVFEFECLDDKLLDELLDFHKEINSK

A0A7J6GXW5 AP2/ERF domain-containing protein7.2e-3365.87Show/hide
Query:  DRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNV-----------SSSESQSTSLRDDETERK
        D+ VKYRGVRRRPWGKFAAEIRDS R G RIWLGTF TAEEAARAYDRAAF MRG  A LNFP +YP ++V           SSS S S+++R+ ET+++
Subjt:  DRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNV-----------SSSESQSTSLRDDETERK

Query:  EESVFEFECLDDKLLDELLDFHKEIN
        E  VFEFE LDDKLLDELLDF  + N
Subjt:  EESVFEFECLDDKLLDELLDFHKEIN

A0A803PGP0 Uncharacterized protein7.2e-3365.87Show/hide
Query:  DRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNV-----------SSSESQSTSLRDDETERK
        D+ VKYRGVRRRPWGKFAAEIRDS R G RIWLGTF TAEEAARAYDRAAF MRG  A LNFP +YP ++V           SSS S S+++R+ ET+++
Subjt:  DRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNV-----------SSSESQSTSLRDDETERK

Query:  EESVFEFECLDDKLLDELLDFHKEIN
        E  VFEFE LDDKLLDELLDF  + N
Subjt:  EESVFEFECLDDKLLDELLDFHKEIN

SwissProt top hitse value%identityAlignment
O04681 Pathogenesis-related genes transcriptional activator PTI55.0e-2360.58Show/hide
Query:  KYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVS------SSESQSTSLRDD----ETERKEESVF
        KYRGVRRRPWGK+AAEIRDSAR G R+WLGTFETAEEAA AYDRAAFRMRG  A LNFP E    +VS       S S +T+   D    E       VF
Subjt:  KYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVS------SSESQSTSLRDD----ETERKEESVF

Query:  EFEC
        E  C
Subjt:  EFEC

P93822 Ethylene-responsive transcription factor 142.7e-2954.26Show/hide
Query:  MDDRRQRAPEIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSSESQSTSLRDDET
        MD   + +    GG    KYRGVRRRPWGK+AAEIRDS + G R+WLGTF+TAE+AARAYDRAA+ MRG+ A LNFP EY +   SSS + ++S      
Subjt:  MDDRRQRAPEIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSSESQSTSLRDDET

Query:  ERKEESVFEFECLDDKLLDELLDFHKEIN
            + VFEFE LDD +LDELL++ +  N
Subjt:  ERKEESVFEFECLDDKLLDELLDFHKEIN

Q9LSX0 Ethylene-responsive transcription factor ERF0962.0e-2760.91Show/hide
Query:  KYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSSESQSTSLRDDETERKEES-----VFEFECL
        KYRGVRRRPWGK+AAEIRDS + G R+WLGTF+TAEEAARAYD+AA+ MRGQ A LNFP EY   N+ S  S ST++    +     S     VFEFE L
Subjt:  KYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSSESQSTSLRDDETERKEES-----VFEFECL

Query:  DDKLLDELLD
        DD +L+ELL+
Subjt:  DDKLLDELLD

Q9LTC5 Ethylene-responsive transcription factor ERF0981.9e-3060.5Show/hide
Query:  DRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEY----------PLMNVSSSESQSTSLRDDETERKE
        D+  ++RGVRRRPWGKFAAEIRD +R G R+WLGTFETAEEAARAYDRAAF +RG LA LNFP EY          P    SSS S S S   + + + +
Subjt:  DRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEY----------PLMNVSSSESQSTSLRDDETERKE

Query:  ESVFEFECLDDKLLDELLD
          VFEFE LDDK+L+ELLD
Subjt:  ESVFEFECLDDKLLDELLD

Q9LTC6 Ethylene-responsive transcription factor ERF0952.3e-2857.98Show/hide
Query:  VKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM-------NVSSSESQSTSLRDDETERKEESVFEF
        +KYRGVR+RPWGK+AAEIRDSAR G R+WLGTF TAE+AARAYDRAAF MRGQ A LNFP EY +M       + ++  S S+  R          V EF
Subjt:  VKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM-------NVSSSESQSTSLRDDETERKEESVFEF

Query:  ECLDDKLLDELLDFHKEIN
        E LDD LL+ELLD+ +  N
Subjt:  ECLDDKLLDELLDFHKEIN

Arabidopsis top hitse value%identityAlignment
AT1G04370.1 Ethylene-responsive element binding factor 141.9e-3054.26Show/hide
Query:  MDDRRQRAPEIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSSESQSTSLRDDET
        MD   + +    GG    KYRGVRRRPWGK+AAEIRDS + G R+WLGTF+TAE+AARAYDRAA+ MRG+ A LNFP EY +   SSS + ++S      
Subjt:  MDDRRQRAPEIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSSESQSTSLRDDET

Query:  ERKEESVFEFECLDDKLLDELLDFHKEIN
            + VFEFE LDD +LDELL++ +  N
Subjt:  ERKEESVFEFECLDDKLLDELLDFHKEIN

AT2G31230.1 ethylene-responsive element binding factor 157.4e-2261.18Show/hide
Query:  GGDRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSSESQSTSLRD
        G D    YRGVR+RPWGKFAAEIRDS R GIR+WLGTF+ AEEAA AYD+AAF  +G LATLNFP E  ++  S  + ++ +L D
Subjt:  GGDRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSSESQSTSLRD

AT3G23220.1 Integrase-type DNA-binding superfamily protein1.6e-2957.98Show/hide
Query:  VKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM-------NVSSSESQSTSLRDDETERKEESVFEF
        +KYRGVR+RPWGK+AAEIRDSAR G R+WLGTF TAE+AARAYDRAAF MRGQ A LNFP EY +M       + ++  S S+  R          V EF
Subjt:  VKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM-------NVSSSESQSTSLRDDETERKEESVFEF

Query:  ECLDDKLLDELLDFHKEIN
        E LDD LL+ELLD+ +  N
Subjt:  ECLDDKLLDELLDFHKEIN

AT3G23230.1 Integrase-type DNA-binding superfamily protein1.3e-3160.5Show/hide
Query:  DRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEY----------PLMNVSSSESQSTSLRDDETERKE
        D+  ++RGVRRRPWGKFAAEIRD +R G R+WLGTFETAEEAARAYDRAAF +RG LA LNFP EY          P    SSS S S S   + + + +
Subjt:  DRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEY----------PLMNVSSSESQSTSLRDDETERKE

Query:  ESVFEFECLDDKLLDELLD
          VFEFE LDDK+L+ELLD
Subjt:  ESVFEFECLDDKLLDELLD

AT5G43410.1 Integrase-type DNA-binding superfamily protein1.4e-2860.91Show/hide
Query:  KYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSSESQSTSLRDDETERKEES-----VFEFECL
        KYRGVRRRPWGK+AAEIRDS + G R+WLGTF+TAEEAARAYD+AA+ MRGQ A LNFP EY   N+ S  S ST++    +     S     VFEFE L
Subjt:  KYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSSESQSTSLRDDETERKEES-----VFEFECL

Query:  DDKLLDELLD
        DD +L+ELL+
Subjt:  DDKLLDELLD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTAGACGAAGATTCAAAGAAATGGAGTGGCGATTTTGAAGTCAAGAAGGGTAAATTTGGGAAGCTTTTGGGCACAAATACCGATATGGACGATCGCCGCCAGAGAGCACC
GGAGATCGACGGCGGAGATAGGTGTGTGAAGTACAGGGGAGTGCGGCGACGGCCGTGGGGGAAGTTCGCGGCGGAGATTCGGGACTCGGCGCGGCGGGGGATTCGGATTT
GGCTGGGGACATTCGAGACGGCTGAAGAAGCTGCGAGAGCGTACGATCGAGCCGCGTTCAGAATGAGAGGTCAATTGGCCACTCTGAATTTTCCGGAGGAGTATCCATTG
ATGAACGTTTCGAGCTCTGAATCTCAATCGACTTCATTGCGAGATGATGAAACAGAGAGAAAAGAGGAATCGGTTTTTGAATTTGAGTGTTTGGATGATAAATTGTTGGA
TGAGCTTCTCGACTTTCACAAGGAAATCAATTCTAAGTGA
mRNA sequenceShow/hide mRNA sequence
GTAGACGAAGATTCAAAGAAATGGAGTGGCGATTTTGAAGTCAAGAAGGGTAAATTTGGGAAGCTTTTGGGCACAAATACCGATATGGACGATCGCCGCCAGAGAGCACC
GGAGATCGACGGCGGAGATAGGTGTGTGAAGTACAGGGGAGTGCGGCGACGGCCGTGGGGGAAGTTCGCGGCGGAGATTCGGGACTCGGCGCGGCGGGGGATTCGGATTT
GGCTGGGGACATTCGAGACGGCTGAAGAAGCTGCGAGAGCGTACGATCGAGCCGCGTTCAGAATGAGAGGTCAATTGGCCACTCTGAATTTTCCGGAGGAGTATCCATTG
ATGAACGTTTCGAGCTCTGAATCTCAATCGACTTCATTGCGAGATGATGAAACAGAGAGAAAAGAGGAATCGGTTTTTGAATTTGAGTGTTTGGATGATAAATTGTTGGA
TGAGCTTCTCGACTTTCACAAGGAAATCAATTCTAAGTGA
Protein sequenceShow/hide protein sequence
VDEDSKKWSGDFEVKKGKFGKLLGTNTDMDDRRQRAPEIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGIRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPL
MNVSSSESQSTSLRDDETERKEESVFEFECLDDKLLDELLDFHKEINSK