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Spg015010 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015010
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTranscription factor UPBEAT1
Genome locationscaffold3:45419618..45420058
RNA-Seq ExpressionSpg015010
SyntenySpg015010
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR036638 - Helix-loop-helix DNA-binding domain superfamily
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046707.1 transcription factor UPBEAT1 [Cucumis melo var. makuwa]1.8e-2454.44Show/hide
Query:  MGVFPETLLLVQLNMKE--TTQN--TIIKERNNNNNSNESIW----------EEEEEE---AAKAKKSCN--------RRRRSSNNSLMKKRRRRSS---
        MGV  ETLL +QLNM++  TTQ+   IIKE  N++++++SIW          EEE++E     K K +CN        RRR  SN+ ++KKR RRSS   
Subjt:  MGVFPETLLLVQLNMKE--TTQN--TIIKERNNNNNSNESIW----------EEEEEE---AAKAKKSCN--------RRRRSSNNSLMKKRRRRSS---

Query:  ---ARIEQRVSTLRNLVPNTNNNNNNNEGCSVGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSASSSS
           +RIEQRV+ LRNLVPN +N+ +++E C+ GSLEQLFTQTADYILSLQTRVRLM TLVDVLS  SSS
Subjt:  ---ARIEQRVSTLRNLVPNTNNNNNNNEGCSVGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSASSSS

KAG6575752.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2362.04Show/hide
Query:  MGVFPETLLLVQLNMKETTQNTIIKERNNNNNSNESIWEEEEEEAAKAKKSCNRRRRSSNNSLMKKRRRRSSARIEQRVSTLRNLVPNTNNNNNNNEGCS
        MG FP TLLL+QLNM+E TQ+ II    N +   +S  EEE+    K  KSC RRRR+S +  + K+ RRSS RI QRV+TLRNLVPN NN+N+N+   +
Subjt:  MGVFPETLLLVQLNMKETTQNTIIKERNNNNNSNESIWEEEEEEAAKAKKSCNRRRRSSNNSLMKKRRRRSSARIEQRVSTLRNLVPNTNNNNNNNEGCS

Query:  VGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSASSS
         GSLEQLFT TADYILSLQTRVR M TLVDVLS SSS
Subjt:  VGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSASSS

KAG6593250.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3268.49Show/hide
Query:  MGVFPETLLLVQLNMKETTQNTIIKERNNNNNSNESIWEEEEEEAAKAKKSCNRRRRSSNNSLMKKRRRRSSARIEQRVSTLRNLVPNTNNNNNNNEGCS
        MGV+PETLLLVQLNMKE +Q+    E            +E++E+     KS NRRRRSS NSLMKKRR RSS RIEQRVSTLRNLVPN NNNNNN+E C 
Subjt:  MGVFPETLLLVQLNMKETTQNTIIKERNNNNNSNESIWEEEEEEAAKAKKSCNRRRRSSNNSLMKKRRRRSSARIEQRVSTLRNLVPNTNNNNNNNEGCS

Query:  VGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSASSSSSSSSNDHE
        VGSLEQLFTQTADYILSLQTRVR M  LVDVLSA      SSNDHE
Subjt:  VGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSASSSSSSSSNDHE

KAG7025601.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-3268.49Show/hide
Query:  MGVFPETLLLVQLNMKETTQNTIIKERNNNNNSNESIWEEEEEEAAKAKKSCNRRRRSSNNSLMKKRRRRSSARIEQRVSTLRNLVPNTNNNNNNNEGCS
        MGV+PETLLLVQLNMKE +Q+              S+ E+++E+     KS NRRRRSS NSLMKKRR RSS RIEQRVSTLRNLVPN NNNNNN+E C 
Subjt:  MGVFPETLLLVQLNMKETTQNTIIKERNNNNNSNESIWEEEEEEAAKAKKSCNRRRRSSNNSLMKKRRRRSSARIEQRVSTLRNLVPNTNNNNNNNEGCS

Query:  VGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSASSSSSSSSNDHE
        VGSLEQLFTQTADYILSLQTRVR M  LVDVLSA      SSNDHE
Subjt:  VGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSASSSSSSSSNDHE

XP_031744332.1 transcription factor UPBEAT1 [Cucumis sativus]5.8e-2356.36Show/hide
Query:  MGVFPETLLLVQLNMK--ETTQNTI--IKERNNNNNSNESIWEE---EEEEAAKA-------KKSCN-------RRRRSSNNSLMKKRRRR----SSARI
        MGV  ETLL +QLNM+  +TTQ+ I  IKE  NNN++++S W++   +EEE  +        K +CN       RRR  SN+ ++KKR RR    SS+RI
Subjt:  MGVFPETLLLVQLNMK--ETTQNTI--IKERNNNNNSNESIWEE---EEEEAAKA-------KKSCN-------RRRRSSNNSLMKKRRRR----SSARI

Query:  EQRVSTLRNLVPNTNNNNNN--NEGCSVGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSASSSS
        EQRV+TLR+LVPN +N+N++  +E C VGSLEQLFTQTADYILSLQTRVRLM TLVDVLS  SSS
Subjt:  EQRVSTLRNLVPNTNNNNNN--NEGCSVGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSASSSS

TrEMBL top hitse value%identityAlignment
A0A0A0K6D9 Uncharacterized protein2.8e-2356.36Show/hide
Query:  MGVFPETLLLVQLNMK--ETTQNTI--IKERNNNNNSNESIWEE---EEEEAAKA-------KKSCN-------RRRRSSNNSLMKKRRRR----SSARI
        MGV  ETLL +QLNM+  +TTQ+ I  IKE  NNN++++S W++   +EEE  +        K +CN       RRR  SN+ ++KKR RR    SS+RI
Subjt:  MGVFPETLLLVQLNMK--ETTQNTI--IKERNNNNNSNESIWEE---EEEEAAKA-------KKSCN-------RRRRSSNNSLMKKRRRR----SSARI

Query:  EQRVSTLRNLVPNTNNNNNN--NEGCSVGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSASSSS
        EQRV+TLR+LVPN +N+N++  +E C VGSLEQLFTQTADYILSLQTRVRLM TLVDVLS  SSS
Subjt:  EQRVSTLRNLVPNTNNNNNN--NEGCSVGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSASSSS

A0A151U5X8 Transcription factor bHLH151 family8.5e-0440.62Show/hide
Query:  LVQLNMKETTQNTIIKERNNNNNSNESIWEEEEEEAAKAKKSCNRRRRSSNNSLMKKR--RRRSSARIEQRVSTLRNLVPNTNNNNNNNEGCSVGSLEQL
        LV L++K+  Q T        N ++  +W   +  AA+AKK   R  R     LMK+R   RR S  I +RV TL++LVPN++         S+G L+ L
Subjt:  LVQLNMKETTQNTIIKERNNNNNSNESIWEEEEEEAAKAKKSCNRRRRSSNNSLMKKR--RRRSSARIEQRVSTLRNLVPNTNNNNNNNEGCSVGSLEQL

Query:  FTQTADYILSLQTRVRLMNTLVDVLSAS
        F +TA YILSLQTRV++M  +V VL+ S
Subjt:  FTQTADYILSLQTRVRLMNTLVDVLSAS

A0A445F6P8 Transcription factor UPBEAT15.0e-0440.29Show/hide
Query:  MGVFPETLLLVQLNMKETTQNTIIKERNNNNNSNESIWEEEEEEAAKAKKSCNRRRRSSNNSLMKKR----RRRSSARIEQRVSTLRNLVPNTNNNNNNN
        MG+  +T  LV  ++K+  Q T   E N  ++S   +W +     AK  K   R  R     LM  R    RR S   I +RV TL++LVPN++      
Subjt:  MGVFPETLLLVQLNMKETTQNTIIKERNNNNNSNESIWEEEEEEAAKAKKSCNRRRRSSNNSLMKKR----RRRSSARIEQRVSTLRNLVPNTNNNNNNN

Query:  EGCSVGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSAS
           S+G L+ LF QTADYILSLQTRVR+M  +V VL+ S
Subjt:  EGCSVGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSAS

A0A4D6N531 Myc-type8.5e-0441.27Show/hide
Query:  LVQLNMKETTQNTIIKERNNNNNSNESIWEEEEEEAAKAKKSCNRRRRSSNNSLMKKRRRRSSARIEQRVSTLRNLVPNTNNNNNNNEGCSVGSLEQLFT
        LV L++K+     +++    N NS+         + A+AKK   RRRR     LMK   RR S  I +RV TL+ L+PN++         S+G L++LF 
Subjt:  LVQLNMKETTQNTIIKERNNNNNSNESIWEEEEEEAAKAKKSCNRRRRSSNNSLMKKRRRRSSARIEQRVSTLRNLVPNTNNNNNNNEGCSVGSLEQLFT

Query:  QTADYILSLQTRVRLMNTLVDVLSAS
        QTA+YILSLQTRVR+M  +V+VL+ S
Subjt:  QTADYILSLQTRVRLMNTLVDVLSAS

A0A5A7TXU1 Transcription factor UPBEAT18.7e-2554.44Show/hide
Query:  MGVFPETLLLVQLNMKE--TTQN--TIIKERNNNNNSNESIW----------EEEEEE---AAKAKKSCN--------RRRRSSNNSLMKKRRRRSS---
        MGV  ETLL +QLNM++  TTQ+   IIKE  N++++++SIW          EEE++E     K K +CN        RRR  SN+ ++KKR RRSS   
Subjt:  MGVFPETLLLVQLNMKE--TTQN--TIIKERNNNNNSNESIW----------EEEEEE---AAKAKKSCN--------RRRRSSNNSLMKKRRRRSS---

Query:  ---ARIEQRVSTLRNLVPNTNNNNNNNEGCSVGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSASSSS
           +RIEQRV+ LRNLVPN +N+ +++E C+ GSLEQLFTQTADYILSLQTRVRLM TLVDVLS  SSS
Subjt:  ---ARIEQRVSTLRNLVPNTNNNNNNNEGCSVGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSASSSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G47270.1 sequence-specific DNA binding transcription factors;transcription regulators1.7e-0438.1Show/hide
Query:  ESIW---EEEEEEAAKAKKSCNRRRRSSNNSLMKKRRRRSSARIEQRVSTLRNLVPNTNNNNNNNEGCSVGSLEQLFTQTADYILSLQTRVRLMNTLVDV
        ESIW     +    A  KK   R R+S   S      RR    I +RV TL+ LVPNT  +           L+ LF QTADYIL+L+ +V++M T+V V
Subjt:  ESIW---EEEEEEAAKAKKSCNRRRRSSNNSLMKKRRRRSSARIEQRVSTLRNLVPNTNNNNNNNEGCSVGSLEQLFTQTADYILSLQTRVRLMNTLVDV

Query:  LSASS
        L+ ++
Subjt:  LSASS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTCTTCCCCGAAACCCTTTTGCTAGTTCAACTCAACATGAAAGAAACAACACAAAACACCATCATCAAAGAGAGAAACAACAACAACAACTCAAATGAATCCAT
ATGGGAAGAAGAAGAAGAAGAAGCTGCCAAAGCCAAAAAAAGCTGCAACAGAAGAAGAAGATCAAGCAACAACTCATTGATGAAGAAGAGAAGAAGAAGATCATCAGCTA
GAATCGAGCAAAGGGTCAGCACTTTGAGAAACCTCGTACCAAACACCAACAACAACAACAACAACAATGAGGGCTGCTCTGTTGGATCATTGGAACAGCTTTTCACTCAG
ACAGCTGATTACATATTGTCGTTGCAAACAAGAGTGAGATTGATGAACACTTTGGTTGATGTCTTGTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTAATGATCATGAGTG
A
mRNA sequenceShow/hide mRNA sequence
ATGGGAGTCTTCCCCGAAACCCTTTTGCTAGTTCAACTCAACATGAAAGAAACAACACAAAACACCATCATCAAAGAGAGAAACAACAACAACAACTCAAATGAATCCAT
ATGGGAAGAAGAAGAAGAAGAAGCTGCCAAAGCCAAAAAAAGCTGCAACAGAAGAAGAAGATCAAGCAACAACTCATTGATGAAGAAGAGAAGAAGAAGATCATCAGCTA
GAATCGAGCAAAGGGTCAGCACTTTGAGAAACCTCGTACCAAACACCAACAACAACAACAACAACAATGAGGGCTGCTCTGTTGGATCATTGGAACAGCTTTTCACTCAG
ACAGCTGATTACATATTGTCGTTGCAAACAAGAGTGAGATTGATGAACACTTTGGTTGATGTCTTGTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTAATGATCATGAGTG
A
Protein sequenceShow/hide protein sequence
MGVFPETLLLVQLNMKETTQNTIIKERNNNNNSNESIWEEEEEEAAKAKKSCNRRRRSSNNSLMKKRRRRSSARIEQRVSTLRNLVPNTNNNNNNNEGCSVGSLEQLFTQ
TADYILSLQTRVRLMNTLVDVLSASSSSSSSSNDHE