; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg014982 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg014982
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein THYLAKOID ASSEMBLY 8, chloroplastic
Genome locationscaffold3:48263985..48264674
RNA-Seq ExpressionSpg014982
SyntenySpg014982
Gene Ontology termsGO:0000373 - Group II intron splicing (biological process)
GO:0009658 - chloroplast organization (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044190 - Protein THYLAKOID ASSEMBLY 8-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014066.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]7.8e-9985.53Show/hide
Query:  MAFSLHSTFLKSQFAIPIPISAATAAAAAVSFPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQD
        MAFSLHSTFLKSQ  IPIPISA   A   VS PVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAE+SDPTKL+QVLS TLSRLLKADLVA LKELLRQD
Subjt:  MAFSLHSTFLKSQFAIPIPISAATAAAAAVSFPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQD

Query:  RCPLALEVFTVVRSEYGADLGMYAEVAAALSRNGAAEEIDRLVCDLDDGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYMVR
        RC LALEVF VVRSEYGADLGMYAEVAAALSRNGA EEIDRLVCDL+D +  IQCDDKGLIKLIKAV+GGDRRESTVRIYRMM+RSGWGS  KAD+Y VR
Subjt:  RCPLALEVFTVVRSEYGADLGMYAEVAAALSRNGAAEEIDRLVCDLDDGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYMVR

Query:  VLSKGLRRLGEVELADEINREFQDLVGT
        VLSKGLRRLGE+E+ADE+N +FQDLVG+
Subjt:  VLSKGLRRLGEVELADEINREFQDLVGT

XP_022954347.1 protein THYLAKOID ASSEMBLY 8, chloroplastic [Cucurbita moschata]3.5e-9985.96Show/hide
Query:  MAFSLHSTFLKSQFAIPIPISAATAAAAAVSFPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQD
        MAFSLHSTFLKSQ  IPIPISA  AA   VS PVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAE+SDPTKL+QVLS TLSRLLKADLVA LKELLRQD
Subjt:  MAFSLHSTFLKSQFAIPIPISAATAAAAAVSFPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQD

Query:  RCPLALEVFTVVRSEYGADLGMYAEVAAALSRNGAAEEIDRLVCDLDDGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYMVR
        RC LALEVF VVRSEYGADLGMYAEVAAALSRNGA EEIDRLVCDL+D +  IQCDDKGLIKLIKAV+GGDRRESTVRIYRMM+RSGWGS  KAD+Y VR
Subjt:  RCPLALEVFTVVRSEYGADLGMYAEVAAALSRNGAAEEIDRLVCDLDDGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYMVR

Query:  VLSKGLRRLGEVELADEINREFQDLVGT
        VLSKGLRRLGE+E+ADE+N +FQDLVG+
Subjt:  VLSKGLRRLGEVELADEINREFQDLVGT

XP_022992386.1 protein THYLAKOID ASSEMBLY 8, chloroplastic [Cucurbita maxima]4.5e-9985.96Show/hide
Query:  MAFSLHSTFLKSQFAIPIPISAATAAAAAVSFPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQD
        MAFSLHSTFLKSQ  IPIPISA   A   VS PVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAE+SDPTKL+QVLS TLSRLLKADLVA LKELLRQD
Subjt:  MAFSLHSTFLKSQFAIPIPISAATAAAAAVSFPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQD

Query:  RCPLALEVFTVVRSEYGADLGMYAEVAAALSRNGAAEEIDRLVCDLDDGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYMVR
        RC LALEVF VVRSEYG DLGMYAEVAAALSRNGA EEIDRLVCDL+D +  IQCDDKGLIKLIKAV+GGDRRESTVRIYRMM+RSGWGS  KAD+YMVR
Subjt:  RCPLALEVFTVVRSEYGADLGMYAEVAAALSRNGAAEEIDRLVCDLDDGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYMVR

Query:  VLSKGLRRLGEVELADEINREFQDLVGT
        VLSKGLRRLGE+E+ADEIN +FQDLVG+
Subjt:  VLSKGLRRLGEVELADEINREFQDLVGT

XP_023522652.1 protein THYLAKOID ASSEMBLY 8, chloroplastic-like [Cucurbita pepo subsp. pepo]2.0e-9985.96Show/hide
Query:  MAFSLHSTFLKSQFAIPIPISAATAAAAAVSFPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQD
        MAFSLHSTFLKSQ  IPIPISA   A   VS PVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAE+SDPTKL+QVLS TLSRLLKADLVA LKELLRQD
Subjt:  MAFSLHSTFLKSQFAIPIPISAATAAAAAVSFPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQD

Query:  RCPLALEVFTVVRSEYGADLGMYAEVAAALSRNGAAEEIDRLVCDLDDGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYMVR
        RC LALEVF VVRSEYGADLGMYAEVAAALSRNGAAEEIDRLVCDL+D +  IQCDDKGLIKLIKAV+GGDRRESTVRIYRMM+RSGWGS  KAD+Y VR
Subjt:  RCPLALEVFTVVRSEYGADLGMYAEVAAALSRNGAAEEIDRLVCDLDDGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYMVR

Query:  VLSKGLRRLGEVELADEINREFQDLVGT
        VLSKGLRRLGE+E+ADE+N +FQDLVG+
Subjt:  VLSKGLRRLGEVELADEINREFQDLVGT

XP_038898717.1 protein THYLAKOID ASSEMBLY 8, chloroplastic [Benincasa hispida]2.0e-9986.46Show/hide
Query:  MAFSLHSTFLKSQFAIPIPISAATAAAAAVSFPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQD
        MA S+HSTFLKSQ +IPIP+SA  AAA AVS PVRCGPRDNRGPLVKGRTLS EAIQAIQSLKRAERSDPTKLQQVLS TLSRLLKADLVA+LKELLRQD
Subjt:  MAFSLHSTFLKSQFAIPIPISAATAAAAAVSFPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQD

Query:  RCPLALEVFTVVRSEYGADLGMYAEVAAALSRNGAAEEIDRLVCDLDDGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYMVR
        RC LALEVF V+RSEYGADLGMYAEVAAALSRNGAAEEIDRLVCDLD G+  IQ DDKGLIKLIKAV+ GDRRESTVRIYRMMRR+GWGS  KAD+Y+VR
Subjt:  RCPLALEVFTVVRSEYGADLGMYAEVAAALSRNGAAEEIDRLVCDLDDGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYMVR

Query:  VLSKGLRRLGEVELADEINREFQDLVGTL
        VLSKGLRR GE+ELADEINREFQDLVG +
Subjt:  VLSKGLRRLGEVELADEINREFQDLVGTL

TrEMBL top hitse value%identityAlignment
A0A0A0K6N6 Uncharacterized protein2.0e-9281.74Show/hide
Query:  MAFSLHSTFLKSQFAIPIPISAATAAAAAVSFPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQD
        MA SLHSTFLKSQ +IPIP S AT +  AVSF VRCGPRDNRGPLVKGRTLS EAIQAIQSLKRAERSDPTKLQQVLS TLSRLLKADLVA LKELLRQ+
Subjt:  MAFSLHSTFLKSQFAIPIPISAATAAAAAVSFPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQD

Query:  RCPLALEVFTVVRSEYGADLGMYAEVAAALSRNGAAEEIDRLVCDLDDGESKIQC--DDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYM
        RC LALEVF V++SEY A+LG+YAEVAAALSRNGAAEEIDRLV DLD G+  I+   DDKGLIKLIKAV+ G+RRESTVRIYRMMRR GWGS  KAD+YM
Subjt:  RCPLALEVFTVVRSEYGADLGMYAEVAAALSRNGAAEEIDRLVCDLDDGESKIQC--DDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYM

Query:  VRVLSKGLRRLGEVELADEINREFQDLVGT
        ++VLSKGLRRLGE+ELADEINREF+DLVG+
Subjt:  VRVLSKGLRRLGEVELADEINREFQDLVGT

A0A1S3CGD3 uncharacterized protein LOC1035005978.1e-9482.68Show/hide
Query:  MAFSLHSTFLKSQFAIPIPISAATAAAAAVSFPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQD
        MA SLHSTFLKSQ +IPIP S AT AA AVSF VRCGPRDNRGPLVKGRTLS EAIQAIQSLKRAERSDPTKLQQVLS TLSRLLKADLVA LKELLRQ+
Subjt:  MAFSLHSTFLKSQFAIPIPISAATAAAAAVSFPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQD

Query:  RCPLALEVFTVVRSEYGADLGMYAEVAAALSRNGAAEEIDRLVCDLD--DGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYM
        RC LALEVF V+RSEY A+LG+YAEVAAALSRNGAAEEIDRLVCDLD  DG  +   DDKGLIKLIKAV+ G+RRESTVRIYRMMRR+GWGS  K D+YM
Subjt:  RCPLALEVFTVVRSEYGADLGMYAEVAAALSRNGAAEEIDRLVCDLD--DGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYM

Query:  VRVLSKGLRRLGEVELADEINREFQDLVGTL
        ++V+SKGLRR+GE+ELADEINREFQDLVG+L
Subjt:  VRVLSKGLRRLGEVELADEINREFQDLVGTL

A0A5A7V0E2 Uncharacterized protein1.2e-9282.25Show/hide
Query:  MAFSLHSTFLKSQFAIPIPISAATAAAAAVSFPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQD
        MA SL STFLKSQ +IPIP S AT AA AVSF VRCGPRDNRGPLVKGRTLS EAIQAIQSLKRAERSDPTKLQQVLS TLSRLLKADLVA LKELLRQ+
Subjt:  MAFSLHSTFLKSQFAIPIPISAATAAAAAVSFPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQD

Query:  RCPLALEVFTVVRSEYGADLGMYAEVAAALSRNGAAEEIDRLVCDLD--DGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYM
        RC LALEVF V+RSEY A+LG+YAEVAAALSRNGAAEEIDRLVCDLD  DG  +   DDKGLIKLIKAV+ G+RRESTVRIYRMMRR+GWGS  K D+YM
Subjt:  RCPLALEVFTVVRSEYGADLGMYAEVAAALSRNGAAEEIDRLVCDLD--DGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYM

Query:  VRVLSKGLRRLGEVELADEINREFQDLVGTL
        ++V+SKGLRR+GE+ELADEINREFQDLVG+L
Subjt:  VRVLSKGLRRLGEVELADEINREFQDLVGTL

A0A6J1GQS0 protein THYLAKOID ASSEMBLY 8, chloroplastic1.7e-9985.96Show/hide
Query:  MAFSLHSTFLKSQFAIPIPISAATAAAAAVSFPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQD
        MAFSLHSTFLKSQ  IPIPISA  AA   VS PVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAE+SDPTKL+QVLS TLSRLLKADLVA LKELLRQD
Subjt:  MAFSLHSTFLKSQFAIPIPISAATAAAAAVSFPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQD

Query:  RCPLALEVFTVVRSEYGADLGMYAEVAAALSRNGAAEEIDRLVCDLDDGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYMVR
        RC LALEVF VVRSEYGADLGMYAEVAAALSRNGA EEIDRLVCDL+D +  IQCDDKGLIKLIKAV+GGDRRESTVRIYRMM+RSGWGS  KAD+Y VR
Subjt:  RCPLALEVFTVVRSEYGADLGMYAEVAAALSRNGAAEEIDRLVCDLDDGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYMVR

Query:  VLSKGLRRLGEVELADEINREFQDLVGT
        VLSKGLRRLGE+E+ADE+N +FQDLVG+
Subjt:  VLSKGLRRLGEVELADEINREFQDLVGT

A0A6J1JTE8 protein THYLAKOID ASSEMBLY 8, chloroplastic2.2e-9985.96Show/hide
Query:  MAFSLHSTFLKSQFAIPIPISAATAAAAAVSFPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQD
        MAFSLHSTFLKSQ  IPIPISA   A   VS PVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAE+SDPTKL+QVLS TLSRLLKADLVA LKELLRQD
Subjt:  MAFSLHSTFLKSQFAIPIPISAATAAAAAVSFPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQD

Query:  RCPLALEVFTVVRSEYGADLGMYAEVAAALSRNGAAEEIDRLVCDLDDGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYMVR
        RC LALEVF VVRSEYG DLGMYAEVAAALSRNGA EEIDRLVCDL+D +  IQCDDKGLIKLIKAV+GGDRRESTVRIYRMM+RSGWGS  KAD+YMVR
Subjt:  RCPLALEVFTVVRSEYGADLGMYAEVAAALSRNGAAEEIDRLVCDLDDGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYMVR

Query:  VLSKGLRRLGEVELADEINREFQDLVGT
        VLSKGLRRLGE+E+ADEIN +FQDLVG+
Subjt:  VLSKGLRRLGEVELADEINREFQDLVGT

SwissProt top hitse value%identityAlignment
Q1PFH7 Pentatricopeptide repeat-containing protein At1g623501.9e-0727.68Show/hide
Query:  LSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQDRCPLALEVFTVVRSE--YGADLGMYAEVAAALSRNGAAEEIDRLVCDLDD
        +S E + A + LKR + +   +L + + + +SRLLK+DLV+ L E  RQ++  L ++++ VVR E  Y  D+  Y ++   L+RN   +E  ++  DL  
Subjt:  LSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQDRCPLALEVFTVVRSE--YGADLGMYAEVAAALSRNGAAEEIDRLVCDLDD

Query:  GESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYMVRVLSKGLRRLGEVELADEINREFQDL
         + ++  D      L++  +  +     +R+Y  MR     S  +      RV+ KGL  +   EL +++  +F +L
Subjt:  GESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYMVRVLSKGLRRLGEVELADEINREFQDL

Q9LVW6 Protein THYLAKOID ASSEMBLY 8, chloroplastic1.4e-4755.85Show/hide
Query:  VRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQDRCPLALEVFTVVRSEY-GADLGMYAEVAAALSR
        +RCGPRDNRGPL+KGR LSTEAIQ+IQSLKRA R+  +    +    L RL+K+DL++ L+ELLRQD C LA+ V + +R+EY   DL +YA++  AL+R
Subjt:  VRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQDRCPLALEVFTVVRSEY-GADLGMYAEVAAALSR

Query:  NGAAEEIDRLVCDLDDGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSAS-KADEYMVRVLSKGLRRLGEVELADEIN
        N   +EIDRL+ ++D  + +   DDK L KLI+AVVG +RRES VR+Y +MR SGWGS S +ADEY+  VLSKGL RLGE +LA +++
Subjt:  NGAAEEIDRLVCDLDDGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSAS-KADEYMVRVLSKGLRRLGEVELADEIN

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic8.6e-0827.81Show/hide
Query:  RGPLVKGRTL-STEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQDRCPLALEVFTVVRSE--YGADLGMYAEVAAALSRNGAAEE
        RGPL +G+ L   EA+  I  LKR  + D  KL + +   + RLLK D++A + EL RQ+   LA+++F V++ +  Y  D+ MY ++  +L+++   +E
Subjt:  RGPLVKGRTL-STEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQDRCPLALEVFTVVRSE--YGADLGMYAEVAAALSRNGAAEE

Query:  IDRLVCDLDDGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYMVRVLSKGLRRLGEVELADEINREFQDL
           L   +   +  +  D +   ++I+  +        + +Y  M +    S    +E   RVL KGL  L    L +++ ++F++L
Subjt:  IDRLVCDLDDGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYMVRVLSKGLRRLGEVELADEINREFQDL

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein1.4e-0827.68Show/hide
Query:  LSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQDRCPLALEVFTVVRSE--YGADLGMYAEVAAALSRNGAAEEIDRLVCDLDD
        +S E + A + LKR + +   +L + + + +SRLLK+DLV+ L E  RQ++  L ++++ VVR E  Y  D+  Y ++   L+RN   +E  ++  DL  
Subjt:  LSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQDRCPLALEVFTVVRSE--YGADLGMYAEVAAALSRNGAAEEIDRLVCDLDD

Query:  GESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYMVRVLSKGLRRLGEVELADEINREFQDL
         + ++  D      L++  +  +     +R+Y  MR     S  +      RV+ KGL  +   EL +++  +F +L
Subjt:  GESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYMVRVLSKGLRRLGEVELADEINREFQDL

AT3G27750.1 FUNCTIONS IN: molecular_function unknown1.0e-4855.85Show/hide
Query:  VRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQDRCPLALEVFTVVRSEY-GADLGMYAEVAAALSR
        +RCGPRDNRGPL+KGR LSTEAIQ+IQSLKRA R+  +    +    L RL+K+DL++ L+ELLRQD C LA+ V + +R+EY   DL +YA++  AL+R
Subjt:  VRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQDRCPLALEVFTVVRSEY-GADLGMYAEVAAALSR

Query:  NGAAEEIDRLVCDLDDGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSAS-KADEYMVRVLSKGLRRLGEVELADEIN
        N   +EIDRL+ ++D  + +   DDK L KLI+AVVG +RRES VR+Y +MR SGWGS S +ADEY+  VLSKGL RLGE +LA +++
Subjt:  NGAAEEIDRLVCDLDDGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSAS-KADEYMVRVLSKGLRRLGEVELADEIN

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein6.1e-0927.81Show/hide
Query:  RGPLVKGRTL-STEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQDRCPLALEVFTVVRSE--YGADLGMYAEVAAALSRNGAAEE
        RGPL +G+ L   EA+  I  LKR  + D  KL + +   + RLLK D++A + EL RQ+   LA+++F V++ +  Y  D+ MY ++  +L+++   +E
Subjt:  RGPLVKGRTL-STEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQDRCPLALEVFTVVRSE--YGADLGMYAEVAAALSRNGAAEE

Query:  IDRLVCDLDDGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYMVRVLSKGLRRLGEVELADEINREFQDL
           L   +   +  +  D +   ++I+  +        + +Y  M +    S    +E   RVL KGL  L    L +++ ++F++L
Subjt:  IDRLVCDLDDGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYMVRVLSKGLRRLGEVELADEINREFQDL

AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain2.3e-1631.53Show/hide
Query:  NRGPLVKGRTLSTEAIQAIQSLKRAE--------------RSDPTKLQQVLSNTLSRLLKADLVAALKELLRQDRCPLALEVFTVVRSE--YGADLGMYA
        NR PL +GR LS EAIQA+Q+LKRA                S    L +V+ +   RLLK D+VA L+ELLRQ+ C LAL+VF  +R E  Y   + MY 
Subjt:  NRGPLVKGRTLSTEAIQAIQSLKRAE--------------RSDPTKLQQVLSNTLSRLLKADLVAALKELLRQDRCPLALEVFTVVRSE--YGADLGMYA

Query:  EVAAALSRNGAAEEIDRLVCDLDDGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYMVRVLSKGLRRLGEVELADEINREFQD
        ++   ++ N   EE++ L   +   E  +  + +    L+  ++     +  +  Y  M+  G+    + D    RVL  GL   GE+ L+  + ++  +
Subjt:  EVAAALSRNGAAEEIDRLVCDLDDGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYMVRVLSKGLRRLGEVELADEINREFQD

Query:  LVG
          G
Subjt:  LVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTTTCTCTTCACTCTACATTTCTCAAATCCCAATTCGCAATTCCGATTCCCATCTCCGCCGCAACCGCCGCCGCCGCCGCCGTCTCTTTTCCGGTACGCTGCGG
CCCACGCGACAACCGAGGGCCGCTAGTTAAAGGCAGAACCCTAAGCACCGAGGCCATTCAAGCCATTCAATCCCTAAAACGGGCGGAAAGATCCGACCCGACGAAGCTCC
AACAAGTCCTCTCTAATACTCTCTCCCGATTGCTCAAAGCCGACCTCGTCGCCGCCCTGAAGGAGCTTCTCCGGCAGGACCGGTGTCCCCTCGCCTTGGAGGTTTTCACC
GTCGTCCGATCGGAGTACGGCGCCGATTTAGGGATGTACGCGGAGGTCGCGGCGGCGCTGTCGAGGAACGGAGCGGCGGAGGAAATCGACCGGCTGGTGTGCGATTTGGA
CGACGGAGAGAGTAAAATCCAGTGCGATGACAAGGGTTTGATTAAGTTGATCAAGGCGGTGGTTGGTGGAGATCGAAGGGAATCGACGGTCAGGATTTATCGGATGATGA
GGAGGAGCGGTTGGGGGTCCGCCAGTAAAGCTGATGAGTATATGGTTAGGGTTTTGAGCAAGGGTTTAAGGAGACTTGGGGAAGTGGAATTGGCTGATGAGATCAATAGG
GAATTTCAAGATTTAGTGGGGACTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTTTCTCTTCACTCTACATTTCTCAAATCCCAATTCGCAATTCCGATTCCCATCTCCGCCGCAACCGCCGCCGCCGCCGCCGTCTCTTTTCCGGTACGCTGCGG
CCCACGCGACAACCGAGGGCCGCTAGTTAAAGGCAGAACCCTAAGCACCGAGGCCATTCAAGCCATTCAATCCCTAAAACGGGCGGAAAGATCCGACCCGACGAAGCTCC
AACAAGTCCTCTCTAATACTCTCTCCCGATTGCTCAAAGCCGACCTCGTCGCCGCCCTGAAGGAGCTTCTCCGGCAGGACCGGTGTCCCCTCGCCTTGGAGGTTTTCACC
GTCGTCCGATCGGAGTACGGCGCCGATTTAGGGATGTACGCGGAGGTCGCGGCGGCGCTGTCGAGGAACGGAGCGGCGGAGGAAATCGACCGGCTGGTGTGCGATTTGGA
CGACGGAGAGAGTAAAATCCAGTGCGATGACAAGGGTTTGATTAAGTTGATCAAGGCGGTGGTTGGTGGAGATCGAAGGGAATCGACGGTCAGGATTTATCGGATGATGA
GGAGGAGCGGTTGGGGGTCCGCCAGTAAAGCTGATGAGTATATGGTTAGGGTTTTGAGCAAGGGTTTAAGGAGACTTGGGGAAGTGGAATTGGCTGATGAGATCAATAGG
GAATTTCAAGATTTAGTGGGGACTTTGTGA
Protein sequenceShow/hide protein sequence
MAFSLHSTFLKSQFAIPIPISAATAAAAAVSFPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSNTLSRLLKADLVAALKELLRQDRCPLALEVFT
VVRSEYGADLGMYAEVAAALSRNGAAEEIDRLVCDLDDGESKIQCDDKGLIKLIKAVVGGDRRESTVRIYRMMRRSGWGSASKADEYMVRVLSKGLRRLGEVELADEINR
EFQDLVGTL