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Spg015004 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015004
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationscaffold3:32422917..32423521
RNA-Seq ExpressionSpg015004
SyntenySpg015004
Gene Ontology termsNA
InterPro domainsIPR033326 - E3 ubiquitin-protein ligase BAH1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136542.2 probable E3 ubiquitin-protein ligase BAH1-like isoform X1 [Cucumis sativus]5.8e-2850Show/hide
Query:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM
        CDQL+FSELMREASDIAGCF+TR                                                          VH+S+NGKNFKL++RAEHM
Subjt:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM

Query:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEFSIQLSVDVDVAPTMTLKL
        ELLQSPWLIELGAFCLNFKGS  GDYPS FS   S +VD APTMTL L
Subjt:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEFSIQLSVDVDVAPTMTLKL

XP_008442983.1 PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like isoform X1 [Cucumis melo]2.0e-2850.68Show/hide
Query:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM
        CDQL+FSELMREASDIAGCF+TR                                                          VH+S+NGKNFKLK+RAEHM
Subjt:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM

Query:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEFSIQLSVDVDVAPTMTLKL
        ELLQSPWLIELGAFCLNFKGS+ GDYPS FS     +VDVAPTMTL L
Subjt:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEFSIQLSVDVDVAPTMTLKL

XP_008442986.1 PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like isoform X2 [Cucumis melo]2.0e-2850.68Show/hide
Query:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM
        CDQL+FSELMREASDIAGCF+TR                                                          VH+S+NGKNFKLK+RAEHM
Subjt:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM

Query:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEFSIQLSVDVDVAPTMTLKL
        ELLQSPWLIELGAFCLNFKGS+ GDYPS FS     +VDVAPTMTL L
Subjt:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEFSIQLSVDVDVAPTMTLKL

XP_031739330.1 probable E3 ubiquitin-protein ligase BAH1-like isoform X2 [Cucumis sativus]5.8e-2850Show/hide
Query:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM
        CDQL+FSELMREASDIAGCF+TR                                                          VH+S+NGKNFKL++RAEHM
Subjt:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM

Query:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEFSIQLSVDVDVAPTMTLKL
        ELLQSPWLIELGAFCLNFKGS  GDYPS FS   S +VD APTMTL L
Subjt:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEFSIQLSVDVDVAPTMTLKL

XP_038903375.1 LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase BAH1-like [Benincasa hispida]1.6e-3053.38Show/hide
Query:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM
        CDQL+FSELMREASDIAGCFSTR                                                          VH+S+NGKNFKLK+RAEHM
Subjt:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM

Query:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEFSIQLSVDVDVAPTMTLKL
        ELLQSPWLIELGAFCLNFKG+DGGDYPS FS   SV VDVAPTMTL L
Subjt:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEFSIQLSVDVDVAPTMTLKL

TrEMBL top hitse value%identityAlignment
A0A0A0LBP6 RING-type E3 ubiquitin transferase2.8e-2850Show/hide
Query:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM
        CDQL+FSELMREASDIAGCF+TR                                                          VH+S+NGKNFKL++RAEHM
Subjt:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM

Query:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEFSIQLSVDVDVAPTMTLKL
        ELLQSPWLIELGAFCLNFKGS  GDYPS FS   S +VD APTMTL L
Subjt:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEFSIQLSVDVDVAPTMTLKL

A0A1S3B703 RING-type E3 ubiquitin transferase9.7e-2950.68Show/hide
Query:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM
        CDQL+FSELMREASDIAGCF+TR                                                          VH+S+NGKNFKLK+RAEHM
Subjt:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM

Query:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEFSIQLSVDVDVAPTMTLKL
        ELLQSPWLIELGAFCLNFKGS+ GDYPS FS     +VDVAPTMTL L
Subjt:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEFSIQLSVDVDVAPTMTLKL

A0A1S3B726 RING-type E3 ubiquitin transferase9.7e-2950.68Show/hide
Query:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM
        CDQL+FSELMREASDIAGCF+TR                                                          VH+S+NGKNFKLK+RAEHM
Subjt:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM

Query:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEFSIQLSVDVDVAPTMTLKL
        ELLQSPWLIELGAFCLNFKGS+ GDYPS FS     +VDVAPTMTL L
Subjt:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEFSIQLSVDVDVAPTMTLKL

A0A5D3DPA7 RING-type E3 ubiquitin transferase9.7e-2950.68Show/hide
Query:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM
        CDQL+FSELMREASDIAGCF+TR                                                          VH+S+NGKNFKLK+RAEHM
Subjt:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM

Query:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEFSIQLSVDVDVAPTMTLKL
        ELLQSPWLIELGAFCLNFKGS+ GDYPS FS     +VDVAPTMTL L
Subjt:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEFSIQLSVDVDVAPTMTLKL

A0A6J1DDH0 RING-type E3 ubiquitin transferase8.5e-2545.95Show/hide
Query:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM
        CDQL+F+ELMREA+DIAGCFSTR                                                          VH+S+NGK FKLK+RAE +
Subjt:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM

Query:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEFSIQLSVDVDVAPTMTLKL
        ELLQSP L+ELGAFCLNFKG D G++P+E S   SVDVDV PTMTL L
Subjt:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEFSIQLSVDVDVAPTMTLKL

SwissProt top hitse value%identityAlignment
A2XK56 Probable E3 ubiquitin-protein ligase BAH1-like 11.9e-1332.68Show/hide
Query:  CDQLYFSELMREASDIAGCFSTRV----------------------------------------------------------HNSINGKNFKLKLRAEHM
        CDQ++F+EL +EAS+IAGCFS+RV                                                          H S++G++FK K++ +H+
Subjt:  CDQLYFSELMREASDIAGCFSTRV----------------------------------------------------------HNSINGKNFKLKLRAEHM

Query:  ELLQSPWLIELGAFCLNFKGSD----GGDYPSEFSIQLSVDV-DVAPTMTLKL
        ELLQSPWLIELGAF LN   SD     G   +EF    S D+ +  P MT+ +
Subjt:  ELLQSPWLIELGAFCLNFKGSD----GGDYPSEFSIQLSVDV-DVAPTMTLKL

B8B5U8 Probable E3 ubiquitin-protein ligase BAH1-like 12.7e-0446.34Show/hide
Query:  RVHNSINGKNFKLKLRAEHMELLQSPWLIELGAFCLNFKGS
        ++H S  G+ FK + ++ H+E+LQSPWL EL AF +N + S
Subjt:  RVHNSINGKNFKLKLRAEHMELLQSPWLIELGAFCLNFKGS

Q7XI73 Probable E3 ubiquitin-protein ligase BAH1-like 22.7e-0446.34Show/hide
Query:  RVHNSINGKNFKLKLRAEHMELLQSPWLIELGAFCLNFKGS
        ++H S  G+ FK + ++ H+E+LQSPWL EL AF +N + S
Subjt:  RVHNSINGKNFKLKLRAEHMELLQSPWLIELGAFCLNFKGS

Q7XZZ3 Probable E3 ubiquitin-protein ligase BAH1-like 11.9e-1332.68Show/hide
Query:  CDQLYFSELMREASDIAGCFSTRV----------------------------------------------------------HNSINGKNFKLKLRAEHM
        CDQ++F+EL +EAS+IAGCFS+RV                                                          H S++G++FK K++ +H+
Subjt:  CDQLYFSELMREASDIAGCFSTRV----------------------------------------------------------HNSINGKNFKLKLRAEHM

Query:  ELLQSPWLIELGAFCLNFKGSD----GGDYPSEFSIQLSVDV-DVAPTMTLKL
        ELLQSPWLIELGAF LN   SD     G   +EF    S D+ +  P MT+ +
Subjt:  ELLQSPWLIELGAFCLNFKGSD----GGDYPSEFSIQLSVDV-DVAPTMTLKL

Q8GW10 Probable E3 ubiquitin-protein ligase BAH1-like1.2e-1235.38Show/hide
Query:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM
        CDQ++F ELM+EA+DIAG F +R                                                          VH+S NGKNFKLK+RAE +
Subjt:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM

Query:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEF
        ELL SPWLIELGAF LN    + G++ + F
Subjt:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEF

Arabidopsis top hitse value%identityAlignment
AT1G02860.1 SPX (SYG1/Pho81/XPR1) domain-containing protein7.4e-0546.34Show/hide
Query:  RVHNSINGKNFKLKLRAEHMELLQSPWLIELGAFCLNFKGS
        ++H S  G+ FK +++   +E+LQSPWL EL AF +N K S
Subjt:  RVHNSINGKNFKLKLRAEHMELLQSPWLIELGAFCLNFKGS

AT1G02860.2 SPX (SYG1/Pho81/XPR1) domain-containing protein7.4e-0546.34Show/hide
Query:  RVHNSINGKNFKLKLRAEHMELLQSPWLIELGAFCLNFKGS
        ++H S  G+ FK +++   +E+LQSPWL EL AF +N K S
Subjt:  RVHNSINGKNFKLKLRAEHMELLQSPWLIELGAFCLNFKGS

AT2G38920.1 SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related8.7e-1435.38Show/hide
Query:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM
        CDQ++F ELM+EA+DIAG F +R                                                          VH+S NGKNFKLK+RAE +
Subjt:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM

Query:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEF
        ELL SPWLIELGAF LN    + G++ + F
Subjt:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEF

AT2G38920.2 SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related8.7e-1435.38Show/hide
Query:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM
        CDQ++F ELM+EA+DIAG F +R                                                          VH+S NGKNFKLK+RAE +
Subjt:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM

Query:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEF
        ELL SPWLIELGAF LN    + G++ + F
Subjt:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEF

AT2G38920.3 SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related8.7e-1435.38Show/hide
Query:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM
        CDQ++F ELM+EA+DIAG F +R                                                          VH+S NGKNFKLK+RAE +
Subjt:  CDQLYFSELMREASDIAGCFSTR----------------------------------------------------------VHNSINGKNFKLKLRAEHM

Query:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEF
        ELL SPWLIELGAF LN    + G++ + F
Subjt:  ELLQSPWLIELGAFCLNFKGSDGGDYPSEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGTGATCAGTTGTATTTTTCGGAGTTAATGAGGGAAGCCTCGGATATTGCGGGATGTTTCAGCACAAGAGTACATAACTCTATAAACGGAAAGAACTTTAAGTTGAAATT
GCGAGCTGAACATATGGAGCTTTTGCAATCTCCTTGGCTTATAGAATTGGGTGCTTTTTGTTTGAATTTTAAAGGATCCGATGGTGGAGATTATCCCTCAGAATTCTCCA
TTCAGTTGTCTGTCGATGTCGATGTGGCTCCAACAATGACATTGAAATTACAAATGCCCTCTGAAGAAAAGATGTGTAAATTTGCCAATGCTATGTTATTATCTATGTAA
mRNA sequenceShow/hide mRNA sequence
TGTGATCAGTTGTATTTTTCGGAGTTAATGAGGGAAGCCTCGGATATTGCGGGATGTTTCAGCACAAGAGTACATAACTCTATAAACGGAAAGAACTTTAAGTTGAAATT
GCGAGCTGAACATATGGAGCTTTTGCAATCTCCTTGGCTTATAGAATTGGGTGCTTTTTGTTTGAATTTTAAAGGATCCGATGGTGGAGATTATCCCTCAGAATTCTCCA
TTCAGTTGTCTGTCGATGTCGATGTGGCTCCAACAATGACATTGAAATTACAAATGCCCTCTGAAGAAAAGATGTGTAAATTTGCCAATGCTATGTTATTATCTATGTAA
Protein sequenceShow/hide protein sequence
CDQLYFSELMREASDIAGCFSTRVHNSINGKNFKLKLRAEHMELLQSPWLIELGAFCLNFKGSDGGDYPSEFSIQLSVDVDVAPTMTLKLQMPSEEKMCKFANAMLLSM